RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 H3BS24 57 aa5.75□□□□□ -1.49
SS18L1-201ENST00000331758 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
SS18L1-201ENST00000331758 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
SS18L1-201ENST00000331758 LCE6AA0A183 80 aa5.72□□□□□ -1.49
SS18L1-201ENST00000331758 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.5
SS18L1-201ENST00000331758 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
SS18L1-201ENST00000331758 UQCR11O14957 56 aa5.7□□□□□ -1.5
SS18L1-201ENST00000331758 ZCCHC13Q8WW36 166 aaKnown RBP5.69□□□□□ -1.5
SS18L1-201ENST00000331758 J3QL48 77 aa5.69□□□□□ -1.5
SS18L1-201ENST00000331758 IGLV7-46A0A075B6I9 117 aa5.68□□□□□ -1.5
SS18L1-201ENST00000331758 ZNF469Q96JG9 3925 aaPredicted RBP5.68□□□□□ -1.5
SS18L1-201ENST00000331758 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
SS18L1-201ENST00000331758 LINC00483Q53H64 154 aa5.66□□□□□ -1.5
SS18L1-201ENST00000331758 Q75L30 129 aa5.65□□□□□ -1.5
SS18L1-201ENST00000331758 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
SS18L1-201ENST00000331758 A0A087X002 238 aa5.65□□□□□ -1.5
SS18L1-201ENST00000331758 KRTAP21-3Q3LHN1 58 aa5.65□□□□□ -1.5
SS18L1-201ENST00000331758 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
SS18L1-201ENST00000331758 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
SS18L1-201ENST00000331758 KRTAP13-1Q8IUC0 172 aa5.61□□□□□ -1.51
SS18L1-201ENST00000331758 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
SS18L1-201ENST00000331758 KRTAP29-1A8MX34 341 aaPredicted RBP5.6□□□□□ -1.51
SS18L1-201ENST00000331758 Q5VV11 94 aa5.6□□□□□ -1.51
SS18L1-201ENST00000331758 Q8N1X5 172 aa5.6□□□□□ -1.51
SS18L1-201ENST00000331758 A8MU10 97 aa5.58□□□□□ -1.52
SS18L1-201ENST00000331758 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
SS18L1-201ENST00000331758 RBM12B-AS1Q9P1G2 102 aa5.58□□□□□ -1.52
SS18L1-201ENST00000331758 LCA10Q71F78 164 aa5.56□□□□□ -1.52
SS18L1-201ENST00000331758 NOTCH2NLQ7Z3S9 236 aa5.56□□□□□ -1.52
SS18L1-201ENST00000331758 HRES1P13985 223 aa5.56□□□□□ -1.52
SS18L1-201ENST00000331758 Q5VSD8 79 aa5.56□□□□□ -1.52
SS18L1-201ENST00000331758 DNAH3Q8TD57 4116 aa5.53□□□□□ -1.52
SS18L1-201ENST00000331758 Q5W150 140 aa5.53□□□□□ -1.52
SS18L1-201ENST00000331758 KRTAP13-2Q52LG2 175 aa5.52□□□□□ -1.53
SS18L1-201ENST00000331758 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
SS18L1-201ENST00000331758 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
SS18L1-201ENST00000331758 FBN3Q75N90 2809 aa5.48□□□□□ -1.53
SS18L1-201ENST00000331758 SPINK7P58062 85 aa5.48□□□□□ -1.53
SS18L1-201ENST00000331758 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
SS18L1-201ENST00000331758 Q6ZSA8 131 aa5.46□□□□□ -1.54
SS18L1-201ENST00000331758 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
SS18L1-201ENST00000331758 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
SS18L1-201ENST00000331758 MEGF8Q7Z7M0 2845 aa5.42□□□□□ -1.54
SS18L1-201ENST00000331758 AKAP9Q99996 3911 aa5.42□□□□□ -1.54
SS18L1-201ENST00000331758 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
SS18L1-201ENST00000331758 DMAC1Q96GE9 116 aa5.4□□□□□ -1.55
SS18L1-201ENST00000331758 A0A1B0GU33 70 aa5.38□□□□□ -1.55
SS18L1-201ENST00000331758 A0A0D9SG42 100 aa5.38□□□□□ -1.55
SS18L1-201ENST00000331758 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
SS18L1-201ENST00000331758 A6NN06 94 aa5.36□□□□□ -1.55
SS18L1-201ENST00000331758 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
SS18L1-201ENST00000331758 LINC01554Q52M75 96 aa5.35□□□□□ -1.55
SS18L1-201ENST00000331758 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
SS18L1-201ENST00000331758 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
SS18L1-201ENST00000331758 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
SS18L1-201ENST00000331758 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SS18L1-201ENST00000331758 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
SS18L1-201ENST00000331758 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
SS18L1-201ENST00000331758 HUWE1Q7Z6Z7 4374 aaKnown RBP5.25□□□□□ -1.57
SS18L1-201ENST00000331758 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
SS18L1-201ENST00000331758 DNAH6Q9C0G6 4158 aa5.24□□□□□ -1.57
SS18L1-201ENST00000331758 S4R3F8 94 aa5.24□□□□□ -1.57
SS18L1-201ENST00000331758 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
SS18L1-201ENST00000331758 ANK2Q01484 3957 aa5.22□□□□□ -1.57
SS18L1-201ENST00000331758 M0R2T5 61 aa5.21□□□□□ -1.58
SS18L1-201ENST00000331758 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
SS18L1-201ENST00000331758 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
SS18L1-201ENST00000331758 A8MUU9 505 aa5.19□□□□□ -1.58
SS18L1-201ENST00000331758 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
SS18L1-201ENST00000331758 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
SS18L1-201ENST00000331758 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
SS18L1-201ENST00000331758 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
SS18L1-201ENST00000331758 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
SS18L1-201ENST00000331758 ROMO1P60602 79 aa5.11□□□□□ -1.59
SS18L1-201ENST00000331758 R4GN34 69 aa5.1□□□□□ -1.59
SS18L1-201ENST00000331758 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
SS18L1-201ENST00000331758 XP32Q5T750 250 aa5.09□□□□□ -1.59
SS18L1-201ENST00000331758 DNHD1Q96M86 4753 aa5.09□□□□□ -1.59
SS18L1-201ENST00000331758 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
SS18L1-201ENST00000331758 PLECQ15149 4684 aaKnown RBP5.03□□□□□ -1.6
SS18L1-201ENST00000331758 M0QZ58 72 aa5.02□□□□□ -1.61
SS18L1-201ENST00000331758 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
SS18L1-201ENST00000331758 TPRXLQ17RH7 258 aa4.97□□□□□ -1.61
SS18L1-201ENST00000331758 DNAH10Q8IVF4 4471 aa4.95□□□□□ -1.62
SS18L1-201ENST00000331758 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
SS18L1-201ENST00000331758 PRKDCP78527 4128 aaKnown RBP4.93□□□□□ -1.62
SS18L1-201ENST00000331758 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
SS18L1-201ENST00000331758 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
SS18L1-201ENST00000331758 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
SS18L1-201ENST00000331758 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
SS18L1-201ENST00000331758 H0YAA0 97 aa4.88□□□□□ -1.63
SS18L1-201ENST00000331758 DNAH5Q8TE73 4624 aa4.87□□□□□ -1.63
SS18L1-201ENST00000331758 VPS13DQ5THJ4 4388 aa4.86□□□□□ -1.63
SS18L1-201ENST00000331758 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
SS18L1-201ENST00000331758 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
SS18L1-201ENST00000331758 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
SS18L1-201ENST00000331758 P0C880 135 aa4.8□□□□□ -1.64
SS18L1-201ENST00000331758 KRTAP3-3Q9BYR6 98 aa4.79□□□□□ -1.64
SS18L1-201ENST00000331758 KRTAP3-2Q9BYR7 98 aa4.79□□□□□ -1.64
SS18L1-201ENST00000331758 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms