RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 HIGD2AQ9BW72 106 aa5.33□□□□□ -1.56
GDF3-201ENST00000329913 IGLV5-48A0A075B6I7 105 aa5.32□□□□□ -1.56
GDF3-201ENST00000329913 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
GDF3-201ENST00000329913 LINC00846Q9NV44 126 aa5.32□□□□□ -1.56
GDF3-201ENST00000329913 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
GDF3-201ENST00000329913 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
GDF3-201ENST00000329913 LINC01547P58512 204 aaPredicted RBP5.3□□□□□ -1.56
GDF3-201ENST00000329913 KRTAP13-3Q3SY46 172 aa5.3□□□□□ -1.56
GDF3-201ENST00000329913 ANAPC13Q9BS18 74 aa5.3□□□□□ -1.56
GDF3-201ENST00000329913 CXCL6P80162 114 aa5.29□□□□□ -1.56
GDF3-201ENST00000329913 Q8NBF4 154 aa5.29□□□□□ -1.56
GDF3-201ENST00000329913 ATOX1O00244 68 aa5.28□□□□□ -1.56
GDF3-201ENST00000329913 SPRR4Q96PI1 79 aa5.28□□□□□ -1.56
GDF3-201ENST00000329913 HIST1H4AP62805 103 aaKnown RBP5.27□□□□□ -1.57
GDF3-201ENST00000329913 ASB16-AS1Q495Z4 193 aa5.27□□□□□ -1.57
GDF3-201ENST00000329913 Q8N377 158 aa5.27□□□□□ -1.57
GDF3-201ENST00000329913 Q9BRP9 147 aa5.26□□□□□ -1.57
GDF3-201ENST00000329913 SPRR1BP22528 89 aa5.25□□□□□ -1.57
GDF3-201ENST00000329913 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
GDF3-201ENST00000329913 FAM236AA0A1B0GUQ0 79 aa5.24□□□□□ -1.57
GDF3-201ENST00000329913 FAM236BA0A1B0GV22 79 aa5.24□□□□□ -1.57
GDF3-201ENST00000329913 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
GDF3-201ENST00000329913 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
GDF3-201ENST00000329913 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
GDF3-201ENST00000329913 F8WEM9 126 aa5.23□□□□□ -1.57
GDF3-201ENST00000329913 Q6ZVQ6 151 aa5.23□□□□□ -1.57
GDF3-201ENST00000329913 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
GDF3-201ENST00000329913 UQCRQO14949 82 aa5.22□□□□□ -1.57
GDF3-201ENST00000329913 MOBPQ13875 183 aa5.22□□□□□ -1.57
GDF3-201ENST00000329913 SPAG11AQ6PDA7 123 aa5.22□□□□□ -1.57
GDF3-201ENST00000329913 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
GDF3-201ENST00000329913 NREPQ16612 68 aa5.21□□□□□ -1.58
GDF3-201ENST00000329913 IGKV3D-7A0A0C4DH55 119 aa5.2□□□□□ -1.58
GDF3-201ENST00000329913 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
GDF3-201ENST00000329913 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
GDF3-201ENST00000329913 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
GDF3-201ENST00000329913 COX7CP15954 63 aa5.19□□□□□ -1.58
GDF3-201ENST00000329913 MT1HP80294 61 aa5.19□□□□□ -1.58
GDF3-201ENST00000329913 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
GDF3-201ENST00000329913 SMIM29Q86T20 159 aa5.18□□□□□ -1.58
GDF3-201ENST00000329913 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
GDF3-201ENST00000329913 ZNF706Q9Y5V0 76 aaPredicted RBP5.18□□□□□ -1.58
GDF3-201ENST00000329913 C9orf92A6NGG3 77 aa5.16□□□□□ -1.58
GDF3-201ENST00000329913 BPY2O14599 106 aa5.16□□□□□ -1.58
GDF3-201ENST00000329913 SPINK1P00995 79 aa5.16□□□□□ -1.58
GDF3-201ENST00000329913 PCOTHQ58A44 107 aa5.16□□□□□ -1.58
GDF3-201ENST00000329913 ST20-AS1Q8NBB2 130 aa5.16□□□□□ -1.58
GDF3-201ENST00000329913 A0A1W2PNM2 257 aa5.15□□□□□ -1.59
GDF3-201ENST00000329913 LINC00483Q53H64 154 aa5.15□□□□□ -1.59
GDF3-201ENST00000329913 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.59
GDF3-201ENST00000329913 HRCT1Q6UXD1 115 aa5.14□□□□□ -1.59
GDF3-201ENST00000329913 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
GDF3-201ENST00000329913 TRAV7A0A075B6U4 112 aa5.13□□□□□ -1.59
GDF3-201ENST00000329913 A0A087WVE0 104 aa5.12□□□□□ -1.59
GDF3-201ENST00000329913 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
GDF3-201ENST00000329913 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
GDF3-201ENST00000329913 IGFL1Q6UW32 110 aa5.12□□□□□ -1.59
GDF3-201ENST00000329913 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
GDF3-201ENST00000329913 J3KT08 172 aa5.09□□□□□ -1.59
GDF3-201ENST00000329913 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
GDF3-201ENST00000329913 SS18L2Q9UHA2 77 aa5.09□□□□□ -1.59
GDF3-201ENST00000329913 M0R2T5 61 aa5.08□□□□□ -1.6
GDF3-201ENST00000329913 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
GDF3-201ENST00000329913 NDUFC1O43677 76 aa5.07□□□□□ -1.6
GDF3-201ENST00000329913 USH2AO75445 5202 aa5.06□□□□□ -1.6
GDF3-201ENST00000329913 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
GDF3-201ENST00000329913 TMEM258P61165 79 aa5.06□□□□□ -1.6
GDF3-201ENST00000329913 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
GDF3-201ENST00000329913 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
GDF3-201ENST00000329913 A0A087WSZ3 146 aa5.05□□□□□ -1.6
GDF3-201ENST00000329913 CD164Q04900 197 aa5.05□□□□□ -1.6
GDF3-201ENST00000329913 A0A0G2JQZ4 141 aa5.04□□□□□ -1.6
GDF3-201ENST00000329913 DSCR10P59022 87 aa5.04□□□□□ -1.6
GDF3-201ENST00000329913 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
GDF3-201ENST00000329913 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
GDF3-201ENST00000329913 LINC00472Q9H8W2 130 aa5.03□□□□□ -1.6
GDF3-201ENST00000329913 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
GDF3-201ENST00000329913 NDUFB1O75438 58 aa5.02□□□□□ -1.61
GDF3-201ENST00000329913 A8MWP4 228 aa5.01□□□□□ -1.61
GDF3-201ENST00000329913 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
GDF3-201ENST00000329913 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
GDF3-201ENST00000329913 C5orf47Q569G3 176 aa5□□□□□ -1.61
GDF3-201ENST00000329913 PRR15Q8IV56 129 aa5□□□□□ -1.61
GDF3-201ENST00000329913 H3BPC8 53 aa4.99□□□□□ -1.61
GDF3-201ENST00000329913 K7EQZ3 153 aa4.99□□□□□ -1.61
GDF3-201ENST00000329913 C20orf197Q8N268 126 aa4.99□□□□□ -1.61
GDF3-201ENST00000329913 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
GDF3-201ENST00000329913 Q5XG85 94 aa4.98□□□□□ -1.61
GDF3-201ENST00000329913 Q8N9L7 120 aa4.98□□□□□ -1.61
GDF3-201ENST00000329913 TMEM254Q8TBM7 123 aa4.97□□□□□ -1.61
GDF3-201ENST00000329913 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
GDF3-201ENST00000329913 H7BZZ5 65 aa4.95□□□□□ -1.62
GDF3-201ENST00000329913 C1orf195Q5TG92 126 aa4.95□□□□□ -1.62
GDF3-201ENST00000329913 TP53AIP1Q9HCN2 124 aa4.95□□□□□ -1.62
GDF3-201ENST00000329913 CASC2Q6XLA1 102 aa4.94□□□□□ -1.62
GDF3-201ENST00000329913 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
GDF3-201ENST00000329913 MP68P56378 58 aa4.93□□□□□ -1.62
GDF3-201ENST00000329913 Q96NJ1 140 aa4.93□□□□□ -1.62
GDF3-201ENST00000329913 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
GDF3-201ENST00000329913 FAM236DA0A1B0GTK5 79 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms