RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
PKP3-201ENST00000331563 C8orf17Q9NRJ1 99 aa11.03□□□□□ -0.64
PKP3-201ENST00000331563 RTL8CO15255 209 aa11.02□□□□□ -0.65
PKP3-201ENST00000331563 CHTF8P0CG12 524 aa11.02□□□□□ -0.65
PKP3-201ENST00000331563 SPRR1BP22528 89 aa11.02□□□□□ -0.65
PKP3-201ENST00000331563 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.65
PKP3-201ENST00000331563 Q6ZR54 194 aa11.02□□□□□ -0.65
PKP3-201ENST00000331563 A0A087X002 238 aa10.99□□□□□ -0.65
PKP3-201ENST00000331563 CDK2AP2O75956 126 aa10.99□□□□□ -0.65
PKP3-201ENST00000331563 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
PKP3-201ENST00000331563 Q96NJ1 140 aa10.94□□□□□ -0.66
PKP3-201ENST00000331563 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
PKP3-201ENST00000331563 A0A1B0GVX0 72 aa10.92□□□□□ -0.66
PKP3-201ENST00000331563 VPS13DQ5THJ4 4388 aa10.9□□□□□ -0.66
PKP3-201ENST00000331563 CSAG1Q6PB30 78 aa10.89□□□□□ -0.67
PKP3-201ENST00000331563 DNAH2Q9P225 4427 aa10.88□□□□□ -0.67
PKP3-201ENST00000331563 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
PKP3-201ENST00000331563 NUPR2A6NF83 97 aa10.87□□□□□ -0.67
PKP3-201ENST00000331563 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
PKP3-201ENST00000331563 NOTCH2NLQ7Z3S9 236 aa10.86□□□□□ -0.67
PKP3-201ENST00000331563 ACYP2P14621 99 aa10.85□□□□□ -0.67
PKP3-201ENST00000331563 A0A1B0GU69 56 aa10.81□□□□□ -0.68
PKP3-201ENST00000331563 HECTD4Q9Y4D8 3996 aa10.81□□□□□ -0.68
PKP3-201ENST00000331563 SPINK6Q6UWN8 80 aa10.8□□□□□ -0.68
PKP3-201ENST00000331563 Q5W150 140 aa10.79□□□□□ -0.68
PKP3-201ENST00000331563 PANO1I0J062 215 aa10.78□□□□□ -0.68
PKP3-201ENST00000331563 MIR22HGQ0VDD5 57 aa10.78□□□□□ -0.68
PKP3-201ENST00000331563 Q6ZRN7 208 aaPredicted RBP10.78□□□□□ -0.68
PKP3-201ENST00000331563 C14orf177Q52M58 125 aa10.76□□□□□ -0.69
PKP3-201ENST00000331563 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
PKP3-201ENST00000331563 FRAS1Q86XX4 4008 aa10.73□□□□□ -0.69
PKP3-201ENST00000331563 UQCR11O14957 56 aa10.73□□□□□ -0.69
PKP3-201ENST00000331563 ANAPC11Q9NYG5 84 aa10.73□□□□□ -0.69
PKP3-201ENST00000331563 DNAH6Q9C0G6 4158 aa10.7□□□□□ -0.7
PKP3-201ENST00000331563 HYDINQ4G0P3 5121 aa10.7□□□□□ -0.7
PKP3-201ENST00000331563 LY6G6CO95867 125 aa10.7□□□□□ -0.7
PKP3-201ENST00000331563 C1orf134Q5TEV5 83 aa10.7□□□□□ -0.7
PKP3-201ENST00000331563 ZNF706Q9Y5V0 76 aaPredicted RBP10.7□□□□□ -0.7
PKP3-201ENST00000331563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
PKP3-201ENST00000331563 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
PKP3-201ENST00000331563 A0A087WTM6 91 aa10.65□□□□□ -0.7
PKP3-201ENST00000331563 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
PKP3-201ENST00000331563 LINC00483Q53H64 154 aa10.63□□□□□ -0.71
PKP3-201ENST00000331563 KRTAP13-3Q3SY46 172 aa10.63□□□□□ -0.71
PKP3-201ENST00000331563 ALMS1Q8TCU4 4167 aa10.63□□□□□ -0.71
PKP3-201ENST00000331563 ZNF861PO60384 105 aa10.62□□□□□ -0.71
PKP3-201ENST00000331563 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
PKP3-201ENST00000331563 DNAH8Q96JB1 4490 aa10.59□□□□□ -0.71
PKP3-201ENST00000331563 ROMO1P60602 79 aa10.58□□□□□ -0.72
PKP3-201ENST00000331563 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
PKP3-201ENST00000331563 CIRBP-AS1Q8TBR5 109 aa10.56□□□□□ -0.72
PKP3-201ENST00000331563 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
PKP3-201ENST00000331563 PSORS1C2Q9UIG4 136 aa10.53□□□□□ -0.72
PKP3-201ENST00000331563 DNAH5Q8TE73 4624 aa10.52□□□□□ -0.73
PKP3-201ENST00000331563 KRTAP21-3Q3LHN1 58 aa10.52□□□□□ -0.73
PKP3-201ENST00000331563 FAM229AH3BQW9 127 aa10.51□□□□□ -0.73
PKP3-201ENST00000331563 IGLV5-52A0A0A0MRZ9 124 aa10.5□□□□□ -0.73
PKP3-201ENST00000331563 KRTAP25-1Q3LHN0 102 aa10.47□□□□□ -0.73
PKP3-201ENST00000331563 KRTAP10-2P60368 255 aa10.47□□□□□ -0.73
PKP3-201ENST00000331563 IGKV2-30P06310 120 aa10.46□□□□□ -0.74
PKP3-201ENST00000331563 FAT2Q9NYQ8 4349 aa10.44□□□□□ -0.74
PKP3-201ENST00000331563 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
PKP3-201ENST00000331563 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
PKP3-201ENST00000331563 PKHD1P08F94 4074 aa10.42□□□□□ -0.74
PKP3-201ENST00000331563 PKD1P98161 4303 aa10.42□□□□□ -0.74
PKP3-201ENST00000331563 SPINK1P00995 79 aa10.4□□□□□ -0.74
PKP3-201ENST00000331563 IGLV7-43P04211 117 aa10.39□□□□□ -0.75
PKP3-201ENST00000331563 LRP1BQ9NZR2 4599 aa10.38□□□□□ -0.75
PKP3-201ENST00000331563 A8MUU9 505 aa10.32□□□□□ -0.76
PKP3-201ENST00000331563 KMT2CQ8NEZ4 4911 aaKnown RBP10.31□□□□□ -0.76
PKP3-201ENST00000331563 P0C880 135 aa10.29□□□□□ -0.76
PKP3-201ENST00000331563 VPS13BQ7Z7G8 4022 aa10.28□□□□□ -0.76
PKP3-201ENST00000331563 KRTAP10-1P60331 282 aa10.28□□□□□ -0.76
PKP3-201ENST00000331563 LINC00304Q8N9R0 145 aa10.27□□□□□ -0.77
PKP3-201ENST00000331563 SSBP3-AS1Q7Z2R9 100 aa10.26□□□□□ -0.77
PKP3-201ENST00000331563 Q8N1X5 172 aa10.22□□□□□ -0.77
PKP3-201ENST00000331563 KRTAP16-1A8MUX0 517 aa10.17□□□□□ -0.78
PKP3-201ENST00000331563 H0YAA0 97 aa10.17□□□□□ -0.78
PKP3-201ENST00000331563 FLG2Q5D862 2391 aaPredicted RBP10.13□□□□□ -0.79
PKP3-201ENST00000331563 Q6ZSA8 131 aa10.13□□□□□ -0.79
PKP3-201ENST00000331563 DYNC1H1Q14204 4646 aaKnown RBP10.11□□□□□ -0.79
PKP3-201ENST00000331563 RYR2Q92736 4967 aa10.1□□□□□ -0.79
PKP3-201ENST00000331563 FAT1Q14517 4588 aa10.1□□□□□ -0.79
PKP3-201ENST00000331563 CRIPTQ9P021 101 aa10.09□□□□□ -0.79
PKP3-201ENST00000331563 KRTAP13-2Q52LG2 175 aa10.05□□□□□ -0.8
PKP3-201ENST00000331563 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
PKP3-201ENST00000331563 A0A1B0GU33 70 aa10.04□□□□□ -0.8
PKP3-201ENST00000331563 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
PKP3-201ENST00000331563 RYR3Q15413 4870 aa10.01□□□□□ -0.81
PKP3-201ENST00000331563 APOBP04114 4563 aaKnown RBP9.95□□□□□ -0.82
PKP3-201ENST00000331563 K7ERS5 55 aa9.95□□□□□ -0.82
PKP3-201ENST00000331563 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
PKP3-201ENST00000331563 SPINT4Q6UDR6 99 aa9.93□□□□□ -0.82
PKP3-201ENST00000331563 A0A0A0MQY5 61 aa9.91□□□□□ -0.82
PKP3-201ENST00000331563 NDUFAF8A1L188 74 aa9.9□□□□□ -0.82
PKP3-201ENST00000331563 KRTAP1-4P0C5Y4 121 aa9.9□□□□□ -0.82
PKP3-201ENST00000331563 C20orf166-AS1Q96NR2 134 aa9.88□□□□□ -0.83
PKP3-201ENST00000331563 A0A1B0GVY2 172 aa9.87□□□□□ -0.83
PKP3-201ENST00000331563 KRTAP15-1Q3LI76 137 aa9.76□□□□□ -0.85
PKP3-201ENST00000331563 KRTAP3-1Q9BYR8 98 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms