RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 C3orf79P0CE67 100 aa4.05□□□□□ -1.76
ATXN3-201ENST00000340660 SPANXCQ9NY87 97 aa4.04□□□□□ -1.76
ATXN3-201ENST00000340660 MT1GP13640 62 aa4.03□□□□□ -1.76
ATXN3-201ENST00000340660 SRP19P09132 144 aaKnown RBP4.02□□□□□ -1.77
ATXN3-201ENST00000340660 NMUP48645 174 aa4.02□□□□□ -1.77
ATXN3-201ENST00000340660 IFITM2Q01629 132 aa4.01□□□□□ -1.77
ATXN3-201ENST00000340660 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
ATXN3-201ENST00000340660 MT1MQ8N339 61 aa4□□□□□ -1.77
ATXN3-201ENST00000340660 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
ATXN3-201ENST00000340660 DEFB116Q30KQ4 102 aa3.99□□□□□ -1.77
ATXN3-201ENST00000340660 S100ZQ8WXG8 99 aa3.99□□□□□ -1.77
ATXN3-201ENST00000340660 IGKV3D-7A0A0C4DH55 119 aa3.98□□□□□ -1.77
ATXN3-201ENST00000340660 S4R3F8 94 aa3.98□□□□□ -1.77
ATXN3-201ENST00000340660 Q6ZQY7 126 aa3.97□□□□□ -1.77
ATXN3-201ENST00000340660 NAT8Q9UHE5 227 aa3.97□□□□□ -1.77
ATXN3-201ENST00000340660 A4D1N5 150 aa3.96□□□□□ -1.78
ATXN3-201ENST00000340660 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
ATXN3-201ENST00000340660 DSCR8Q96T75 97 aa3.96□□□□□ -1.78
ATXN3-201ENST00000340660 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
ATXN3-201ENST00000340660 LINC00308Q8TCZ7 52 aa3.95□□□□□ -1.78
ATXN3-201ENST00000340660 LEPROTO15243 131 aa3.94□□□□□ -1.78
ATXN3-201ENST00000340660 PDE6GP18545 87 aa3.94□□□□□ -1.78
ATXN3-201ENST00000340660 SMCO4Q9NRQ5 59 aa3.94□□□□□ -1.78
ATXN3-201ENST00000340660 A8MUN3 132 aa3.93□□□□□ -1.78
ATXN3-201ENST00000340660 LYRM7Q5U5X0 104 aa3.93□□□□□ -1.78
ATXN3-201ENST00000340660 PMCHL1Q16048 86 aa3.92□□□□□ -1.78
ATXN3-201ENST00000340660 J3QQQ9 107 aa3.91□□□□□ -1.78
ATXN3-201ENST00000340660 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
ATXN3-201ENST00000340660 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
ATXN3-201ENST00000340660 C4orf26Q17RF5 130 aa3.9□□□□□ -1.79
ATXN3-201ENST00000340660 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
ATXN3-201ENST00000340660 C9JQL5 133 aa3.88□□□□□ -1.79
ATXN3-201ENST00000340660 RAB37Q96AX2 223 aa3.88□□□□□ -1.79
ATXN3-201ENST00000340660 TRAV12-1A0A0B4J245 112 aa3.87□□□□□ -1.79
ATXN3-201ENST00000340660 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
ATXN3-201ENST00000340660 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
ATXN3-201ENST00000340660 hADV29S1A0JD25 119 aa3.84□□□□□ -1.79
ATXN3-201ENST00000340660 SERF1AO75920 110 aa3.83□□□□□ -1.8
ATXN3-201ENST00000340660 NDUFV3P56181 108 aaKnown RBP3.82□□□□□ -1.8
ATXN3-201ENST00000340660 SMIM11BQ8TCY0 68 aa3.82□□□□□ -1.8
ATXN3-201ENST00000340660 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
ATXN3-201ENST00000340660 OCR1Q9BZK8 76 aa3.82□□□□□ -1.8
ATXN3-201ENST00000340660 A6NDN8 102 aa3.81□□□□□ -1.8
ATXN3-201ENST00000340660 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
ATXN3-201ENST00000340660 SLC51BQ86UW2 128 aa3.79□□□□□ -1.8
ATXN3-201ENST00000340660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-201ENST00000340660 LINC00614P0C842 121 aa3.77□□□□□ -1.81
ATXN3-201ENST00000340660 IFI27L1Q96BM0 104 aa3.77□□□□□ -1.81
ATXN3-201ENST00000340660 Q5W150 140 aa3.76□□□□□ -1.81
ATXN3-201ENST00000340660 C7orf65Q6ZTY9 151 aa3.76□□□□□ -1.81
ATXN3-201ENST00000340660 K7EQZ3 153 aa3.74□□□□□ -1.81
ATXN3-201ENST00000340660 MT1LQ93083 61 aa3.74□□□□□ -1.81
ATXN3-201ENST00000340660 TIMM17BO60830 172 aa3.73□□□□□ -1.81
ATXN3-201ENST00000340660 C2orf91Q6ZV80 131 aa3.72□□□□□ -1.81
ATXN3-201ENST00000340660 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.82
ATXN3-201ENST00000340660 HERVK_113P61574 105 aa3.7□□□□□ -1.82
ATXN3-201ENST00000340660 VAMP3Q15836 100 aa3.7□□□□□ -1.82
ATXN3-201ENST00000340660 C18orf32Q8TCD1 76 aa3.69□□□□□ -1.82
ATXN3-201ENST00000340660 TRBV7-4A0A0J9YYF1 115 aa3.68□□□□□ -1.82
ATXN3-201ENST00000340660 H0Y8G0 127 aa3.68□□□□□ -1.82
ATXN3-201ENST00000340660 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
ATXN3-201ENST00000340660 C8orf17Q9NRJ1 99 aa3.68□□□□□ -1.82
ATXN3-201ENST00000340660 H3BMG7 143 aa3.67□□□□□ -1.82
ATXN3-201ENST00000340660 MT-ND4LP03901 98 aa3.66□□□□□ -1.82
ATXN3-201ENST00000340660 FABP9Q0Z7S8 132 aa3.65□□□□□ -1.83
ATXN3-201ENST00000340660 PLNP26678 52 aa3.64□□□□□ -1.83
ATXN3-201ENST00000340660 Q6ZVQ6 151 aa3.64□□□□□ -1.83
ATXN3-201ENST00000340660 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
ATXN3-201ENST00000340660 TCTE3Q8IZS6 198 aa3.63□□□□□ -1.83
ATXN3-201ENST00000340660 SEC11CQ9BY50 192 aa3.63□□□□□ -1.83
ATXN3-201ENST00000340660 HSPB8Q9UJY1 196 aa3.63□□□□□ -1.83
ATXN3-201ENST00000340660 E9PLD3 99 aa3.61□□□□□ -1.83
ATXN3-201ENST00000340660 PEA15Q15121 130 aa3.61□□□□□ -1.83
ATXN3-201ENST00000340660 ADM2Q7Z4H4 148 aa3.61□□□□□ -1.83
ATXN3-201ENST00000340660 PMCHL2Q9BQD1 86 aa3.61□□□□□ -1.83
ATXN3-201ENST00000340660 DPM2O94777 84 aa3.59□□□□□ -1.83
ATXN3-201ENST00000340660 C12orf57Q99622 126 aa3.59□□□□□ -1.83
ATXN3-201ENST00000340660 A0A087WVE0 104 aa3.58□□□□□ -1.84
ATXN3-201ENST00000340660 TRGC2P03986 189 aa3.57□□□□□ -1.84
ATXN3-201ENST00000340660 R4GN34 69 aa3.57□□□□□ -1.84
ATXN3-201ENST00000340660 IGKCP01834 107 aa3.56□□□□□ -1.84
ATXN3-201ENST00000340660 TTTY13Q9BZ97 58 aa3.56□□□□□ -1.84
ATXN3-201ENST00000340660 J3KT08 172 aa3.54□□□□□ -1.84
ATXN3-201ENST00000340660 NDUFB1O75438 58 aa3.54□□□□□ -1.84
ATXN3-201ENST00000340660 TRACP01848 142 aa3.54□□□□□ -1.84
ATXN3-201ENST00000340660 LINC01554Q52M75 96 aa3.54□□□□□ -1.84
ATXN3-201ENST00000340660 MUSTN1Q8IVN3 82 aa3.54□□□□□ -1.84
ATXN3-201ENST00000340660 ANKRD29Q8N6D5 301 aa3.54□□□□□ -1.84
ATXN3-201ENST00000340660 MRPL34Q9BQ48 92 aaKnown RBP3.53□□□□□ -1.84
ATXN3-201ENST00000340660 IFITM1P13164 125 aa3.52□□□□□ -1.85
ATXN3-201ENST00000340660 M0QZ58 72 aa3.51□□□□□ -1.85
ATXN3-201ENST00000340660 CCKP06307 115 aa3.51□□□□□ -1.85
ATXN3-201ENST00000340660 A0A1B0GV72 72 aa3.5□□□□□ -1.85
ATXN3-201ENST00000340660 NDUFS5O43920 106 aa3.5□□□□□ -1.85
ATXN3-201ENST00000340660 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
ATXN3-201ENST00000340660 COPS9Q8WXC6 57 aa3.5□□□□□ -1.85
ATXN3-201ENST00000340660 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
ATXN3-201ENST00000340660 COX19Q49B96 90 aa3.48□□□□□ -1.85
ATXN3-201ENST00000340660 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
ATXN3-201ENST00000340660 FABP2P12104 132 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms