RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 DNAH2Q9P225 4427 aa8.44□□□□□ -1.06
SF1-202ENST00000334944 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
SF1-202ENST00000334944 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
SF1-202ENST00000334944 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
SF1-202ENST00000334944 RTL8CO15255 209 aa8.41□□□□□ -1.06
SF1-202ENST00000334944 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
SF1-202ENST00000334944 H3BPC8 53 aa8.4□□□□□ -1.06
SF1-202ENST00000334944 IGLV8-61A0A075B6I0 122 aa8.4□□□□□ -1.07
SF1-202ENST00000334944 HRES1P13985 223 aa8.4□□□□□ -1.07
SF1-202ENST00000334944 A8MWP4 228 aa8.39□□□□□ -1.07
SF1-202ENST00000334944 LY6G6CO95867 125 aa8.38□□□□□ -1.07
SF1-202ENST00000334944 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
SF1-202ENST00000334944 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
SF1-202ENST00000334944 PLAC8Q9NZF1 115 aa8.37□□□□□ -1.07
SF1-202ENST00000334944 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
SF1-202ENST00000334944 SPRR1BP22528 89 aa8.35□□□□□ -1.07
SF1-202ENST00000334944 LINC00472Q9H8W2 130 aa8.35□□□□□ -1.07
SF1-202ENST00000334944 DNAH6Q9C0G6 4158 aa8.34□□□□□ -1.07
SF1-202ENST00000334944 Q6ZR54 194 aa8.34□□□□□ -1.07
SF1-202ENST00000334944 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
SF1-202ENST00000334944 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
SF1-202ENST00000334944 DNAH17Q9UFH2 4485 aa8.32□□□□□ -1.08
SF1-202ENST00000334944 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
SF1-202ENST00000334944 LINC01554Q52M75 96 aa8.31□□□□□ -1.08
SF1-202ENST00000334944 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.09
SF1-202ENST00000334944 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
SF1-202ENST00000334944 WWC2-AS2Q96NR7 200 aa8.25□□□□□ -1.09
SF1-202ENST00000334944 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
SF1-202ENST00000334944 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
SF1-202ENST00000334944 ZNF861PO60384 105 aa8.23□□□□□ -1.09
SF1-202ENST00000334944 A0A087X002 238 aa8.23□□□□□ -1.09
SF1-202ENST00000334944 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
SF1-202ENST00000334944 Q96NJ1 140 aa8.22□□□□□ -1.09
SF1-202ENST00000334944 SPINK6Q6UWN8 80 aa8.21□□□□□ -1.1
SF1-202ENST00000334944 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
SF1-202ENST00000334944 C8orf17Q9NRJ1 99 aa8.2□□□□□ -1.1
SF1-202ENST00000334944 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
SF1-202ENST00000334944 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
SF1-202ENST00000334944 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
SF1-202ENST00000334944 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
SF1-202ENST00000334944 ZNF706Q9Y5V0 76 aaPredicted RBP8.17□□□□□ -1.1
SF1-202ENST00000334944 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
SF1-202ENST00000334944 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
SF1-202ENST00000334944 Q5W150 140 aa8.15□□□□□ -1.11
SF1-202ENST00000334944 ALMS1Q8TCU4 4167 aa8.14□□□□□ -1.11
SF1-202ENST00000334944 LRP1BQ9NZR2 4599 aa8.14□□□□□ -1.11
SF1-202ENST00000334944 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
SF1-202ENST00000334944 A0A1B0GU69 56 aa8.12□□□□□ -1.11
SF1-202ENST00000334944 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
SF1-202ENST00000334944 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
SF1-202ENST00000334944 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
SF1-202ENST00000334944 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
SF1-202ENST00000334944 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
SF1-202ENST00000334944 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
SF1-202ENST00000334944 ACYP2P14621 99 aa8.06□□□□□ -1.12
SF1-202ENST00000334944 PKD1P98161 4303 aa8.05□□□□□ -1.12
SF1-202ENST00000334944 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
SF1-202ENST00000334944 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
SF1-202ENST00000334944 FLG2Q5D862 2391 aaPredicted RBP8.04□□□□□ -1.12
SF1-202ENST00000334944 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
SF1-202ENST00000334944 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
SF1-202ENST00000334944 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
SF1-202ENST00000334944 UQCR11O14957 56 aa7.99□□□□□ -1.13
SF1-202ENST00000334944 Q6ZSA8 131 aa7.97□□□□□ -1.13
SF1-202ENST00000334944 SSBP3-AS1Q7Z2R9 100 aa7.94□□□□□ -1.14
SF1-202ENST00000334944 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
SF1-202ENST00000334944 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
SF1-202ENST00000334944 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
SF1-202ENST00000334944 SPINK1P00995 79 aa7.91□□□□□ -1.14
SF1-202ENST00000334944 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
SF1-202ENST00000334944 SACSQ9NZJ4 4579 aa7.89□□□□□ -1.15
SF1-202ENST00000334944 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
SF1-202ENST00000334944 FAT1Q14517 4588 aa7.84□□□□□ -1.15
SF1-202ENST00000334944 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.15
SF1-202ENST00000334944 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
SF1-202ENST00000334944 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
SF1-202ENST00000334944 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
SF1-202ENST00000334944 ROMO1P60602 79 aa7.78□□□□□ -1.16
SF1-202ENST00000334944 KMT2CQ8NEZ4 4911 aaKnown RBP7.76□□□□□ -1.17
SF1-202ENST00000334944 KRTAP16-1A8MUX0 517 aa7.74□□□□□ -1.17
SF1-202ENST00000334944 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
SF1-202ENST00000334944 Q8N1X5 172 aa7.73□□□□□ -1.17
SF1-202ENST00000334944 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
SF1-202ENST00000334944 LINC00304Q8N9R0 145 aa7.7□□□□□ -1.18
SF1-202ENST00000334944 H0YAA0 97 aa7.69□□□□□ -1.18
SF1-202ENST00000334944 A8MUU9 505 aa7.67□□□□□ -1.18
SF1-202ENST00000334944 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
SF1-202ENST00000334944 P0C880 135 aa7.67□□□□□ -1.18
SF1-202ENST00000334944 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
SF1-202ENST00000334944 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
SF1-202ENST00000334944 RYR2Q92736 4967 aa7.65□□□□□ -1.18
SF1-202ENST00000334944 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
SF1-202ENST00000334944 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
SF1-202ENST00000334944 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
SF1-202ENST00000334944 A0A1B0GU33 70 aa7.52□□□□□ -1.21
SF1-202ENST00000334944 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
SF1-202ENST00000334944 RYR3Q15413 4870 aa7.48□□□□□ -1.21
SF1-202ENST00000334944 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
SF1-202ENST00000334944 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
SF1-202ENST00000334944 MYCBP2O75592 4640 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms