RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 FBN1P35555 2871 aaKnown RBP8.54□□□□□ -1.04
EPHB3-201ENST00000330394 SPRR1BP22528 89 aa8.52□□□□□ -1.05
EPHB3-201ENST00000330394 TENM4Q6N022 2769 aa8.48□□□□□ -1.05
EPHB3-201ENST00000330394 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
EPHB3-201ENST00000330394 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
EPHB3-201ENST00000330394 PANO1I0J062 215 aa8.47□□□□□ -1.05
EPHB3-201ENST00000330394 A0A0D9SG42 100 aa8.46□□□□□ -1.05
EPHB3-201ENST00000330394 A0A087X002 238 aa8.46□□□□□ -1.06
EPHB3-201ENST00000330394 Q5W150 140 aa8.46□□□□□ -1.06
EPHB3-201ENST00000330394 NOTCH2NLQ7Z3S9 236 aa8.46□□□□□ -1.06
EPHB3-201ENST00000330394 H3BS24 57 aa8.45□□□□□ -1.06
EPHB3-201ENST00000330394 SMR3BP02814 79 aaPredicted RBP8.45□□□□□ -1.06
EPHB3-201ENST00000330394 LCE6AA0A183 80 aa8.45□□□□□ -1.06
EPHB3-201ENST00000330394 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
EPHB3-201ENST00000330394 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
EPHB3-201ENST00000330394 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
EPHB3-201ENST00000330394 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
EPHB3-201ENST00000330394 NBPF19A0A087WUL8 3843 aa8.4□□□□□ -1.07
EPHB3-201ENST00000330394 OTOGQ6ZRI0 2925 aa8.4□□□□□ -1.07
EPHB3-201ENST00000330394 BSNQ9UPA5 3926 aa8.39□□□□□ -1.07
EPHB3-201ENST00000330394 PKD1L1Q8TDX9 2849 aa8.39□□□□□ -1.07
EPHB3-201ENST00000330394 A0A1B0GU33 70 aa8.37□□□□□ -1.07
EPHB3-201ENST00000330394 Q6ZR54 194 aa8.37□□□□□ -1.07
EPHB3-201ENST00000330394 ZFHX3Q15911 3703 aa8.35□□□□□ -1.07
EPHB3-201ENST00000330394 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
EPHB3-201ENST00000330394 A6NN06 94 aa8.35□□□□□ -1.07
EPHB3-201ENST00000330394 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
EPHB3-201ENST00000330394 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
EPHB3-201ENST00000330394 TENM2Q9NT68 2774 aa8.25□□□□□ -1.09
EPHB3-201ENST00000330394 VPS13CQ709C8 3753 aa8.24□□□□□ -1.09
EPHB3-201ENST00000330394 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
EPHB3-201ENST00000330394 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
EPHB3-201ENST00000330394 TGP01266 2768 aa8.15□□□□□ -1.1
EPHB3-201ENST00000330394 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
EPHB3-201ENST00000330394 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
EPHB3-201ENST00000330394 KRTAP13-1Q8IUC0 172 aa8.08□□□□□ -1.12
EPHB3-201ENST00000330394 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
EPHB3-201ENST00000330394 KRTAP10-1P60331 282 aa8.05□□□□□ -1.12
EPHB3-201ENST00000330394 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
EPHB3-201ENST00000330394 H1FX-AS1Q4G0G2 97 aa8.02□□□□□ -1.13
EPHB3-201ENST00000330394 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
EPHB3-201ENST00000330394 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
EPHB3-201ENST00000330394 ROMO1P60602 79 aa7.95□□□□□ -1.14
EPHB3-201ENST00000330394 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
EPHB3-201ENST00000330394 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
EPHB3-201ENST00000330394 S4R3F8 94 aa7.88□□□□□ -1.15
EPHB3-201ENST00000330394 ZNF469Q96JG9 3925 aaPredicted RBP7.86□□□□□ -1.15
EPHB3-201ENST00000330394 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
EPHB3-201ENST00000330394 J3QL48 77 aa7.85□□□□□ -1.15
EPHB3-201ENST00000330394 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
EPHB3-201ENST00000330394 FBN3Q75N90 2809 aa7.85□□□□□ -1.15
EPHB3-201ENST00000330394 Q6ZSA8 131 aa7.83□□□□□ -1.16
EPHB3-201ENST00000330394 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
EPHB3-201ENST00000330394 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
EPHB3-201ENST00000330394 A8MUU9 505 aa7.75□□□□□ -1.17
EPHB3-201ENST00000330394 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
EPHB3-201ENST00000330394 R4GN34 69 aa7.74□□□□□ -1.17
EPHB3-201ENST00000330394 CSMD3Q7Z407 3707 aa7.73□□□□□ -1.17
EPHB3-201ENST00000330394 ANK3Q12955 4377 aaKnown RBP7.72□□□□□ -1.17
EPHB3-201ENST00000330394 H0YAA0 97 aa7.69□□□□□ -1.18
EPHB3-201ENST00000330394 M0QZ58 72 aa7.67□□□□□ -1.18
EPHB3-201ENST00000330394 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.18
EPHB3-201ENST00000330394 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
EPHB3-201ENST00000330394 KRTAP13-3Q3SY46 172 aa7.6□□□□□ -1.19
EPHB3-201ENST00000330394 KRTAP1-4P0C5Y4 121 aa7.59□□□□□ -1.19
EPHB3-201ENST00000330394 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
EPHB3-201ENST00000330394 Q5VSD8 79 aa7.56□□□□□ -1.2
EPHB3-201ENST00000330394 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
EPHB3-201ENST00000330394 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
EPHB3-201ENST00000330394 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
EPHB3-201ENST00000330394 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
EPHB3-201ENST00000330394 P0C880 135 aa7.36□□□□□ -1.23
EPHB3-201ENST00000330394 M0R2T5 61 aa7.33□□□□□ -1.24
EPHB3-201ENST00000330394 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
EPHB3-201ENST00000330394 XP32Q5T750 250 aa7.23□□□□□ -1.25
EPHB3-201ENST00000330394 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
EPHB3-201ENST00000330394 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
EPHB3-201ENST00000330394 KRTAP10-8P60410 259 aa7.18□□□□□ -1.26
EPHB3-201ENST00000330394 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
EPHB3-201ENST00000330394 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
EPHB3-201ENST00000330394 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
EPHB3-201ENST00000330394 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
EPHB3-201ENST00000330394 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
EPHB3-201ENST00000330394 TNP1P09430 55 aa7.02□□□□□ -1.29
EPHB3-201ENST00000330394 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
EPHB3-201ENST00000330394 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
EPHB3-201ENST00000330394 A0A1B0GVY2 172 aa6.93□□□□□ -1.3
EPHB3-201ENST00000330394 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
EPHB3-201ENST00000330394 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
EPHB3-201ENST00000330394 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
EPHB3-201ENST00000330394 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.32
EPHB3-201ENST00000330394 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
EPHB3-201ENST00000330394 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
EPHB3-201ENST00000330394 ANK2Q01484 3957 aa6.77□□□□□ -1.33
EPHB3-201ENST00000330394 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
EPHB3-201ENST00000330394 DNHD1Q96M86 4753 aa6.75□□□□□ -1.33
EPHB3-201ENST00000330394 DNAH1Q9P2D7 4330 aa6.75□□□□□ -1.33
EPHB3-201ENST00000330394 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
EPHB3-201ENST00000330394 LYSTQ99698 3801 aa6.69□□□□□ -1.34
EPHB3-201ENST00000330394 STARD9Q9P2P6 4700 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms