RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 Q96NJ1 140 aa5.6□□□□□ -1.51
CAPN3-202ENST00000337571 SS18L2Q9UHA2 77 aa5.6□□□□□ -1.51
CAPN3-202ENST00000337571 H0YGX0 51 aa5.58□□□□□ -1.52
CAPN3-202ENST00000337571 SCGB1C2P0DMR2 95 aa5.58□□□□□ -1.52
CAPN3-202ENST00000337571 GTF2H5Q6ZYL4 71 aa5.58□□□□□ -1.52
CAPN3-202ENST00000337571 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
CAPN3-202ENST00000337571 TRBV20-1A0A075B6N2 111 aa5.57□□□□□ -1.52
CAPN3-202ENST00000337571 TEN1Q86WV5 123 aa5.57□□□□□ -1.52
CAPN3-202ENST00000337571 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
CAPN3-202ENST00000337571 ATXN8Q156A1 80 aa5.55□□□□□ -1.52
CAPN3-202ENST00000337571 COX6CP09669 75 aa5.54□□□□□ -1.52
CAPN3-202ENST00000337571 LYRM7Q5U5X0 104 aa5.54□□□□□ -1.52
CAPN3-202ENST00000337571 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-202ENST00000337571 C9JAW5 83 aa5.53□□□□□ -1.52
CAPN3-202ENST00000337571 TRACP01848 142 aa5.53□□□□□ -1.52
CAPN3-202ENST00000337571 F8W1H4 67 aa5.52□□□□□ -1.53
CAPN3-202ENST00000337571 A0A087WSZ3 146 aa5.51□□□□□ -1.53
CAPN3-202ENST00000337571 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
CAPN3-202ENST00000337571 A0A1B0GX51 115 aa5.5□□□□□ -1.53
CAPN3-202ENST00000337571 A8MUU9 505 aa5.49□□□□□ -1.53
CAPN3-202ENST00000337571 ETDBQ3ZM63 59 aa5.49□□□□□ -1.53
CAPN3-202ENST00000337571 ANKRD29Q8N6D5 301 aa5.49□□□□□ -1.53
CAPN3-202ENST00000337571 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
CAPN3-202ENST00000337571 SIGMAR1Q99720 223 aa5.48□□□□□ -1.53
CAPN3-202ENST00000337571 H3BT86 120 aa5.47□□□□□ -1.53
CAPN3-202ENST00000337571 DNAL4O96015 105 aa5.47□□□□□ -1.53
CAPN3-202ENST00000337571 DSCR10P59022 87 aa5.47□□□□□ -1.53
CAPN3-202ENST00000337571 LINC00313P59037 77 aa5.47□□□□□ -1.53
CAPN3-202ENST00000337571 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
CAPN3-202ENST00000337571 H3BQ85 93 aa5.46□□□□□ -1.54
CAPN3-202ENST00000337571 IGKV4-1P06312 121 aa5.45□□□□□ -1.54
CAPN3-202ENST00000337571 FAM236DA0A1B0GTK5 79 aa5.44□□□□□ -1.54
CAPN3-202ENST00000337571 A0A1W2PNM2 257 aa5.44□□□□□ -1.54
CAPN3-202ENST00000337571 FAM236CP0DP71 79 aa5.44□□□□□ -1.54
CAPN3-202ENST00000337571 ORMDL1Q9P0S3 153 aa5.44□□□□□ -1.54
CAPN3-202ENST00000337571 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
CAPN3-202ENST00000337571 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
CAPN3-202ENST00000337571 A0A1B0GV72 72 aa5.42□□□□□ -1.54
CAPN3-202ENST00000337571 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
CAPN3-202ENST00000337571 CCKP06307 115 aa5.4□□□□□ -1.54
CAPN3-202ENST00000337571 DEFB116Q30KQ4 102 aa5.4□□□□□ -1.54
CAPN3-202ENST00000337571 IGHV6-1A0A0B4J1U7 121 aa5.39□□□□□ -1.55
CAPN3-202ENST00000337571 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
CAPN3-202ENST00000337571 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
CAPN3-202ENST00000337571 VPS25Q9BRG1 176 aa5.37□□□□□ -1.55
CAPN3-202ENST00000337571 LINC00472Q9H8W2 130 aa5.37□□□□□ -1.55
CAPN3-202ENST00000337571 NOTCH2NLQ7Z3S9 236 aa5.35□□□□□ -1.55
CAPN3-202ENST00000337571 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
CAPN3-202ENST00000337571 C14orf132Q9NPU4 83 aa5.35□□□□□ -1.55
CAPN3-202ENST00000337571 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
CAPN3-202ENST00000337571 RBM3P98179 157 aaKnown RBP5.34□□□□□ -1.55
CAPN3-202ENST00000337571 K7ERU9 68 aa5.33□□□□□ -1.56
CAPN3-202ENST00000337571 Q6ZQT0 140 aa5.33□□□□□ -1.56
CAPN3-202ENST00000337571 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
CAPN3-202ENST00000337571 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
CAPN3-202ENST00000337571 JMJD7-PLA2G4BH0Y9G9 81 aa5.32□□□□□ -1.56
CAPN3-202ENST00000337571 J3KT08 172 aa5.31□□□□□ -1.56
CAPN3-202ENST00000337571 HRES1P13985 223 aa5.31□□□□□ -1.56
CAPN3-202ENST00000337571 NDUFB1O75438 58 aa5.3□□□□□ -1.56
CAPN3-202ENST00000337571 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
CAPN3-202ENST00000337571 MT2AP02795 61 aa5.29□□□□□ -1.56
CAPN3-202ENST00000337571 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
CAPN3-202ENST00000337571 FAM240AA0A1B0GVK7 77 aa5.28□□□□□ -1.56
CAPN3-202ENST00000337571 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
CAPN3-202ENST00000337571 USH2AO75445 5202 aa5.28□□□□□ -1.56
CAPN3-202ENST00000337571 J3QR89 54 aa5.27□□□□□ -1.57
CAPN3-202ENST00000337571 SPINK7P58062 85 aa5.27□□□□□ -1.57
CAPN3-202ENST00000337571 LINC00846Q9NV44 126 aa5.27□□□□□ -1.57
CAPN3-202ENST00000337571 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
CAPN3-202ENST00000337571 MT1FP04733 61 aa5.24□□□□□ -1.57
CAPN3-202ENST00000337571 ACYP1P07311 99 aa5.24□□□□□ -1.57
CAPN3-202ENST00000337571 PDE6GP18545 87 aa5.24□□□□□ -1.57
CAPN3-202ENST00000337571 MT-ATP8P03928 68 aa5.23□□□□□ -1.57
CAPN3-202ENST00000337571 A0A1B0GW54 56 aa5.22□□□□□ -1.57
CAPN3-202ENST00000337571 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
CAPN3-202ENST00000337571 Q8N9P0 234 aaPredicted RBP5.22□□□□□ -1.57
CAPN3-202ENST00000337571 A8MWP4 228 aa5.21□□□□□ -1.58
CAPN3-202ENST00000337571 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
CAPN3-202ENST00000337571 Q6ZVQ6 151 aa5.19□□□□□ -1.58
CAPN3-202ENST00000337571 WFDC13Q8IUB5 93 aa5.19□□□□□ -1.58
CAPN3-202ENST00000337571 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
CAPN3-202ENST00000337571 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-202ENST00000337571 NREPQ16612 68 aa5.17□□□□□ -1.58
CAPN3-202ENST00000337571 IGKV3D-7A0A0C4DH55 119 aa5.16□□□□□ -1.58
CAPN3-202ENST00000337571 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
CAPN3-202ENST00000337571 NDUFS5O43920 106 aa5.12□□□□□ -1.59
CAPN3-202ENST00000337571 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
CAPN3-202ENST00000337571 UBL5Q9BZL1 73 aa5.12□□□□□ -1.59
CAPN3-202ENST00000337571 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
CAPN3-202ENST00000337571 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
CAPN3-202ENST00000337571 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
CAPN3-202ENST00000337571 CXCL6P80162 114 aa5.09□□□□□ -1.59
CAPN3-202ENST00000337571 A0A087WVE0 104 aa5.08□□□□□ -1.6
CAPN3-202ENST00000337571 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
CAPN3-202ENST00000337571 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
CAPN3-202ENST00000337571 Q8N9L7 120 aa5.08□□□□□ -1.6
CAPN3-202ENST00000337571 IMUPQ9GZP8 106 aa5.08□□□□□ -1.6
CAPN3-202ENST00000337571 BPY2O14599 106 aa5.07□□□□□ -1.6
CAPN3-202ENST00000337571 HIST1H4AP62805 103 aaKnown RBP5.06□□□□□ -1.6
CAPN3-202ENST00000337571 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms