RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 APLNQ9ULZ1 77 aa10.66□□□□□ -0.7
PRKCB-202ENST00000321728 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
PRKCB-202ENST00000321728 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
PRKCB-202ENST00000321728 MDFIQ99750 246 aa10.64□□□□□ -0.71
PRKCB-202ENST00000321728 ZNF706Q9Y5V0 76 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-202ENST00000321728 FRAS1Q86XX4 4008 aa10.64□□□□□ -0.71
PRKCB-202ENST00000321728 Q5W150 140 aa10.63□□□□□ -0.71
PRKCB-202ENST00000321728 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
PRKCB-202ENST00000321728 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
PRKCB-202ENST00000321728 ACYP2P14621 99 aa10.58□□□□□ -0.72
PRKCB-202ENST00000321728 PSORS1C2Q9UIG4 136 aa10.57□□□□□ -0.72
PRKCB-202ENST00000321728 Q6ZRN7 208 aaPredicted RBP10.54□□□□□ -0.72
PRKCB-202ENST00000321728 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
PRKCB-202ENST00000321728 TGP01266 2768 aa10.53□□□□□ -0.72
PRKCB-202ENST00000321728 STARD9Q9P2P6 4700 aa10.53□□□□□ -0.72
PRKCB-202ENST00000321728 IGLV5-52A0A0A0MRZ9 124 aa10.52□□□□□ -0.72
PRKCB-202ENST00000321728 ZNF861PO60384 105 aa10.51□□□□□ -0.73
PRKCB-202ENST00000321728 LINC00313P59037 77 aa10.51□□□□□ -0.73
PRKCB-202ENST00000321728 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
PRKCB-202ENST00000321728 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
PRKCB-202ENST00000321728 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
PRKCB-202ENST00000321728 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
PRKCB-202ENST00000321728 PRAC1Q96KF2 57 aa10.48□□□□□ -0.73
PRKCB-202ENST00000321728 RETNLBQ9BQ08 111 aa10.46□□□□□ -0.73
PRKCB-202ENST00000321728 A0A1B0GU69 56 aa10.46□□□□□ -0.74
PRKCB-202ENST00000321728 DMAC1Q96GE9 116 aa10.46□□□□□ -0.74
PRKCB-202ENST00000321728 HECTD4Q9Y4D8 3996 aa10.46□□□□□ -0.74
PRKCB-202ENST00000321728 DYNC2H1Q8NCM8 4307 aaKnown RBP10.45□□□□□ -0.74
PRKCB-202ENST00000321728 A0A087WTM6 91 aa10.43□□□□□ -0.74
PRKCB-202ENST00000321728 RTL8CO15255 209 aa10.42□□□□□ -0.74
PRKCB-202ENST00000321728 MEGF8Q7Z7M0 2845 aa10.41□□□□□ -0.74
PRKCB-202ENST00000321728 PRKDCP78527 4128 aaKnown RBP10.41□□□□□ -0.74
PRKCB-202ENST00000321728 ADM2Q7Z4H4 148 aa10.41□□□□□ -0.74
PRKCB-202ENST00000321728 FBN3Q75N90 2809 aa10.41□□□□□ -0.74
PRKCB-202ENST00000321728 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
PRKCB-202ENST00000321728 DNAH2Q9P225 4427 aa10.38□□□□□ -0.75
PRKCB-202ENST00000321728 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
PRKCB-202ENST00000321728 DNAH17Q9UFH2 4485 aa10.35□□□□□ -0.75
PRKCB-202ENST00000321728 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
PRKCB-202ENST00000321728 SPATA8Q6RVD6 105 aa10.34□□□□□ -0.75
PRKCB-202ENST00000321728 NUPR2A6NF83 97 aa10.34□□□□□ -0.75
PRKCB-202ENST00000321728 VPS13DQ5THJ4 4388 aa10.34□□□□□ -0.75
PRKCB-202ENST00000321728 IGLV7-43P04211 117 aa10.33□□□□□ -0.76
PRKCB-202ENST00000321728 IGKV2-30P06310 120 aa10.32□□□□□ -0.76
PRKCB-202ENST00000321728 MIR22HGQ0VDD5 57 aa10.32□□□□□ -0.76
PRKCB-202ENST00000321728 UQCR11O14957 56 aa10.3□□□□□ -0.76
PRKCB-202ENST00000321728 DNAH6Q9C0G6 4158 aa10.3□□□□□ -0.76
PRKCB-202ENST00000321728 SSBP3-AS1Q7Z2R9 100 aa10.29□□□□□ -0.76
PRKCB-202ENST00000321728 IGKV2D-30A0A075B6S6 120 aa10.24□□□□□ -0.77
PRKCB-202ENST00000321728 LINC01554Q52M75 96 aa10.23□□□□□ -0.77
PRKCB-202ENST00000321728 KRTAP16-1A8MUX0 517 aa10.15□□□□□ -0.78
PRKCB-202ENST00000321728 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
PRKCB-202ENST00000321728 LY6G6CO95867 125 aa10.13□□□□□ -0.79
PRKCB-202ENST00000321728 SPINK1P00995 79 aa10.12□□□□□ -0.79
PRKCB-202ENST00000321728 KRTAP13-2Q52LG2 175 aa10.12□□□□□ -0.79
PRKCB-202ENST00000321728 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
PRKCB-202ENST00000321728 C1orf134Q5TEV5 83 aa10.1□□□□□ -0.79
PRKCB-202ENST00000321728 KRTAP10-2P60368 255 aa10.1□□□□□ -0.79
PRKCB-202ENST00000321728 DNAH5Q8TE73 4624 aa10.07□□□□□ -0.8
PRKCB-202ENST00000321728 DNHD1Q96M86 4753 aa10.05□□□□□ -0.8
PRKCB-202ENST00000321728 C4orf48Q5BLP8 95 aa10.04□□□□□ -0.8
PRKCB-202ENST00000321728 Q8N1X5 172 aa10.03□□□□□ -0.8
PRKCB-202ENST00000321728 LRP1BQ9NZR2 4599 aa10.03□□□□□ -0.8
PRKCB-202ENST00000321728 HYDINQ4G0P3 5121 aa9.97□□□□□ -0.81
PRKCB-202ENST00000321728 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
PRKCB-202ENST00000321728 VPS13BQ7Z7G8 4022 aa9.91□□□□□ -0.82
PRKCB-202ENST00000321728 KRTAP1-4P0C5Y4 121 aa9.9□□□□□ -0.82
PRKCB-202ENST00000321728 Q6ZSA8 131 aa9.88□□□□□ -0.83
PRKCB-202ENST00000321728 FAT2Q9NYQ8 4349 aa9.88□□□□□ -0.83
PRKCB-202ENST00000321728 H0YAA0 97 aa9.86□□□□□ -0.83
PRKCB-202ENST00000321728 PKD1P98161 4303 aa9.86□□□□□ -0.83
PRKCB-202ENST00000321728 H3BS24 57 aa9.86□□□□□ -0.83
PRKCB-202ENST00000321728 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
PRKCB-202ENST00000321728 A8MUU9 505 aa9.82□□□□□ -0.84
PRKCB-202ENST00000321728 PKHD1P08F94 4074 aa9.78□□□□□ -0.84
PRKCB-202ENST00000321728 A0A1B0GU33 70 aa9.78□□□□□ -0.84
PRKCB-202ENST00000321728 LINC00304Q8N9R0 145 aa9.78□□□□□ -0.84
PRKCB-202ENST00000321728 KRTAP25-1Q3LHN0 102 aa9.74□□□□□ -0.85
PRKCB-202ENST00000321728 H1FX-AS1Q4G0G2 97 aa9.7□□□□□ -0.86
PRKCB-202ENST00000321728 FLG2Q5D862 2391 aaPredicted RBP9.69□□□□□ -0.86
PRKCB-202ENST00000321728 C9orf92A6NGG3 77 aa9.69□□□□□ -0.86
PRKCB-202ENST00000321728 KRTAP3-1Q9BYR8 98 aa9.67□□□□□ -0.86
PRKCB-202ENST00000321728 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
PRKCB-202ENST00000321728 CRIPTQ9P021 101 aa9.61□□□□□ -0.87
PRKCB-202ENST00000321728 ROMO1P60602 79 aa9.59□□□□□ -0.87
PRKCB-202ENST00000321728 K7ERS5 55 aa9.59□□□□□ -0.87
PRKCB-202ENST00000321728 RPS29P62273 56 aaKnown RBP9.58□□□□□ -0.88
PRKCB-202ENST00000321728 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
PRKCB-202ENST00000321728 FAT1Q14517 4588 aa9.56□□□□□ -0.88
PRKCB-202ENST00000321728 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.88
PRKCB-202ENST00000321728 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
PRKCB-202ENST00000321728 SACSQ9NZJ4 4579 aa9.42□□□□□ -0.9
PRKCB-202ENST00000321728 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
PRKCB-202ENST00000321728 A0A0D9SG42 100 aa9.34□□□□□ -0.91
PRKCB-202ENST00000321728 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
PRKCB-202ENST00000321728 P0C880 135 aa9.31□□□□□ -0.92
PRKCB-202ENST00000321728 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
PRKCB-202ENST00000321728 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
PRKCB-202ENST00000321728 KRTAP10-6P60371 365 aaPredicted RBP9.28□□□□□ -0.92
PRKCB-202ENST00000321728 KRTAP13-4Q3LI77 160 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms