RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
CSGALNACT1-201ENST00000332246 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
CSGALNACT1-201ENST00000332246 SPINK7P58062 85 aa5.91□□□□□ -1.46
CSGALNACT1-201ENST00000332246 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
CSGALNACT1-201ENST00000332246 HRES1P13985 223 aa5.9□□□□□ -1.47
CSGALNACT1-201ENST00000332246 PRAC1Q96KF2 57 aa5.9□□□□□ -1.47
CSGALNACT1-201ENST00000332246 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.47
CSGALNACT1-201ENST00000332246 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
CSGALNACT1-201ENST00000332246 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
CSGALNACT1-201ENST00000332246 K7ERS5 55 aa5.87□□□□□ -1.47
CSGALNACT1-201ENST00000332246 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
CSGALNACT1-201ENST00000332246 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
CSGALNACT1-201ENST00000332246 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
CSGALNACT1-201ENST00000332246 Q5W150 140 aa5.85□□□□□ -1.47
CSGALNACT1-201ENST00000332246 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
CSGALNACT1-201ENST00000332246 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
CSGALNACT1-201ENST00000332246 SPRR1BP22528 89 aa5.84□□□□□ -1.47
CSGALNACT1-201ENST00000332246 UQCR11O14957 56 aa5.84□□□□□ -1.48
CSGALNACT1-201ENST00000332246 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
CSGALNACT1-201ENST00000332246 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
CSGALNACT1-201ENST00000332246 LCA10Q71F78 164 aa5.81□□□□□ -1.48
CSGALNACT1-201ENST00000332246 LINC00304Q8N9R0 145 aa5.81□□□□□ -1.48
CSGALNACT1-201ENST00000332246 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
CSGALNACT1-201ENST00000332246 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
CSGALNACT1-201ENST00000332246 PLAC8Q9NZF1 115 aa5.78□□□□□ -1.48
CSGALNACT1-201ENST00000332246 A0A0D9SG42 100 aa5.77□□□□□ -1.49
CSGALNACT1-201ENST00000332246 Q75L30 129 aa5.77□□□□□ -1.49
CSGALNACT1-201ENST00000332246 KRTAP10-1P60331 282 aa5.77□□□□□ -1.49
CSGALNACT1-201ENST00000332246 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
CSGALNACT1-201ENST00000332246 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
CSGALNACT1-201ENST00000332246 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
CSGALNACT1-201ENST00000332246 LCE6AA0A183 80 aa5.72□□□□□ -1.49
CSGALNACT1-201ENST00000332246 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
CSGALNACT1-201ENST00000332246 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.5
CSGALNACT1-201ENST00000332246 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
CSGALNACT1-201ENST00000332246 Q6ZR54 194 aa5.68□□□□□ -1.5
CSGALNACT1-201ENST00000332246 KRTAP13-1Q8IUC0 172 aa5.67□□□□□ -1.5
CSGALNACT1-201ENST00000332246 LINC00483Q53H64 154 aa5.67□□□□□ -1.5
CSGALNACT1-201ENST00000332246 CSAG1Q6PB30 78 aa5.65□□□□□ -1.51
CSGALNACT1-201ENST00000332246 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
CSGALNACT1-201ENST00000332246 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
CSGALNACT1-201ENST00000332246 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
CSGALNACT1-201ENST00000332246 A0A1B0GU33 70 aa5.61□□□□□ -1.51
CSGALNACT1-201ENST00000332246 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
CSGALNACT1-201ENST00000332246 DMAC1Q96GE9 116 aa5.6□□□□□ -1.51
CSGALNACT1-201ENST00000332246 A6NN06 94 aa5.55□□□□□ -1.52
CSGALNACT1-201ENST00000332246 H3BS24 57 aa5.43□□□□□ -1.54
CSGALNACT1-201ENST00000332246 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
CSGALNACT1-201ENST00000332246 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.55
CSGALNACT1-201ENST00000332246 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
CSGALNACT1-201ENST00000332246 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
CSGALNACT1-201ENST00000332246 Q6ZSA8 131 aa5.38□□□□□ -1.55
CSGALNACT1-201ENST00000332246 J3QL48 77 aa5.37□□□□□ -1.55
CSGALNACT1-201ENST00000332246 Q5VSD8 79 aa5.37□□□□□ -1.55
CSGALNACT1-201ENST00000332246 S4R3F8 94 aa5.35□□□□□ -1.55
CSGALNACT1-201ENST00000332246 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
CSGALNACT1-201ENST00000332246 DNAH10Q8IVF4 4471 aa5.31□□□□□ -1.56
CSGALNACT1-201ENST00000332246 KRTAP16-1A8MUX0 517 aa5.31□□□□□ -1.56
CSGALNACT1-201ENST00000332246 KRTAP13-3Q3SY46 172 aa5.29□□□□□ -1.56
CSGALNACT1-201ENST00000332246 HUWE1Q7Z6Z7 4374 aaKnown RBP5.28□□□□□ -1.56
CSGALNACT1-201ENST00000332246 H0YAA0 97 aa5.27□□□□□ -1.57
CSGALNACT1-201ENST00000332246 ROMO1P60602 79 aa5.25□□□□□ -1.57
CSGALNACT1-201ENST00000332246 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
CSGALNACT1-201ENST00000332246 R4GN34 69 aa5.24□□□□□ -1.57
CSGALNACT1-201ENST00000332246 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
CSGALNACT1-201ENST00000332246 M0QZ58 72 aa5.23□□□□□ -1.57
CSGALNACT1-201ENST00000332246 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
CSGALNACT1-201ENST00000332246 A8MUU9 505 aa5.21□□□□□ -1.58
CSGALNACT1-201ENST00000332246 KRTAP21-3Q3LHN1 58 aa5.2□□□□□ -1.58
CSGALNACT1-201ENST00000332246 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
CSGALNACT1-201ENST00000332246 P0C880 135 aa5.14□□□□□ -1.59
CSGALNACT1-201ENST00000332246 ANK2Q01484 3957 aa5.14□□□□□ -1.59
CSGALNACT1-201ENST00000332246 PLECQ15149 4684 aaKnown RBP5.13□□□□□ -1.59
CSGALNACT1-201ENST00000332246 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
CSGALNACT1-201ENST00000332246 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
CSGALNACT1-201ENST00000332246 RPS29P62273 56 aaKnown RBP5.1□□□□□ -1.59
CSGALNACT1-201ENST00000332246 LYSTQ99698 3801 aa5.1□□□□□ -1.59
CSGALNACT1-201ENST00000332246 DNAH11Q96DT5 4516 aa5.1□□□□□ -1.59
CSGALNACT1-201ENST00000332246 XP32Q5T750 250 aa5.09□□□□□ -1.59
CSGALNACT1-201ENST00000332246 DNHD1Q96M86 4753 aa5.09□□□□□ -1.59
CSGALNACT1-201ENST00000332246 M0R2T5 61 aa5.08□□□□□ -1.6
CSGALNACT1-201ENST00000332246 DNAH9Q9NYC9 4486 aa5.06□□□□□ -1.6
CSGALNACT1-201ENST00000332246 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
CSGALNACT1-201ENST00000332246 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
CSGALNACT1-201ENST00000332246 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
CSGALNACT1-201ENST00000332246 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
CSGALNACT1-201ENST00000332246 DNAH1Q9P2D7 4330 aa5.01□□□□□ -1.61
CSGALNACT1-201ENST00000332246 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
CSGALNACT1-201ENST00000332246 FAT1Q14517 4588 aa4.98□□□□□ -1.61
CSGALNACT1-201ENST00000332246 KMT2AQ03164 3969 aa4.98□□□□□ -1.61
CSGALNACT1-201ENST00000332246 A0A1B0GVY2 172 aa4.97□□□□□ -1.61
CSGALNACT1-201ENST00000332246 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
CSGALNACT1-201ENST00000332246 PRKDCP78527 4128 aaKnown RBP4.95□□□□□ -1.62
CSGALNACT1-201ENST00000332246 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
CSGALNACT1-201ENST00000332246 LRP1BQ9NZR2 4599 aa4.93□□□□□ -1.62
CSGALNACT1-201ENST00000332246 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
CSGALNACT1-201ENST00000332246 FRAS1Q86XX4 4008 aa4.9□□□□□ -1.62
CSGALNACT1-201ENST00000332246 TPRXLQ17RH7 258 aa4.9□□□□□ -1.62
CSGALNACT1-201ENST00000332246 DNAH5Q8TE73 4624 aa4.9□□□□□ -1.63
CSGALNACT1-201ENST00000332246 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms