RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 PLAC8Q9NZF1 115 aa7.19□□□□□ -1.26
CDH5-201ENST00000341529 A0A087X002 238 aa7.18□□□□□ -1.26
CDH5-201ENST00000341529 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
CDH5-201ENST00000341529 SPRR1BP22528 89 aa7.17□□□□□ -1.26
CDH5-201ENST00000341529 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
CDH5-201ENST00000341529 HRES1P13985 223 aa7.16□□□□□ -1.26
CDH5-201ENST00000341529 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
CDH5-201ENST00000341529 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
CDH5-201ENST00000341529 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
CDH5-201ENST00000341529 UQCR11O14957 56 aa7.12□□□□□ -1.27
CDH5-201ENST00000341529 Q1T7F1 81 aa7.1□□□□□ -1.27
CDH5-201ENST00000341529 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
CDH5-201ENST00000341529 FBN3Q75N90 2809 aa7.1□□□□□ -1.27
CDH5-201ENST00000341529 ANK3Q12955 4377 aaKnown RBP7.09□□□□□ -1.27
CDH5-201ENST00000341529 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
CDH5-201ENST00000341529 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
CDH5-201ENST00000341529 Q5W150 140 aa7.06□□□□□ -1.28
CDH5-201ENST00000341529 Q5VV11 94 aa7.05□□□□□ -1.28
CDH5-201ENST00000341529 Q6ZR54 194 aa7.04□□□□□ -1.28
CDH5-201ENST00000341529 A0A0D9SG42 100 aa7.04□□□□□ -1.28
CDH5-201ENST00000341529 SPINK7P58062 85 aa7.03□□□□□ -1.28
CDH5-201ENST00000341529 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
CDH5-201ENST00000341529 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
CDH5-201ENST00000341529 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
CDH5-201ENST00000341529 A8MU10 97 aa6.99□□□□□ -1.29
CDH5-201ENST00000341529 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
CDH5-201ENST00000341529 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
CDH5-201ENST00000341529 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
CDH5-201ENST00000341529 KTN1-AS1Q86SY8 53 aa6.96□□□□□ -1.3
CDH5-201ENST00000341529 J3QL48 77 aa6.95□□□□□ -1.3
CDH5-201ENST00000341529 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
CDH5-201ENST00000341529 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
CDH5-201ENST00000341529 Q75L30 129 aa6.94□□□□□ -1.3
CDH5-201ENST00000341529 KRTAP13-1Q8IUC0 172 aa6.93□□□□□ -1.3
CDH5-201ENST00000341529 LCE6AA0A183 80 aa6.9□□□□□ -1.31
CDH5-201ENST00000341529 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
CDH5-201ENST00000341529 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
CDH5-201ENST00000341529 SPINT4Q6UDR6 99 aa6.87□□□□□ -1.31
CDH5-201ENST00000341529 LCA10Q71F78 164 aa6.86□□□□□ -1.31
CDH5-201ENST00000341529 A0A1B0GU33 70 aa6.85□□□□□ -1.31
CDH5-201ENST00000341529 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
CDH5-201ENST00000341529 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
CDH5-201ENST00000341529 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
CDH5-201ENST00000341529 Q5VSD8 79 aa6.81□□□□□ -1.32
CDH5-201ENST00000341529 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
CDH5-201ENST00000341529 Q6ZSA8 131 aa6.77□□□□□ -1.33
CDH5-201ENST00000341529 AKAP9Q99996 3911 aa6.77□□□□□ -1.33
CDH5-201ENST00000341529 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
CDH5-201ENST00000341529 H3BS24 57 aa6.73□□□□□ -1.33
CDH5-201ENST00000341529 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
CDH5-201ENST00000341529 ADM2Q7Z4H4 148 aa6.68□□□□□ -1.34
CDH5-201ENST00000341529 S4R3F8 94 aa6.64□□□□□ -1.35
CDH5-201ENST00000341529 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
CDH5-201ENST00000341529 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
CDH5-201ENST00000341529 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
CDH5-201ENST00000341529 DNHD1Q96M86 4753 aa6.56□□□□□ -1.36
CDH5-201ENST00000341529 A6NN06 94 aa6.55□□□□□ -1.36
CDH5-201ENST00000341529 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
CDH5-201ENST00000341529 R4GN34 69 aa6.51□□□□□ -1.37
CDH5-201ENST00000341529 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
CDH5-201ENST00000341529 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
CDH5-201ENST00000341529 M0R2T5 61 aa6.47□□□□□ -1.37
CDH5-201ENST00000341529 M0QZ58 72 aa6.46□□□□□ -1.38
CDH5-201ENST00000341529 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
CDH5-201ENST00000341529 A8MUU9 505 aa6.41□□□□□ -1.38
CDH5-201ENST00000341529 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.38
CDH5-201ENST00000341529 ROMO1P60602 79 aa6.4□□□□□ -1.39
CDH5-201ENST00000341529 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
CDH5-201ENST00000341529 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
CDH5-201ENST00000341529 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
CDH5-201ENST00000341529 XP32Q5T750 250 aa6.31□□□□□ -1.4
CDH5-201ENST00000341529 DNAH9Q9NYC9 4486 aa6.29□□□□□ -1.4
CDH5-201ENST00000341529 H0YAA0 97 aa6.29□□□□□ -1.4
CDH5-201ENST00000341529 DNAH10Q8IVF4 4471 aa6.29□□□□□ -1.4
CDH5-201ENST00000341529 PLECQ15149 4684 aaKnown RBP6.29□□□□□ -1.4
CDH5-201ENST00000341529 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
CDH5-201ENST00000341529 A0A1B0GVY2 172 aa6.25□□□□□ -1.41
CDH5-201ENST00000341529 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
CDH5-201ENST00000341529 PRKDCP78527 4128 aaKnown RBP6.21□□□□□ -1.41
CDH5-201ENST00000341529 P0C880 135 aa6.21□□□□□ -1.42
CDH5-201ENST00000341529 ANK2Q01484 3957 aa6.21□□□□□ -1.42
CDH5-201ENST00000341529 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
CDH5-201ENST00000341529 DNAH11Q96DT5 4516 aa6.19□□□□□ -1.42
CDH5-201ENST00000341529 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.43
CDH5-201ENST00000341529 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
CDH5-201ENST00000341529 KRTAP10-8P60410 259 aa6.1□□□□□ -1.43
CDH5-201ENST00000341529 FAT1Q14517 4588 aa6.09□□□□□ -1.43
CDH5-201ENST00000341529 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.43
CDH5-201ENST00000341529 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
CDH5-201ENST00000341529 LYSTQ99698 3801 aa6.08□□□□□ -1.44
CDH5-201ENST00000341529 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
CDH5-201ENST00000341529 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
CDH5-201ENST00000341529 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
CDH5-201ENST00000341529 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
CDH5-201ENST00000341529 TPRXLQ17RH7 258 aa5.98□□□□□ -1.45
CDH5-201ENST00000341529 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
CDH5-201ENST00000341529 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
CDH5-201ENST00000341529 LRP1BQ9NZR2 4599 aa5.93□□□□□ -1.46
CDH5-201ENST00000341529 KIAA1109Q2LD37 5005 aa5.91□□□□□ -1.46
CDH5-201ENST00000341529 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms