RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 IGLV7-46A0A075B6I9 117 aa13.79□□□□□ -0.2
NDEL1-201ENST00000334527 SPINK6Q6UWN8 80 aa13.79□□□□□ -0.2
NDEL1-201ENST00000334527 DNHD1Q96M86 4753 aa13.76□□□□□ -0.21
NDEL1-201ENST00000334527 CD164Q04900 197 aa13.76□□□□□ -0.21
NDEL1-201ENST00000334527 KRTAP10-2P60368 255 aa13.74□□□□□ -0.21
NDEL1-201ENST00000334527 V9GYY9 64 aa13.74□□□□□ -0.21
NDEL1-201ENST00000334527 DNAH6Q9C0G6 4158 aa13.73□□□□□ -0.21
NDEL1-201ENST00000334527 ALMS1Q8TCU4 4167 aa13.72□□□□□ -0.21
NDEL1-201ENST00000334527 COA5Q86WW8 74 aa13.71□□□□□ -0.22
NDEL1-201ENST00000334527 A8MUN3 132 aa13.69□□□□□ -0.22
NDEL1-201ENST00000334527 SSBP3-AS1Q7Z2R9 100 aa13.69□□□□□ -0.22
NDEL1-201ENST00000334527 DNAH5Q8TE73 4624 aa13.68□□□□□ -0.22
NDEL1-201ENST00000334527 DNAH11Q96DT5 4516 aa13.68□□□□□ -0.22
NDEL1-201ENST00000334527 Q8N9P0 234 aaPredicted RBP13.67□□□□□ -0.22
NDEL1-201ENST00000334527 C1orf195Q5TG92 126 aa13.63□□□□□ -0.23
NDEL1-201ENST00000334527 LIMD2Q9BT23 127 aa13.61□□□□□ -0.23
NDEL1-201ENST00000334527 Q5W150 140 aa13.6□□□□□ -0.23
NDEL1-201ENST00000334527 Q5VV11 94 aa13.59□□□□□ -0.23
NDEL1-201ENST00000334527 LOC101927531A0A1B0GV80 90 aa13.57□□□□□ -0.24
NDEL1-201ENST00000334527 KRTAP10-1P60331 282 aa13.57□□□□□ -0.24
NDEL1-201ENST00000334527 C8orf87E5RJ46 101 aa13.56□□□□□ -0.24
NDEL1-201ENST00000334527 Q6ZSA8 131 aa13.56□□□□□ -0.24
NDEL1-201ENST00000334527 KRTAP13-2Q52LG2 175 aa13.56□□□□□ -0.24
NDEL1-201ENST00000334527 KRTAP13-3Q3SY46 172 aa13.55□□□□□ -0.24
NDEL1-201ENST00000334527 PRR15LQ9BU68 103 aa13.55□□□□□ -0.24
NDEL1-201ENST00000334527 PKD1P98161 4303 aa13.52□□□□□ -0.25
NDEL1-201ENST00000334527 HRES1P13985 223 aa13.5□□□□□ -0.25
NDEL1-201ENST00000334527 HYDINQ4G0P3 5121 aa13.49□□□□□ -0.25
NDEL1-201ENST00000334527 LINC00313P59037 77 aa13.49□□□□□ -0.25
NDEL1-201ENST00000334527 LRP1BQ9NZR2 4599 aa13.48□□□□□ -0.25
NDEL1-201ENST00000334527 CHKB-CPT1BH3BT56 60 aa13.48□□□□□ -0.25
NDEL1-201ENST00000334527 SPAG11AQ6PDA7 123 aa13.43□□□□□ -0.26
NDEL1-201ENST00000334527 FAT2Q9NYQ8 4349 aa13.43□□□□□ -0.26
NDEL1-201ENST00000334527 KRTAP1-4P0C5Y4 121 aa13.4□□□□□ -0.26
NDEL1-201ENST00000334527 Q75L30 129 aa13.4□□□□□ -0.26
NDEL1-201ENST00000334527 A8MU10 97 aa13.38□□□□□ -0.27
NDEL1-201ENST00000334527 FAM229AH3BQW9 127 aa13.37□□□□□ -0.27
NDEL1-201ENST00000334527 LINC01558Q9Y6Z2 57 aa13.37□□□□□ -0.27
NDEL1-201ENST00000334527 RETNLBQ9BQ08 111 aa13.37□□□□□ -0.27
NDEL1-201ENST00000334527 VPS13BQ7Z7G8 4022 aa13.31□□□□□ -0.28
NDEL1-201ENST00000334527 KRTAP16-1A8MUX0 517 aa13.31□□□□□ -0.28
NDEL1-201ENST00000334527 A6NED7 52 aa13.3□□□□□ -0.28
NDEL1-201ENST00000334527 PLA2G1BP04054 148 aaKnown RBP13.29□□□□□ -0.28
NDEL1-201ENST00000334527 ACYP2P14621 99 aa13.29□□□□□ -0.28
NDEL1-201ENST00000334527 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
NDEL1-201ENST00000334527 IGKV2-30P06310 120 aa13.26□□□□□ -0.29
NDEL1-201ENST00000334527 C4orf48Q5BLP8 95 aa13.25□□□□□ -0.29
NDEL1-201ENST00000334527 TYMSOSQ8TAI1 123 aa13.25□□□□□ -0.29
NDEL1-201ENST00000334527 DMAC1Q96GE9 116 aa13.24□□□□□ -0.29
NDEL1-201ENST00000334527 LCA10Q71F78 164 aa13.23□□□□□ -0.29
NDEL1-201ENST00000334527 SPINK1P00995 79 aa13.17□□□□□ -0.3
NDEL1-201ENST00000334527 PMAIP1Q13794 54 aa13.15□□□□□ -0.3
NDEL1-201ENST00000334527 CDC42SE1Q9NRR8 79 aa13.14□□□□□ -0.31
NDEL1-201ENST00000334527 SPTSSBQ8NFR3 76 aa13.14□□□□□ -0.31
NDEL1-201ENST00000334527 IGKV2D-30A0A075B6S6 120 aa13.12□□□□□ -0.31
NDEL1-201ENST00000334527 SPINK7P58062 85 aa13.12□□□□□ -0.31
NDEL1-201ENST00000334527 PKHD1P08F94 4074 aa13.1□□□□□ -0.31
NDEL1-201ENST00000334527 ATP11AUNQ6ZP68 121 aa13.09□□□□□ -0.31
NDEL1-201ENST00000334527 LINC00304Q8N9R0 145 aa13.06□□□□□ -0.32
NDEL1-201ENST00000334527 SACSQ9NZJ4 4579 aa13□□□□□ -0.33
NDEL1-201ENST00000334527 SMR3BP02814 79 aaPredicted RBP13□□□□□ -0.33
NDEL1-201ENST00000334527 RPS29P62273 56 aaKnown RBP12.99□□□□□ -0.33
NDEL1-201ENST00000334527 KRTAP21-3Q3LHN1 58 aa12.97□□□□□ -0.33
NDEL1-201ENST00000334527 C7orf65Q6ZTY9 151 aa12.97□□□□□ -0.33
NDEL1-201ENST00000334527 DYNC1H1Q14204 4646 aaKnown RBP12.93□□□□□ -0.34
NDEL1-201ENST00000334527 A0A1B0GU69 56 aa12.92□□□□□ -0.34
NDEL1-201ENST00000334527 A6NN06 94 aa12.9□□□□□ -0.34
NDEL1-201ENST00000334527 KTN1-AS1Q86SY8 53 aa12.84□□□□□ -0.35
NDEL1-201ENST00000334527 A0A1B0GVY2 172 aa12.83□□□□□ -0.36
NDEL1-201ENST00000334527 C9orf92A6NGG3 77 aa12.8□□□□□ -0.36
NDEL1-201ENST00000334527 KRTAP10-4P60372 401 aaPredicted RBP12.8□□□□□ -0.36
NDEL1-201ENST00000334527 Q8N1X5 172 aa12.8□□□□□ -0.36
NDEL1-201ENST00000334527 FAT1Q14517 4588 aa12.78□□□□□ -0.36
NDEL1-201ENST00000334527 APOBP04114 4563 aaKnown RBP12.76□□□□□ -0.37
NDEL1-201ENST00000334527 PKHD1L1Q86WI1 4243 aa12.74□□□□□ -0.37
NDEL1-201ENST00000334527 C20orf166-AS1Q96NR2 134 aa12.73□□□□□ -0.37
NDEL1-201ENST00000334527 A8MUU9 505 aa12.72□□□□□ -0.37
NDEL1-201ENST00000334527 SEC61GP60059 68 aa12.69□□□□□ -0.38
NDEL1-201ENST00000334527 SPATA8Q6RVD6 105 aa12.68□□□□□ -0.38
NDEL1-201ENST00000334527 UQCR11O14957 56 aa12.67□□□□□ -0.38
NDEL1-201ENST00000334527 MIR22HGQ0VDD5 57 aa12.64□□□□□ -0.39
NDEL1-201ENST00000334527 RYR2Q92736 4967 aa12.62□□□□□ -0.39
NDEL1-201ENST00000334527 KRTAP3-1Q9BYR8 98 aa12.51□□□□□ -0.41
NDEL1-201ENST00000334527 RBM12B-AS1Q9P1G2 102 aa12.49□□□□□ -0.41
NDEL1-201ENST00000334527 FLG2Q5D862 2391 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-201ENST00000334527 KMT2CQ8NEZ4 4911 aaKnown RBP12.45□□□□□ -0.42
NDEL1-201ENST00000334527 FAT3Q8TDW7 4589 aa12.34□□□□□ -0.43
NDEL1-201ENST00000334527 COX6B2Q6YFQ2 88 aa12.32□□□□□ -0.44
NDEL1-201ENST00000334527 LRP1Q07954 4544 aaKnown RBP12.32□□□□□ -0.44
NDEL1-201ENST00000334527 PRAC1Q96KF2 57 aa12.32□□□□□ -0.44
NDEL1-201ENST00000334527 KRTAP10-8P60410 259 aa12.31□□□□□ -0.44
NDEL1-201ENST00000334527 TNXBP22105 4242 aa12.31□□□□□ -0.44
NDEL1-201ENST00000334527 ADM2Q7Z4H4 148 aa12.3□□□□□ -0.44
NDEL1-201ENST00000334527 Q5VSD8 79 aa12.28□□□□□ -0.44
NDEL1-201ENST00000334527 H0YAA0 97 aa12.26□□□□□ -0.45
NDEL1-201ENST00000334527 A0A1B0GU33 70 aa12.23□□□□□ -0.45
NDEL1-201ENST00000334527 HSPG2P98160 4391 aa12.21□□□□□ -0.46
NDEL1-201ENST00000334527 H1FX-AS1Q4G0G2 97 aa12.19□□□□□ -0.46
NDEL1-201ENST00000334527 RPL37P61927 97 aaKnown RBP12.16□□□□□ -0.46
NDEL1-201ENST00000334527 XP32Q5T750 250 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms