RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 Q6ZRN7 208 aaPredicted RBP8.78□□□□□ -1
RET-201ENST00000340058 A0A087X002 238 aa8.76□□□□□ -1.01
RET-201ENST00000340058 HRES1P13985 223 aa8.74□□□□□ -1.01
RET-201ENST00000340058 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
RET-201ENST00000340058 FP248Q71RG6 208 aaPredicted RBP8.73□□□□□ -1.01
RET-201ENST00000340058 CD164Q04900 197 aa8.71□□□□□ -1.01
RET-201ENST00000340058 SPANXA2-OT1Q8N9U9 137 aa8.7□□□□□ -1.02
RET-201ENST00000340058 UQCR11O14957 56 aa8.66□□□□□ -1.02
RET-201ENST00000340058 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
RET-201ENST00000340058 LCE6AA0A183 80 aa8.65□□□□□ -1.02
RET-201ENST00000340058 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.03
RET-201ENST00000340058 Q5W150 140 aa8.63□□□□□ -1.03
RET-201ENST00000340058 COX6B2Q6YFQ2 88 aa8.62□□□□□ -1.03
RET-201ENST00000340058 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
RET-201ENST00000340058 A0A0D9SG42 100 aa8.61□□□□□ -1.03
RET-201ENST00000340058 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
RET-201ENST00000340058 VPS13CQ709C8 3753 aa8.6□□□□□ -1.03
RET-201ENST00000340058 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.03
RET-201ENST00000340058 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
RET-201ENST00000340058 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
RET-201ENST00000340058 Q5VSD8 79 aa8.56□□□□□ -1.04
RET-201ENST00000340058 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
RET-201ENST00000340058 SPINK7P58062 85 aa8.53□□□□□ -1.04
RET-201ENST00000340058 Q1T7F1 81 aa8.52□□□□□ -1.05
RET-201ENST00000340058 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
RET-201ENST00000340058 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
RET-201ENST00000340058 Q6ZSA8 131 aa8.48□□□□□ -1.05
RET-201ENST00000340058 COL7A1Q02388 2944 aa8.45□□□□□ -1.06
RET-201ENST00000340058 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
RET-201ENST00000340058 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
RET-201ENST00000340058 Q5VV11 94 aa8.43□□□□□ -1.06
RET-201ENST00000340058 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
RET-201ENST00000340058 ANK3Q12955 4377 aaKnown RBP8.41□□□□□ -1.06
RET-201ENST00000340058 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
RET-201ENST00000340058 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
RET-201ENST00000340058 A0A1B0GU33 70 aa8.36□□□□□ -1.07
RET-201ENST00000340058 Q75L30 129 aa8.35□□□□□ -1.07
RET-201ENST00000340058 MEGF8Q7Z7M0 2845 aa8.3□□□□□ -1.08
RET-201ENST00000340058 KTN1-AS1Q86SY8 53 aa8.29□□□□□ -1.08
RET-201ENST00000340058 DMAC1Q96GE9 116 aa8.29□□□□□ -1.08
RET-201ENST00000340058 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
RET-201ENST00000340058 A8MU10 97 aa8.28□□□□□ -1.08
RET-201ENST00000340058 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
RET-201ENST00000340058 S4R3F8 94 aa8.21□□□□□ -1.1
RET-201ENST00000340058 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
RET-201ENST00000340058 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
RET-201ENST00000340058 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
RET-201ENST00000340058 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
RET-201ENST00000340058 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
RET-201ENST00000340058 M0R2T5 61 aa8.17□□□□□ -1.1
RET-201ENST00000340058 LCA10Q71F78 164 aa8.17□□□□□ -1.1
RET-201ENST00000340058 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
RET-201ENST00000340058 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
RET-201ENST00000340058 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
RET-201ENST00000340058 R4GN34 69 aa8.05□□□□□ -1.12
RET-201ENST00000340058 H1FX-AS1Q4G0G2 97 aa8.01□□□□□ -1.13
RET-201ENST00000340058 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
RET-201ENST00000340058 RPS29P62273 56 aaKnown RBP7.99□□□□□ -1.13
RET-201ENST00000340058 M0QZ58 72 aa7.97□□□□□ -1.13
RET-201ENST00000340058 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
RET-201ENST00000340058 A8MUU9 505 aa7.92□□□□□ -1.14
RET-201ENST00000340058 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
RET-201ENST00000340058 A6NN06 94 aa7.86□□□□□ -1.15
RET-201ENST00000340058 KRTAP16-1A8MUX0 517 aa7.86□□□□□ -1.15
RET-201ENST00000340058 XP32Q5T750 250 aa7.83□□□□□ -1.16
RET-201ENST00000340058 AKAP9Q99996 3911 aa7.82□□□□□ -1.16
RET-201ENST00000340058 ROMO1P60602 79 aa7.76□□□□□ -1.17
RET-201ENST00000340058 A0A1B0GVY2 172 aa7.75□□□□□ -1.17
RET-201ENST00000340058 HUWE1Q7Z6Z7 4374 aaKnown RBP7.73□□□□□ -1.17
RET-201ENST00000340058 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
RET-201ENST00000340058 H3BS24 57 aa7.72□□□□□ -1.17
RET-201ENST00000340058 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
RET-201ENST00000340058 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
RET-201ENST00000340058 H0YAA0 97 aa7.58□□□□□ -1.2
RET-201ENST00000340058 P0C880 135 aa7.57□□□□□ -1.2
RET-201ENST00000340058 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
RET-201ENST00000340058 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
RET-201ENST00000340058 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
RET-201ENST00000340058 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
RET-201ENST00000340058 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
RET-201ENST00000340058 DNAH9Q9NYC9 4486 aa7.48□□□□□ -1.21
RET-201ENST00000340058 PLECQ15149 4684 aaKnown RBP7.45□□□□□ -1.22
RET-201ENST00000340058 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
RET-201ENST00000340058 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
RET-201ENST00000340058 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.23
RET-201ENST00000340058 DNAH5Q8TE73 4624 aa7.33□□□□□ -1.24
RET-201ENST00000340058 KRTAP4-5Q9BYR2 181 aa7.31□□□□□ -1.24
RET-201ENST00000340058 FAT1Q14517 4588 aa7.28□□□□□ -1.24
RET-201ENST00000340058 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
RET-201ENST00000340058 PRKDCP78527 4128 aaKnown RBP7.26□□□□□ -1.25
RET-201ENST00000340058 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
RET-201ENST00000340058 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
RET-201ENST00000340058 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
RET-201ENST00000340058 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
RET-201ENST00000340058 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
RET-201ENST00000340058 TNP1P09430 55 aa7.19□□□□□ -1.26
RET-201ENST00000340058 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
RET-201ENST00000340058 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
RET-201ENST00000340058 LYSTQ99698 3801 aa7.11□□□□□ -1.27
RET-201ENST00000340058 ANK2Q01484 3957 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms