RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 IGLV7-43P04211 117 aa3.99□□□□□ -1.77
HMG20A-201ENST00000336216 PKD1P98161 4303 aa3.99□□□□□ -1.77
HMG20A-201ENST00000336216 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
HMG20A-201ENST00000336216 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
HMG20A-201ENST00000336216 PRR26Q8N8Z3 221 aa3.98□□□□□ -1.77
HMG20A-201ENST00000336216 ZCCHC13Q8WW36 166 aaKnown RBP3.98□□□□□ -1.77
HMG20A-201ENST00000336216 SPRR1AP35321 89 aa3.98□□□□□ -1.77
HMG20A-201ENST00000336216 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
HMG20A-201ENST00000336216 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
HMG20A-201ENST00000336216 KRTAP7-1Q8IUC3 87 aa3.97□□□□□ -1.77
HMG20A-201ENST00000336216 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
HMG20A-201ENST00000336216 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
HMG20A-201ENST00000336216 H3BPC8 53 aa3.97□□□□□ -1.77
HMG20A-201ENST00000336216 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
HMG20A-201ENST00000336216 FAT2Q9NYQ8 4349 aa3.96□□□□□ -1.77
HMG20A-201ENST00000336216 KRTAP11-1Q8IUC1 163 aa3.96□□□□□ -1.78
HMG20A-201ENST00000336216 FBN3Q75N90 2809 aa3.96□□□□□ -1.78
HMG20A-201ENST00000336216 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.78
HMG20A-201ENST00000336216 H3BS24 57 aa3.96□□□□□ -1.78
HMG20A-201ENST00000336216 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
HMG20A-201ENST00000336216 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
HMG20A-201ENST00000336216 A0A1B0GVX0 72 aa3.95□□□□□ -1.78
HMG20A-201ENST00000336216 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
HMG20A-201ENST00000336216 TP53AIP1Q9HCN2 124 aa3.95□□□□□ -1.78
HMG20A-201ENST00000336216 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
HMG20A-201ENST00000336216 FAM229AH3BQW9 127 aa3.94□□□□□ -1.78
HMG20A-201ENST00000336216 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
HMG20A-201ENST00000336216 LCA10Q71F78 164 aa3.94□□□□□ -1.78
HMG20A-201ENST00000336216 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
HMG20A-201ENST00000336216 SPINK7P58062 85 aa3.93□□□□□ -1.78
HMG20A-201ENST00000336216 MMP24-AS1A0A0U1RRL7 71 aa3.93□□□□□ -1.78
HMG20A-201ENST00000336216 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
HMG20A-201ENST00000336216 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 LINC00472Q9H8W2 130 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 LCE6AA0A183 80 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 A0A1B0GU69 56 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 KRTAP29-1A8MX34 341 aaPredicted RBP3.92□□□□□ -1.78
HMG20A-201ENST00000336216 C8orf87E5RJ46 101 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
HMG20A-201ENST00000336216 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
HMG20A-201ENST00000336216 Q75L30 129 aa3.9□□□□□ -1.78
HMG20A-201ENST00000336216 HRES1P13985 223 aa3.9□□□□□ -1.79
HMG20A-201ENST00000336216 ACYP2P14621 99 aa3.9□□□□□ -1.79
HMG20A-201ENST00000336216 KRTAP10-1P60331 282 aa3.9□□□□□ -1.79
HMG20A-201ENST00000336216 KRTAP21-3Q3LHN1 58 aa3.9□□□□□ -1.79
HMG20A-201ENST00000336216 Q8N1X5 172 aa3.89□□□□□ -1.79
HMG20A-201ENST00000336216 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
HMG20A-201ENST00000336216 PLAC8Q9NZF1 115 aa3.88□□□□□ -1.79
HMG20A-201ENST00000336216 A0A087X002 238 aa3.87□□□□□ -1.79
HMG20A-201ENST00000336216 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
HMG20A-201ENST00000336216 DNAH2Q9P225 4427 aa3.87□□□□□ -1.79
HMG20A-201ENST00000336216 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
HMG20A-201ENST00000336216 LINC01558Q9Y6Z2 57 aa3.86□□□□□ -1.79
HMG20A-201ENST00000336216 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
HMG20A-201ENST00000336216 HSPG2P98160 4391 aa3.84□□□□□ -1.79
HMG20A-201ENST00000336216 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.79
HMG20A-201ENST00000336216 Q6ZR54 194 aa3.84□□□□□ -1.8
HMG20A-201ENST00000336216 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
HMG20A-201ENST00000336216 MEGF8Q7Z7M0 2845 aa3.83□□□□□ -1.8
HMG20A-201ENST00000336216 DNHD1Q96M86 4753 aa3.83□□□□□ -1.8
HMG20A-201ENST00000336216 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
HMG20A-201ENST00000336216 SPRR1BP22528 89 aa3.82□□□□□ -1.8
HMG20A-201ENST00000336216 Q5W150 140 aa3.82□□□□□ -1.8
HMG20A-201ENST00000336216 A6NN06 94 aa3.82□□□□□ -1.8
HMG20A-201ENST00000336216 UQCR11O14957 56 aa3.81□□□□□ -1.8
HMG20A-201ENST00000336216 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
HMG20A-201ENST00000336216 J3QL48 77 aa3.79□□□□□ -1.8
HMG20A-201ENST00000336216 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
HMG20A-201ENST00000336216 TNXBP22105 4242 aa3.77□□□□□ -1.81
HMG20A-201ENST00000336216 STARD9Q9P2P6 4700 aa3.77□□□□□ -1.81
HMG20A-201ENST00000336216 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
HMG20A-201ENST00000336216 CSAG1Q6PB30 78 aa3.76□□□□□ -1.81
HMG20A-201ENST00000336216 A0A0D9SG42 100 aa3.74□□□□□ -1.81
HMG20A-201ENST00000336216 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
HMG20A-201ENST00000336216 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
HMG20A-201ENST00000336216 SACSQ9NZJ4 4579 aa3.72□□□□□ -1.81
HMG20A-201ENST00000336216 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
HMG20A-201ENST00000336216 Q5VSD8 79 aa3.72□□□□□ -1.81
HMG20A-201ENST00000336216 KRTAP13-1Q8IUC0 172 aa3.72□□□□□ -1.81
HMG20A-201ENST00000336216 COX6B2Q6YFQ2 88 aa3.71□□□□□ -1.82
HMG20A-201ENST00000336216 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
HMG20A-201ENST00000336216 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
HMG20A-201ENST00000336216 Q6ZSA8 131 aa3.66□□□□□ -1.82
HMG20A-201ENST00000336216 ASB16-AS1Q495Z4 193 aa3.66□□□□□ -1.82
HMG20A-201ENST00000336216 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
HMG20A-201ENST00000336216 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
HMG20A-201ENST00000336216 A0A1B0GU33 70 aa3.62□□□□□ -1.83
HMG20A-201ENST00000336216 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
HMG20A-201ENST00000336216 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
HMG20A-201ENST00000336216 KRTAP16-1A8MUX0 517 aa3.59□□□□□ -1.84
HMG20A-201ENST00000336216 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.84
HMG20A-201ENST00000336216 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
HMG20A-201ENST00000336216 S4R3F8 94 aa3.54□□□□□ -1.84
HMG20A-201ENST00000336216 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
HMG20A-201ENST00000336216 M0R2T5 61 aa3.53□□□□□ -1.84
HMG20A-201ENST00000336216 H1FX-AS1Q4G0G2 97 aa3.52□□□□□ -1.85
HMG20A-201ENST00000336216 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
HMG20A-201ENST00000336216 H0YAA0 97 aa3.51□□□□□ -1.85
HMG20A-201ENST00000336216 LRP1BQ9NZR2 4599 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms