RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
TMEM248-201ENST00000341567 AKAP9Q99996 3911 aa8.24□□□□□ -1.09
TMEM248-201ENST00000341567 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
TMEM248-201ENST00000341567 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
TMEM248-201ENST00000341567 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
TMEM248-201ENST00000341567 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
TMEM248-201ENST00000341567 LINC00304Q8N9R0 145 aa8.21□□□□□ -1.09
TMEM248-201ENST00000341567 RBM12B-AS1Q9P1G2 102 aa8.21□□□□□ -1.09
TMEM248-201ENST00000341567 KRTAP4-16G5E9R7 235 aaPredicted RBP8.21□□□□□ -1.1
TMEM248-201ENST00000341567 KRTAP7-1Q8IUC3 87 aa8.19□□□□□ -1.1
TMEM248-201ENST00000341567 Q8N1X5 172 aa8.19□□□□□ -1.1
TMEM248-201ENST00000341567 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
TMEM248-201ENST00000341567 SPINK7P58062 85 aa8.18□□□□□ -1.1
TMEM248-201ENST00000341567 LCA10Q71F78 164 aa8.18□□□□□ -1.1
TMEM248-201ENST00000341567 Q75L30 129 aa8.18□□□□□ -1.1
TMEM248-201ENST00000341567 HRES1P13985 223 aa8.17□□□□□ -1.1
TMEM248-201ENST00000341567 A8MU10 97 aa8.17□□□□□ -1.1
TMEM248-201ENST00000341567 KRTAP10-1P60331 282 aa8.15□□□□□ -1.11
TMEM248-201ENST00000341567 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
TMEM248-201ENST00000341567 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
TMEM248-201ENST00000341567 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
TMEM248-201ENST00000341567 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
TMEM248-201ENST00000341567 SPRR1BP22528 89 aa8.08□□□□□ -1.12
TMEM248-201ENST00000341567 Q6ZR54 194 aa8.05□□□□□ -1.12
TMEM248-201ENST00000341567 Q6ZRN7 208 aaPredicted RBP8.05□□□□□ -1.12
TMEM248-201ENST00000341567 A0A087X002 238 aa8.04□□□□□ -1.12
TMEM248-201ENST00000341567 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
TMEM248-201ENST00000341567 FBN3Q75N90 2809 aa8.03□□□□□ -1.12
TMEM248-201ENST00000341567 Q5W150 140 aa7.99□□□□□ -1.13
TMEM248-201ENST00000341567 SPINT4Q6UDR6 99 aa7.99□□□□□ -1.13
TMEM248-201ENST00000341567 LCE6AA0A183 80 aa7.97□□□□□ -1.13
TMEM248-201ENST00000341567 J3QL48 77 aa7.97□□□□□ -1.13
TMEM248-201ENST00000341567 A0A0D9SG42 100 aa7.96□□□□□ -1.14
TMEM248-201ENST00000341567 LINC01554Q52M75 96 aa7.94□□□□□ -1.14
TMEM248-201ENST00000341567 COL7A1Q02388 2944 aa7.94□□□□□ -1.14
TMEM248-201ENST00000341567 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
TMEM248-201ENST00000341567 CSAG1Q6PB30 78 aa7.91□□□□□ -1.14
TMEM248-201ENST00000341567 CSMD3Q7Z407 3707 aa7.89□□□□□ -1.15
TMEM248-201ENST00000341567 A0A1B0GU33 70 aa7.86□□□□□ -1.15
TMEM248-201ENST00000341567 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
TMEM248-201ENST00000341567 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
TMEM248-201ENST00000341567 DMAC1Q96GE9 116 aa7.82□□□□□ -1.16
TMEM248-201ENST00000341567 A6NN06 94 aa7.81□□□□□ -1.16
TMEM248-201ENST00000341567 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
TMEM248-201ENST00000341567 H3BS24 57 aa7.8□□□□□ -1.16
TMEM248-201ENST00000341567 Q5VSD8 79 aa7.79□□□□□ -1.16
TMEM248-201ENST00000341567 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
TMEM248-201ENST00000341567 KRTAP21-3Q3LHN1 58 aa7.78□□□□□ -1.16
TMEM248-201ENST00000341567 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
TMEM248-201ENST00000341567 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
TMEM248-201ENST00000341567 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
TMEM248-201ENST00000341567 Q6ZSA8 131 aa7.67□□□□□ -1.18
TMEM248-201ENST00000341567 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
TMEM248-201ENST00000341567 ANK2Q01484 3957 aa7.53□□□□□ -1.2
TMEM248-201ENST00000341567 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
TMEM248-201ENST00000341567 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
TMEM248-201ENST00000341567 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
TMEM248-201ENST00000341567 CMYA5Q8N3K9 4069 aa7.45□□□□□ -1.22
TMEM248-201ENST00000341567 ROMO1P60602 79 aa7.44□□□□□ -1.22
TMEM248-201ENST00000341567 S4R3F8 94 aa7.44□□□□□ -1.22
TMEM248-201ENST00000341567 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
TMEM248-201ENST00000341567 HUWE1Q7Z6Z7 4374 aaKnown RBP7.4□□□□□ -1.22
TMEM248-201ENST00000341567 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
TMEM248-201ENST00000341567 M0R2T5 61 aa7.38□□□□□ -1.23
TMEM248-201ENST00000341567 DNHD1Q96M86 4753 aa7.36□□□□□ -1.23
TMEM248-201ENST00000341567 DNAH9Q9NYC9 4486 aa7.33□□□□□ -1.24
TMEM248-201ENST00000341567 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
TMEM248-201ENST00000341567 R4GN34 69 aa7.3□□□□□ -1.24
TMEM248-201ENST00000341567 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
TMEM248-201ENST00000341567 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
TMEM248-201ENST00000341567 H0YAA0 97 aa7.26□□□□□ -1.25
TMEM248-201ENST00000341567 RPS29P62273 56 aaKnown RBP7.25□□□□□ -1.25
TMEM248-201ENST00000341567 A8MUU9 505 aa7.25□□□□□ -1.25
TMEM248-201ENST00000341567 PRKDCP78527 4128 aaKnown RBP7.24□□□□□ -1.25
TMEM248-201ENST00000341567 M0QZ58 72 aa7.24□□□□□ -1.25
TMEM248-201ENST00000341567 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
TMEM248-201ENST00000341567 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
TMEM248-201ENST00000341567 NDUFAF8A1L188 74 aa7.21□□□□□ -1.26
TMEM248-201ENST00000341567 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
TMEM248-201ENST00000341567 C20orf166-AS1Q96NR2 134 aa7.18□□□□□ -1.26
TMEM248-201ENST00000341567 XP32Q5T750 250 aa7.14□□□□□ -1.27
TMEM248-201ENST00000341567 LYSTQ99698 3801 aa7.12□□□□□ -1.27
TMEM248-201ENST00000341567 DNAH10Q8IVF4 4471 aa7.12□□□□□ -1.27
TMEM248-201ENST00000341567 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
TMEM248-201ENST00000341567 PLECQ15149 4684 aaKnown RBP7.11□□□□□ -1.27
TMEM248-201ENST00000341567 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
TMEM248-201ENST00000341567 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
TMEM248-201ENST00000341567 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
TMEM248-201ENST00000341567 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
TMEM248-201ENST00000341567 DNAH7Q8WXX0 4024 aa6.99□□□□□ -1.29
TMEM248-201ENST00000341567 P0C880 135 aa6.98□□□□□ -1.29
TMEM248-201ENST00000341567 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
TMEM248-201ENST00000341567 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
TMEM248-201ENST00000341567 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
TMEM248-201ENST00000341567 DNAH5Q8TE73 4624 aa6.92□□□□□ -1.3
TMEM248-201ENST00000341567 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
TMEM248-201ENST00000341567 FAT1Q14517 4588 aa6.9□□□□□ -1.3
TMEM248-201ENST00000341567 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
TMEM248-201ENST00000341567 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
TMEM248-201ENST00000341567 TPRXLQ17RH7 258 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms