RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.61
LTBP3-202ENST00000322147 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
LTBP3-202ENST00000322147 KTN1-AS1Q86SY8 53 aa11.19□□□□□ -0.62
LTBP3-202ENST00000322147 KRTAP7-1Q8IUC3 87 aa11.18□□□□□ -0.62
LTBP3-202ENST00000322147 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
LTBP3-202ENST00000322147 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
LTBP3-202ENST00000322147 KRTAP10-2P60368 255 aa11.15□□□□□ -0.62
LTBP3-202ENST00000322147 LINC00472Q9H8W2 130 aa11.15□□□□□ -0.62
LTBP3-202ENST00000322147 KRTAP29-1A8MX34 341 aaPredicted RBP11.11□□□□□ -0.63
LTBP3-202ENST00000322147 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
LTBP3-202ENST00000322147 LCA10Q71F78 164 aa11.08□□□□□ -0.64
LTBP3-202ENST00000322147 Q75L30 129 aa11.07□□□□□ -0.64
LTBP3-202ENST00000322147 PLAC8Q9NZF1 115 aa11.06□□□□□ -0.64
LTBP3-202ENST00000322147 HRES1P13985 223 aa11.04□□□□□ -0.64
LTBP3-202ENST00000322147 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
LTBP3-202ENST00000322147 A0A087X002 238 aa11.03□□□□□ -0.64
LTBP3-202ENST00000322147 NOTCH2NLQ7Z3S9 236 aa11.03□□□□□ -0.64
LTBP3-202ENST00000322147 CDC42SE1Q9NRR8 79 aa11.03□□□□□ -0.64
LTBP3-202ENST00000322147 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
LTBP3-202ENST00000322147 UQCR11O14957 56 aa11.01□□□□□ -0.65
LTBP3-202ENST00000322147 SPRR1BP22528 89 aa11□□□□□ -0.65
LTBP3-202ENST00000322147 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
LTBP3-202ENST00000322147 MIR22HGQ0VDD5 57 aa10.97□□□□□ -0.65
LTBP3-202ENST00000322147 A0A0D9SG42 100 aa10.93□□□□□ -0.66
LTBP3-202ENST00000322147 SPINK7P58062 85 aa10.93□□□□□ -0.66
LTBP3-202ENST00000322147 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
LTBP3-202ENST00000322147 A6NN06 94 aa10.89□□□□□ -0.67
LTBP3-202ENST00000322147 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
LTBP3-202ENST00000322147 ANK3Q12955 4377 aaKnown RBP10.87□□□□□ -0.67
LTBP3-202ENST00000322147 Q5W150 140 aa10.87□□□□□ -0.67
LTBP3-202ENST00000322147 Q6ZRN7 208 aaPredicted RBP10.84□□□□□ -0.67
LTBP3-202ENST00000322147 LINC01554Q52M75 96 aa10.83□□□□□ -0.68
LTBP3-202ENST00000322147 Q6ZR54 194 aa10.82□□□□□ -0.68
LTBP3-202ENST00000322147 J3QL48 77 aa10.81□□□□□ -0.68
LTBP3-202ENST00000322147 PRAC1Q96KF2 57 aa10.78□□□□□ -0.68
LTBP3-202ENST00000322147 CSMD3Q7Z407 3707 aa10.73□□□□□ -0.69
LTBP3-202ENST00000322147 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
LTBP3-202ENST00000322147 SPINT4Q6UDR6 99 aa10.68□□□□□ -0.7
LTBP3-202ENST00000322147 COX6B2Q6YFQ2 88 aa10.68□□□□□ -0.7
LTBP3-202ENST00000322147 CRIPTQ9P021 101 aa10.67□□□□□ -0.7
LTBP3-202ENST00000322147 MEGF8Q7Z7M0 2845 aa10.6□□□□□ -0.71
LTBP3-202ENST00000322147 ADM2Q7Z4H4 148 aa10.59□□□□□ -0.71
LTBP3-202ENST00000322147 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
LTBP3-202ENST00000322147 A0A1B0GU33 70 aa10.59□□□□□ -0.71
LTBP3-202ENST00000322147 KRTAP13-2Q52LG2 175 aa10.58□□□□□ -0.72
LTBP3-202ENST00000322147 ASB16-AS1Q495Z4 193 aa10.56□□□□□ -0.72
LTBP3-202ENST00000322147 Q6ZSA8 131 aa10.51□□□□□ -0.73
LTBP3-202ENST00000322147 Q5VSD8 79 aa10.51□□□□□ -0.73
LTBP3-202ENST00000322147 DMAC1Q96GE9 116 aa10.46□□□□□ -0.73
LTBP3-202ENST00000322147 SPATA8Q6RVD6 105 aa10.41□□□□□ -0.74
LTBP3-202ENST00000322147 CSAG1Q6PB30 78 aa10.37□□□□□ -0.75
LTBP3-202ENST00000322147 H3BS24 57 aa10.33□□□□□ -0.76
LTBP3-202ENST00000322147 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
LTBP3-202ENST00000322147 S4R3F8 94 aa10.25□□□□□ -0.77
LTBP3-202ENST00000322147 DNHD1Q96M86 4753 aa10.22□□□□□ -0.77
LTBP3-202ENST00000322147 DNAH10Q8IVF4 4471 aa10.19□□□□□ -0.78
LTBP3-202ENST00000322147 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
LTBP3-202ENST00000322147 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
LTBP3-202ENST00000322147 ANK2Q01484 3957 aa10.14□□□□□ -0.79
LTBP3-202ENST00000322147 R4GN34 69 aa10.12□□□□□ -0.79
LTBP3-202ENST00000322147 M0R2T5 61 aa10.11□□□□□ -0.79
LTBP3-202ENST00000322147 H1FX-AS1Q4G0G2 97 aa10.11□□□□□ -0.79
LTBP3-202ENST00000322147 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
LTBP3-202ENST00000322147 M0QZ58 72 aa10.01□□□□□ -0.81
LTBP3-202ENST00000322147 CMYA5Q8N3K9 4069 aa10□□□□□ -0.81
LTBP3-202ENST00000322147 HUWE1Q7Z6Z7 4374 aaKnown RBP10□□□□□ -0.81
LTBP3-202ENST00000322147 DNAH1Q9P2D7 4330 aa9.97□□□□□ -0.81
LTBP3-202ENST00000322147 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
LTBP3-202ENST00000322147 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
LTBP3-202ENST00000322147 LYSTQ99698 3801 aa9.9□□□□□ -0.82
LTBP3-202ENST00000322147 KRTAP25-1Q3LHN0 102 aa9.89□□□□□ -0.83
LTBP3-202ENST00000322147 DNAH9Q9NYC9 4486 aa9.89□□□□□ -0.83
LTBP3-202ENST00000322147 ROMO1P60602 79 aa9.87□□□□□ -0.83
LTBP3-202ENST00000322147 A8MUU9 505 aa9.85□□□□□ -0.83
LTBP3-202ENST00000322147 H0YAA0 97 aa9.85□□□□□ -0.83
LTBP3-202ENST00000322147 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
LTBP3-202ENST00000322147 C20orf166-AS1Q96NR2 134 aa9.81□□□□□ -0.84
LTBP3-202ENST00000322147 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
LTBP3-202ENST00000322147 ALMS1Q8TCU4 4167 aa9.75□□□□□ -0.85
LTBP3-202ENST00000322147 XP32Q5T750 250 aa9.7□□□□□ -0.86
LTBP3-202ENST00000322147 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
LTBP3-202ENST00000322147 DNAH3Q8TD57 4116 aa9.69□□□□□ -0.86
LTBP3-202ENST00000322147 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
LTBP3-202ENST00000322147 LUZP6Q538Z0 58 aa9.67□□□□□ -0.86
LTBP3-202ENST00000322147 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
LTBP3-202ENST00000322147 C10orf95Q9H7T3 257 aa9.63□□□□□ -0.87
LTBP3-202ENST00000322147 DNAH7Q8WXX0 4024 aa9.61□□□□□ -0.87
LTBP3-202ENST00000322147 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
LTBP3-202ENST00000322147 P0C880 135 aa9.56□□□□□ -0.88
LTBP3-202ENST00000322147 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
LTBP3-202ENST00000322147 KRTAP3-1Q9BYR8 98 aa9.49□□□□□ -0.89
LTBP3-202ENST00000322147 STARD9Q9P2P6 4700 aa9.45□□□□□ -0.9
LTBP3-202ENST00000322147 DNAH17Q9UFH2 4485 aa9.45□□□□□ -0.9
LTBP3-202ENST00000322147 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
LTBP3-202ENST00000322147 NDUFAF8A1L188 74 aa9.37□□□□□ -0.91
LTBP3-202ENST00000322147 VPS13DQ5THJ4 4388 aa9.37□□□□□ -0.91
LTBP3-202ENST00000322147 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
LTBP3-202ENST00000322147 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
LTBP3-202ENST00000322147 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
LTBP3-202ENST00000322147 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms