RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 LINC00313P59037 77 aa8.1□□□□□ -1.11
UBE3B-201ENST00000340074 K7EP34 96 aa8.09□□□□□ -1.11
UBE3B-201ENST00000340074 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
UBE3B-201ENST00000340074 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
UBE3B-201ENST00000340074 NOTCH2NLQ7Z3S9 236 aa8.08□□□□□ -1.12
UBE3B-201ENST00000340074 A8MUU9 505 aa8.07□□□□□ -1.12
UBE3B-201ENST00000340074 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
UBE3B-201ENST00000340074 J3KT08 172 aa8.06□□□□□ -1.12
UBE3B-201ENST00000340074 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
UBE3B-201ENST00000340074 KRTAP16-1A8MUX0 517 aa8.05□□□□□ -1.12
UBE3B-201ENST00000340074 PRO0461Q9UI25 63 aa8.05□□□□□ -1.12
UBE3B-201ENST00000340074 LCE2AQ5TA79 106 aaPredicted RBP8.03□□□□□ -1.12
UBE3B-201ENST00000340074 C8orf87E5RJ46 101 aa8.02□□□□□ -1.13
UBE3B-201ENST00000340074 NREPQ16612 68 aa8.02□□□□□ -1.13
UBE3B-201ENST00000340074 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
UBE3B-201ENST00000340074 NDUFB1O75438 58 aa8□□□□□ -1.13
UBE3B-201ENST00000340074 A8MWP4 228 aa7.99□□□□□ -1.13
UBE3B-201ENST00000340074 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
UBE3B-201ENST00000340074 IGKV3D-7A0A0C4DH55 119 aa7.97□□□□□ -1.13
UBE3B-201ENST00000340074 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
UBE3B-201ENST00000340074 F8W1H4 67 aa7.95□□□□□ -1.14
UBE3B-201ENST00000340074 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
UBE3B-201ENST00000340074 PRR15Q8IV56 129 aa7.93□□□□□ -1.14
UBE3B-201ENST00000340074 Q6ZVQ6 151 aa7.91□□□□□ -1.14
UBE3B-201ENST00000340074 BPY2O14599 106 aa7.89□□□□□ -1.15
UBE3B-201ENST00000340074 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
UBE3B-201ENST00000340074 K7EQZ3 153 aa7.88□□□□□ -1.15
UBE3B-201ENST00000340074 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
UBE3B-201ENST00000340074 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
UBE3B-201ENST00000340074 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
UBE3B-201ENST00000340074 MMP24-AS1A0A0U1RRL7 71 aa7.86□□□□□ -1.15
UBE3B-201ENST00000340074 MT1HP80294 61 aa7.85□□□□□ -1.15
UBE3B-201ENST00000340074 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
UBE3B-201ENST00000340074 UBL5Q9BZL1 73 aa7.84□□□□□ -1.15
UBE3B-201ENST00000340074 LCE2BO14633 110 aa7.82□□□□□ -1.16
UBE3B-201ENST00000340074 Q8N9L7 120 aa7.82□□□□□ -1.16
UBE3B-201ENST00000340074 TMEM254Q8TBM7 123 aa7.82□□□□□ -1.16
UBE3B-201ENST00000340074 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
UBE3B-201ENST00000340074 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
UBE3B-201ENST00000340074 FLGP20930 4061 aaPredicted RBP7.77□□□□□ -1.17
UBE3B-201ENST00000340074 A0A1B0GV90 55 aa7.76□□□□□ -1.17
UBE3B-201ENST00000340074 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
UBE3B-201ENST00000340074 NDUFS5O43920 106 aa7.75□□□□□ -1.17
UBE3B-201ENST00000340074 HRES1P13985 223 aa7.75□□□□□ -1.17
UBE3B-201ENST00000340074 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
UBE3B-201ENST00000340074 SPINK7P58062 85 aa7.73□□□□□ -1.17
UBE3B-201ENST00000340074 KRTAP9-2Q9BYQ4 174 aa7.73□□□□□ -1.17
UBE3B-201ENST00000340074 M0R2T5 61 aa7.71□□□□□ -1.17
UBE3B-201ENST00000340074 MPLKIPQ8TAP9 179 aa7.71□□□□□ -1.17
UBE3B-201ENST00000340074 RBM12B-AS1Q9P1G2 102 aa7.7□□□□□ -1.18
UBE3B-201ENST00000340074 CXCL6P80162 114 aa7.69□□□□□ -1.18
UBE3B-201ENST00000340074 FAM236DA0A1B0GTK5 79 aa7.69□□□□□ -1.18
UBE3B-201ENST00000340074 HCG22E2RYF7 251 aa7.69□□□□□ -1.18
UBE3B-201ENST00000340074 ACYP1P07311 99 aa7.69□□□□□ -1.18
UBE3B-201ENST00000340074 FAM236CP0DP71 79 aa7.69□□□□□ -1.18
UBE3B-201ENST00000340074 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
UBE3B-201ENST00000340074 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
UBE3B-201ENST00000340074 Q5W150 140 aa7.66□□□□□ -1.18
UBE3B-201ENST00000340074 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
UBE3B-201ENST00000340074 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
UBE3B-201ENST00000340074 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
UBE3B-201ENST00000340074 IGKV2-30P06310 120 aa7.58□□□□□ -1.2
UBE3B-201ENST00000340074 ATP5EP2Q5VTU8 51 aa7.56□□□□□ -1.2
UBE3B-201ENST00000340074 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
UBE3B-201ENST00000340074 TP53AIP1Q9HCN2 124 aa7.52□□□□□ -1.2
UBE3B-201ENST00000340074 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
UBE3B-201ENST00000340074 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
UBE3B-201ENST00000340074 J3QR89 54 aa7.46□□□□□ -1.21
UBE3B-201ENST00000340074 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.21
UBE3B-201ENST00000340074 A0A087WVE0 104 aa7.44□□□□□ -1.22
UBE3B-201ENST00000340074 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
UBE3B-201ENST00000340074 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
UBE3B-201ENST00000340074 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
UBE3B-201ENST00000340074 MT2AP02795 61 aa7.36□□□□□ -1.23
UBE3B-201ENST00000340074 UQCRQO14949 82 aa7.35□□□□□ -1.23
UBE3B-201ENST00000340074 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
UBE3B-201ENST00000340074 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
UBE3B-201ENST00000340074 LOC101927531A0A1B0GV80 90 aa7.32□□□□□ -1.24
UBE3B-201ENST00000340074 H0Y9P7 68 aa7.32□□□□□ -1.24
UBE3B-201ENST00000340074 MT1FP04733 61 aa7.32□□□□□ -1.24
UBE3B-201ENST00000340074 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
UBE3B-201ENST00000340074 ATOX1O00244 68 aa7.29□□□□□ -1.24
UBE3B-201ENST00000340074 K7ERU9 68 aa7.28□□□□□ -1.24
UBE3B-201ENST00000340074 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
UBE3B-201ENST00000340074 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
UBE3B-201ENST00000340074 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
UBE3B-201ENST00000340074 S4R3F8 94 aa7.23□□□□□ -1.25
UBE3B-201ENST00000340074 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
UBE3B-201ENST00000340074 LINC00208Q96KT6 92 aa7.22□□□□□ -1.25
UBE3B-201ENST00000340074 MT-ATP8P03928 68 aa7.21□□□□□ -1.25
UBE3B-201ENST00000340074 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.25
UBE3B-201ENST00000340074 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
UBE3B-201ENST00000340074 C5orf47Q569G3 176 aa7.2□□□□□ -1.26
UBE3B-201ENST00000340074 IMUPQ9GZP8 106 aa7.2□□□□□ -1.26
UBE3B-201ENST00000340074 MP68P56378 58 aa7.19□□□□□ -1.26
UBE3B-201ENST00000340074 LCA10Q71F78 164 aa7.19□□□□□ -1.26
UBE3B-201ENST00000340074 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
UBE3B-201ENST00000340074 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
UBE3B-201ENST00000340074 H3BPC8 53 aa7.11□□□□□ -1.27
UBE3B-201ENST00000340074 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms