RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
SNX20-202ENST00000330943 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
SNX20-202ENST00000330943 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
SNX20-202ENST00000330943 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
SNX20-202ENST00000330943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
SNX20-202ENST00000330943 LINC00483Q53H64 154 aa8.63□□□□□ -1.03
SNX20-202ENST00000330943 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
SNX20-202ENST00000330943 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
SNX20-202ENST00000330943 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
SNX20-202ENST00000330943 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
SNX20-202ENST00000330943 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
SNX20-202ENST00000330943 ZNF706Q9Y5V0 76 aaPredicted RBP8.59□□□□□ -1.03
SNX20-202ENST00000330943 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
SNX20-202ENST00000330943 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
SNX20-202ENST00000330943 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
SNX20-202ENST00000330943 Q5W150 140 aa8.57□□□□□ -1.04
SNX20-202ENST00000330943 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
SNX20-202ENST00000330943 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
SNX20-202ENST00000330943 DNAH2Q9P225 4427 aa8.53□□□□□ -1.04
SNX20-202ENST00000330943 VPS13DQ5THJ4 4388 aa8.53□□□□□ -1.04
SNX20-202ENST00000330943 IGLV5-52A0A0A0MRZ9 124 aa8.51□□□□□ -1.05
SNX20-202ENST00000330943 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
SNX20-202ENST00000330943 ACYP2P14621 99 aa8.5□□□□□ -1.05
SNX20-202ENST00000330943 ZNF861PO60384 105 aa8.49□□□□□ -1.05
SNX20-202ENST00000330943 DNAH8Q96JB1 4490 aa8.47□□□□□ -1.05
SNX20-202ENST00000330943 DNAH6Q9C0G6 4158 aa8.47□□□□□ -1.05
SNX20-202ENST00000330943 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
SNX20-202ENST00000330943 A0A087WTM6 91 aa8.45□□□□□ -1.06
SNX20-202ENST00000330943 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
SNX20-202ENST00000330943 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
SNX20-202ENST00000330943 RTL8CO15255 209 aa8.44□□□□□ -1.06
SNX20-202ENST00000330943 RETNLBQ9BQ08 111 aa8.43□□□□□ -1.06
SNX20-202ENST00000330943 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
SNX20-202ENST00000330943 LINC00313P59037 77 aa8.41□□□□□ -1.06
SNX20-202ENST00000330943 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SNX20-202ENST00000330943 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
SNX20-202ENST00000330943 A0A1B0GU69 56 aa8.39□□□□□ -1.07
SNX20-202ENST00000330943 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
SNX20-202ENST00000330943 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
SNX20-202ENST00000330943 NUPR2A6NF83 97 aa8.39□□□□□ -1.07
SNX20-202ENST00000330943 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
SNX20-202ENST00000330943 DNAH17Q9UFH2 4485 aa8.37□□□□□ -1.07
SNX20-202ENST00000330943 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
SNX20-202ENST00000330943 LY6G6CO95867 125 aa8.36□□□□□ -1.07
SNX20-202ENST00000330943 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
SNX20-202ENST00000330943 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
SNX20-202ENST00000330943 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
SNX20-202ENST00000330943 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
SNX20-202ENST00000330943 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
SNX20-202ENST00000330943 SPATA8Q6RVD6 105 aa8.3□□□□□ -1.08
SNX20-202ENST00000330943 PLA2G1BP04054 148 aaKnown RBP8.28□□□□□ -1.08
SNX20-202ENST00000330943 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
SNX20-202ENST00000330943 UQCR11O14957 56 aa8.26□□□□□ -1.09
SNX20-202ENST00000330943 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
SNX20-202ENST00000330943 H3BS24 57 aa8.24□□□□□ -1.09
SNX20-202ENST00000330943 DNAH5Q8TE73 4624 aa8.23□□□□□ -1.09
SNX20-202ENST00000330943 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.09
SNX20-202ENST00000330943 PKHD1P08F94 4074 aa8.21□□□□□ -1.09
SNX20-202ENST00000330943 KRTAP16-1A8MUX0 517 aa8.21□□□□□ -1.1
SNX20-202ENST00000330943 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
SNX20-202ENST00000330943 KRTAP10-2P60368 255 aa8.19□□□□□ -1.1
SNX20-202ENST00000330943 C1orf134Q5TEV5 83 aa8.19□□□□□ -1.1
SNX20-202ENST00000330943 FAT2Q9NYQ8 4349 aa8.18□□□□□ -1.1
SNX20-202ENST00000330943 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
SNX20-202ENST00000330943 SPINK1P00995 79 aa8.13□□□□□ -1.11
SNX20-202ENST00000330943 KRTAP21-3Q3LHN1 58 aa8.09□□□□□ -1.11
SNX20-202ENST00000330943 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
SNX20-202ENST00000330943 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
SNX20-202ENST00000330943 Q8N1X5 172 aa8.08□□□□□ -1.12
SNX20-202ENST00000330943 PKD1P98161 4303 aa8.06□□□□□ -1.12
SNX20-202ENST00000330943 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
SNX20-202ENST00000330943 FAT1Q14517 4588 aa8.03□□□□□ -1.12
SNX20-202ENST00000330943 KRTAP10-1P60331 282 aa8.02□□□□□ -1.12
SNX20-202ENST00000330943 SACSQ9NZJ4 4579 aa8.02□□□□□ -1.13
SNX20-202ENST00000330943 KMT2CQ8NEZ4 4911 aaKnown RBP8□□□□□ -1.13
SNX20-202ENST00000330943 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
SNX20-202ENST00000330943 Q6ZSA8 131 aa7.95□□□□□ -1.14
SNX20-202ENST00000330943 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
SNX20-202ENST00000330943 H0YAA0 97 aa7.94□□□□□ -1.14
SNX20-202ENST00000330943 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
SNX20-202ENST00000330943 A8MUU9 505 aa7.89□□□□□ -1.15
SNX20-202ENST00000330943 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
SNX20-202ENST00000330943 A0A1B0GU33 70 aa7.85□□□□□ -1.15
SNX20-202ENST00000330943 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
SNX20-202ENST00000330943 C9orf92A6NGG3 77 aa7.83□□□□□ -1.16
SNX20-202ENST00000330943 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
SNX20-202ENST00000330943 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
SNX20-202ENST00000330943 H1FX-AS1Q4G0G2 97 aa7.8□□□□□ -1.16
SNX20-202ENST00000330943 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
SNX20-202ENST00000330943 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
SNX20-202ENST00000330943 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
SNX20-202ENST00000330943 C20orf166-AS1Q96NR2 134 aa7.74□□□□□ -1.17
SNX20-202ENST00000330943 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
SNX20-202ENST00000330943 RYR2Q92736 4967 aa7.72□□□□□ -1.17
SNX20-202ENST00000330943 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
SNX20-202ENST00000330943 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
SNX20-202ENST00000330943 RYR3Q15413 4870 aa7.69□□□□□ -1.18
SNX20-202ENST00000330943 K7ERS5 55 aa7.67□□□□□ -1.18
SNX20-202ENST00000330943 ROMO1P60602 79 aa7.67□□□□□ -1.18
SNX20-202ENST00000330943 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms