RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KRTAP13-1Q8IUC0 172 aa5.68□□□□□ -1.5
TRERF1-201ENST00000340840 RETNLBQ9BQ08 111 aa5.67□□□□□ -1.5
TRERF1-201ENST00000340840 LINC00313P59037 77 aa5.67□□□□□ -1.5
TRERF1-201ENST00000340840 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
TRERF1-201ENST00000340840 A0A1B0GU69 56 aa5.66□□□□□ -1.5
TRERF1-201ENST00000340840 PRR26Q8N8Z3 221 aa5.66□□□□□ -1.5
TRERF1-201ENST00000340840 Q96NJ1 140 aa5.65□□□□□ -1.5
TRERF1-201ENST00000340840 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
TRERF1-201ENST00000340840 C7orf65Q6ZTY9 151 aa5.64□□□□□ -1.51
TRERF1-201ENST00000340840 LCA10Q71F78 164 aa5.64□□□□□ -1.51
TRERF1-201ENST00000340840 A8MU10 97 aa5.64□□□□□ -1.51
TRERF1-201ENST00000340840 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
TRERF1-201ENST00000340840 IGKV2D-30A0A075B6S6 120 aa5.62□□□□□ -1.51
TRERF1-201ENST00000340840 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
TRERF1-201ENST00000340840 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
TRERF1-201ENST00000340840 ASB16-AS1Q495Z4 193 aa5.61□□□□□ -1.51
TRERF1-201ENST00000340840 SPINK7P58062 85 aa5.61□□□□□ -1.51
TRERF1-201ENST00000340840 A0A087X002 238 aa5.6□□□□□ -1.51
TRERF1-201ENST00000340840 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
TRERF1-201ENST00000340840 PLA2G1BP04054 148 aaKnown RBP5.59□□□□□ -1.52
TRERF1-201ENST00000340840 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.52
TRERF1-201ENST00000340840 UQCR11O14957 56 aa5.56□□□□□ -1.52
TRERF1-201ENST00000340840 Q5W150 140 aa5.56□□□□□ -1.52
TRERF1-201ENST00000340840 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
TRERF1-201ENST00000340840 A6NN06 94 aa5.55□□□□□ -1.52
TRERF1-201ENST00000340840 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
TRERF1-201ENST00000340840 SPINK1P00995 79 aa5.53□□□□□ -1.52
TRERF1-201ENST00000340840 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
TRERF1-201ENST00000340840 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
TRERF1-201ENST00000340840 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
TRERF1-201ENST00000340840 MEGF8Q7Z7M0 2845 aa5.45□□□□□ -1.54
TRERF1-201ENST00000340840 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
TRERF1-201ENST00000340840 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
TRERF1-201ENST00000340840 K7ERS5 55 aa5.41□□□□□ -1.54
TRERF1-201ENST00000340840 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
TRERF1-201ENST00000340840 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
TRERF1-201ENST00000340840 Q5VSD8 79 aa5.4□□□□□ -1.54
TRERF1-201ENST00000340840 Q8N1X5 172 aa5.4□□□□□ -1.54
TRERF1-201ENST00000340840 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
TRERF1-201ENST00000340840 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
TRERF1-201ENST00000340840 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
TRERF1-201ENST00000340840 LINC01554Q52M75 96 aa5.36□□□□□ -1.55
TRERF1-201ENST00000340840 COL7A1Q02388 2944 aa5.35□□□□□ -1.55
TRERF1-201ENST00000340840 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.56
TRERF1-201ENST00000340840 DNHD1Q96M86 4753 aa5.34□□□□□ -1.56
TRERF1-201ENST00000340840 H3BS24 57 aa5.33□□□□□ -1.56
TRERF1-201ENST00000340840 C9orf92A6NGG3 77 aa5.3□□□□□ -1.56
TRERF1-201ENST00000340840 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
TRERF1-201ENST00000340840 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
TRERF1-201ENST00000340840 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
TRERF1-201ENST00000340840 A0A1B0GU33 70 aa5.28□□□□□ -1.56
TRERF1-201ENST00000340840 Q6ZSA8 131 aa5.26□□□□□ -1.57
TRERF1-201ENST00000340840 KRTAP1-4P0C5Y4 121 aa5.25□□□□□ -1.57
TRERF1-201ENST00000340840 DNAH10Q8IVF4 4471 aa5.25□□□□□ -1.57
TRERF1-201ENST00000340840 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
TRERF1-201ENST00000340840 CSMD3Q7Z407 3707 aa5.21□□□□□ -1.57
TRERF1-201ENST00000340840 ANK2Q01484 3957 aa5.19□□□□□ -1.58
TRERF1-201ENST00000340840 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
TRERF1-201ENST00000340840 DNAH1Q9P2D7 4330 aa5.18□□□□□ -1.58
TRERF1-201ENST00000340840 DNAH9Q9NYC9 4486 aa5.16□□□□□ -1.58
TRERF1-201ENST00000340840 DNAH3Q8TD57 4116 aa5.14□□□□□ -1.59
TRERF1-201ENST00000340840 A8MUU9 505 aa5.14□□□□□ -1.59
TRERF1-201ENST00000340840 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
TRERF1-201ENST00000340840 C20orf166-AS1Q96NR2 134 aa5.13□□□□□ -1.59
TRERF1-201ENST00000340840 PRKDCP78527 4128 aaKnown RBP5.13□□□□□ -1.59
TRERF1-201ENST00000340840 PLECQ15149 4684 aaKnown RBP5.13□□□□□ -1.59
TRERF1-201ENST00000340840 H0YAA0 97 aa5.11□□□□□ -1.59
TRERF1-201ENST00000340840 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
TRERF1-201ENST00000340840 CMYA5Q8N3K9 4069 aa5.08□□□□□ -1.6
TRERF1-201ENST00000340840 A0A0D9SG42 100 aa5.08□□□□□ -1.6
TRERF1-201ENST00000340840 A0A1B0GVY2 172 aa5.06□□□□□ -1.6
TRERF1-201ENST00000340840 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
TRERF1-201ENST00000340840 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
TRERF1-201ENST00000340840 CRIPTQ9P021 101 aa5.05□□□□□ -1.6
TRERF1-201ENST00000340840 DNAH8Q96JB1 4490 aa5.04□□□□□ -1.6
TRERF1-201ENST00000340840 ROMO1P60602 79 aa5.04□□□□□ -1.6
TRERF1-201ENST00000340840 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
TRERF1-201ENST00000340840 DNAH17Q9UFH2 4485 aa5.03□□□□□ -1.6
TRERF1-201ENST00000340840 S4R3F8 94 aa5.01□□□□□ -1.61
TRERF1-201ENST00000340840 LYSTQ99698 3801 aa5□□□□□ -1.61
TRERF1-201ENST00000340840 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
TRERF1-201ENST00000340840 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
TRERF1-201ENST00000340840 DYNC2H1Q8NCM8 4307 aaKnown RBP4.97□□□□□ -1.61
TRERF1-201ENST00000340840 M0R2T5 61 aa4.94□□□□□ -1.62
TRERF1-201ENST00000340840 DNAH11Q96DT5 4516 aa4.94□□□□□ -1.62
TRERF1-201ENST00000340840 ALMS1Q8TCU4 4167 aa4.93□□□□□ -1.62
TRERF1-201ENST00000340840 DNAH7Q8WXX0 4024 aa4.92□□□□□ -1.62
TRERF1-201ENST00000340840 DNAH2Q9P225 4427 aa4.91□□□□□ -1.62
TRERF1-201ENST00000340840 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
TRERF1-201ENST00000340840 HECTD4Q9Y4D8 3996 aa4.88□□□□□ -1.63
TRERF1-201ENST00000340840 FRAS1Q86XX4 4008 aa4.88□□□□□ -1.63
TRERF1-201ENST00000340840 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
TRERF1-201ENST00000340840 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
TRERF1-201ENST00000340840 KMT2AQ03164 3969 aa4.86□□□□□ -1.63
TRERF1-201ENST00000340840 XP32Q5T750 250 aa4.83□□□□□ -1.64
TRERF1-201ENST00000340840 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
TRERF1-201ENST00000340840 DNAH5Q8TE73 4624 aa4.8□□□□□ -1.64
TRERF1-201ENST00000340840 P0C880 135 aa4.79□□□□□ -1.64
TRERF1-201ENST00000340840 M0QZ58 72 aa4.79□□□□□ -1.64
TRERF1-201ENST00000340840 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms