RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 LCA10Q71F78 164 aa6.24□□□□□ -1.41
HIF1A-202ENST00000337138 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
HIF1A-202ENST00000337138 SPINK1P00995 79 aa6.23□□□□□ -1.41
HIF1A-202ENST00000337138 CNBPP62633 177 aaKnown RBP6.23□□□□□ -1.41
HIF1A-202ENST00000337138 A0A1B0GU69 56 aa6.22□□□□□ -1.41
HIF1A-202ENST00000337138 SPINK7P58062 85 aa6.22□□□□□ -1.41
HIF1A-202ENST00000337138 MOBPQ13875 183 aa6.21□□□□□ -1.42
HIF1A-202ENST00000337138 Q75L30 129 aa6.21□□□□□ -1.42
HIF1A-202ENST00000337138 C14orf177Q52M58 125 aa6.2□□□□□ -1.42
HIF1A-202ENST00000337138 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
HIF1A-202ENST00000337138 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
HIF1A-202ENST00000337138 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
HIF1A-202ENST00000337138 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
HIF1A-202ENST00000337138 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
HIF1A-202ENST00000337138 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
HIF1A-202ENST00000337138 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
HIF1A-202ENST00000337138 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 DNHD1Q96M86 4753 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 IGLV7-46A0A075B6I9 117 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 J3QL48 77 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 C9orf163Q8N9P6 203 aa6.17□□□□□ -1.42
HIF1A-202ENST00000337138 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
HIF1A-202ENST00000337138 LINC00472Q9H8W2 130 aa6.16□□□□□ -1.42
HIF1A-202ENST00000337138 ACYP2P14621 99 aa6.16□□□□□ -1.42
HIF1A-202ENST00000337138 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
HIF1A-202ENST00000337138 NBDYA0A0U1RRE5 68 aa6.15□□□□□ -1.43
HIF1A-202ENST00000337138 LINC00313P59037 77 aa6.15□□□□□ -1.43
HIF1A-202ENST00000337138 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
HIF1A-202ENST00000337138 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
HIF1A-202ENST00000337138 ASB16-AS1Q495Z4 193 aa6.15□□□□□ -1.43
HIF1A-202ENST00000337138 MRPL34Q9BQ48 92 aaKnown RBP6.15□□□□□ -1.43
HIF1A-202ENST00000337138 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
HIF1A-202ENST00000337138 SPRR1BP22528 89 aa6.14□□□□□ -1.43
HIF1A-202ENST00000337138 MMP24-AS1A0A0U1RRL7 71 aa6.14□□□□□ -1.43
HIF1A-202ENST00000337138 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
HIF1A-202ENST00000337138 HRES1P13985 223 aa6.13□□□□□ -1.43
HIF1A-202ENST00000337138 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
HIF1A-202ENST00000337138 A0A087X002 238 aa6.11□□□□□ -1.43
HIF1A-202ENST00000337138 H3BS24 57 aa6.11□□□□□ -1.43
HIF1A-202ENST00000337138 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
HIF1A-202ENST00000337138 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
HIF1A-202ENST00000337138 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
HIF1A-202ENST00000337138 PKHD1P08F94 4074 aa6.1□□□□□ -1.43
HIF1A-202ENST00000337138 A0A1B0GVX0 72 aa6.1□□□□□ -1.43
HIF1A-202ENST00000337138 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
HIF1A-202ENST00000337138 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
HIF1A-202ENST00000337138 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
HIF1A-202ENST00000337138 Q96NJ1 140 aa6.09□□□□□ -1.43
HIF1A-202ENST00000337138 A6NN06 94 aa6.09□□□□□ -1.43
HIF1A-202ENST00000337138 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.43
HIF1A-202ENST00000337138 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
HIF1A-202ENST00000337138 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
HIF1A-202ENST00000337138 RTL8CO15255 209 aa6.07□□□□□ -1.44
HIF1A-202ENST00000337138 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
HIF1A-202ENST00000337138 UQCR11O14957 56 aa6.06□□□□□ -1.44
HIF1A-202ENST00000337138 A0A087WTM6 91 aa6.05□□□□□ -1.44
HIF1A-202ENST00000337138 SPACA4Q8TDM5 124 aa6.03□□□□□ -1.44
HIF1A-202ENST00000337138 ZNF861PO60384 105 aa6□□□□□ -1.45
HIF1A-202ENST00000337138 CSAG1Q6PB30 78 aa6□□□□□ -1.45
HIF1A-202ENST00000337138 LINC00483Q53H64 154 aa6□□□□□ -1.45
HIF1A-202ENST00000337138 Q5W150 140 aa5.99□□□□□ -1.45
HIF1A-202ENST00000337138 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
HIF1A-202ENST00000337138 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
HIF1A-202ENST00000337138 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
HIF1A-202ENST00000337138 K7ERS5 55 aa5.96□□□□□ -1.46
HIF1A-202ENST00000337138 PLAC8Q9NZF1 115 aa5.94□□□□□ -1.46
HIF1A-202ENST00000337138 Q8N1X5 172 aa5.93□□□□□ -1.46
HIF1A-202ENST00000337138 IGLV7-43P04211 117 aa5.93□□□□□ -1.46
HIF1A-202ENST00000337138 Q6ZR54 194 aa5.92□□□□□ -1.46
HIF1A-202ENST00000337138 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
HIF1A-202ENST00000337138 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
HIF1A-202ENST00000337138 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
HIF1A-202ENST00000337138 TNXBP22105 4242 aa5.87□□□□□ -1.47
HIF1A-202ENST00000337138 KRTAP10-2P60368 255 aa5.87□□□□□ -1.47
HIF1A-202ENST00000337138 HSPG2P98160 4391 aa5.85□□□□□ -1.47
HIF1A-202ENST00000337138 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
HIF1A-202ENST00000337138 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
HIF1A-202ENST00000337138 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
HIF1A-202ENST00000337138 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
HIF1A-202ENST00000337138 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
HIF1A-202ENST00000337138 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
HIF1A-202ENST00000337138 KRTAP10-1P60331 282 aa5.76□□□□□ -1.49
HIF1A-202ENST00000337138 C9orf92A6NGG3 77 aa5.76□□□□□ -1.49
HIF1A-202ENST00000337138 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
HIF1A-202ENST00000337138 A0A0D9SG42 100 aa5.73□□□□□ -1.49
HIF1A-202ENST00000337138 A0A1B0GU33 70 aa5.72□□□□□ -1.49
HIF1A-202ENST00000337138 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
HIF1A-202ENST00000337138 Q6ZSA8 131 aa5.7□□□□□ -1.5
HIF1A-202ENST00000337138 RYR2Q92736 4967 aa5.69□□□□□ -1.5
HIF1A-202ENST00000337138 Q5VSD8 79 aa5.69□□□□□ -1.5
HIF1A-202ENST00000337138 FAT1Q14517 4588 aa5.69□□□□□ -1.5
HIF1A-202ENST00000337138 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
HIF1A-202ENST00000337138 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
HIF1A-202ENST00000337138 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
HIF1A-202ENST00000337138 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
HIF1A-202ENST00000337138 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
HIF1A-202ENST00000337138 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
HIF1A-202ENST00000337138 ROMO1P60602 79 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms