RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 RBM12B-AS1Q9P1G2 102 aa10.04□□□□□ -0.8
SFXN1-201ENST00000321442 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
SFXN1-201ENST00000321442 LCA10Q71F78 164 aa10.03□□□□□ -0.8
SFXN1-201ENST00000321442 Q75L30 129 aa10.03□□□□□ -0.8
SFXN1-201ENST00000321442 Q8N1X5 172 aa10.01□□□□□ -0.81
SFXN1-201ENST00000321442 HRES1P13985 223 aa10.01□□□□□ -0.81
SFXN1-201ENST00000321442 SPINK7P58062 85 aa10□□□□□ -0.81
SFXN1-201ENST00000321442 ZCCHC13Q8WW36 166 aaKnown RBP9.99□□□□□ -0.81
SFXN1-201ENST00000321442 PANO1I0J062 215 aa9.98□□□□□ -0.81
SFXN1-201ENST00000321442 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
SFXN1-201ENST00000321442 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
SFXN1-201ENST00000321442 SPRR1BP22528 89 aa9.95□□□□□ -0.82
SFXN1-201ENST00000321442 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
SFXN1-201ENST00000321442 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
SFXN1-201ENST00000321442 A8MU10 97 aa9.93□□□□□ -0.82
SFXN1-201ENST00000321442 KRTAP7-1Q8IUC3 87 aa9.92□□□□□ -0.82
SFXN1-201ENST00000321442 ANK3Q12955 4377 aaKnown RBP9.9□□□□□ -0.82
SFXN1-201ENST00000321442 KRTAP10-2P60368 255 aa9.9□□□□□ -0.82
SFXN1-201ENST00000321442 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
SFXN1-201ENST00000321442 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
SFXN1-201ENST00000321442 A0A087X002 238 aa9.82□□□□□ -0.84
SFXN1-201ENST00000321442 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
SFXN1-201ENST00000321442 Q5W150 140 aa9.8□□□□□ -0.84
SFXN1-201ENST00000321442 LCE6AA0A183 80 aa9.8□□□□□ -0.84
SFXN1-201ENST00000321442 COL7A1Q02388 2944 aa9.79□□□□□ -0.84
SFXN1-201ENST00000321442 SPINT4Q6UDR6 99 aa9.78□□□□□ -0.84
SFXN1-201ENST00000321442 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
SFXN1-201ENST00000321442 PLAC8Q9NZF1 115 aa9.74□□□□□ -0.85
SFXN1-201ENST00000321442 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
SFXN1-201ENST00000321442 A0A0D9SG42 100 aa9.72□□□□□ -0.85
SFXN1-201ENST00000321442 Q6ZR54 194 aa9.71□□□□□ -0.85
SFXN1-201ENST00000321442 FBN3Q75N90 2809 aa9.71□□□□□ -0.85
SFXN1-201ENST00000321442 CSAG1Q6PB30 78 aa9.67□□□□□ -0.86
SFXN1-201ENST00000321442 A0A1B0GU33 70 aa9.64□□□□□ -0.87
SFXN1-201ENST00000321442 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
SFXN1-201ENST00000321442 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
SFXN1-201ENST00000321442 CSMD3Q7Z407 3707 aa9.62□□□□□ -0.87
SFXN1-201ENST00000321442 DMAC1Q96GE9 116 aa9.61□□□□□ -0.87
SFXN1-201ENST00000321442 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
SFXN1-201ENST00000321442 J3QL48 77 aa9.58□□□□□ -0.88
SFXN1-201ENST00000321442 A6NN06 94 aa9.56□□□□□ -0.88
SFXN1-201ENST00000321442 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
SFXN1-201ENST00000321442 AKAP9Q99996 3911 aa9.53□□□□□ -0.88
SFXN1-201ENST00000321442 H3BS24 57 aa9.51□□□□□ -0.89
SFXN1-201ENST00000321442 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
SFXN1-201ENST00000321442 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
SFXN1-201ENST00000321442 SPATA8Q6RVD6 105 aa9.41□□□□□ -0.9
SFXN1-201ENST00000321442 Q5VSD8 79 aa9.39□□□□□ -0.91
SFXN1-201ENST00000321442 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
SFXN1-201ENST00000321442 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
SFXN1-201ENST00000321442 KRTAP21-3Q3LHN1 58 aa9.23□□□□□ -0.93
SFXN1-201ENST00000321442 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
SFXN1-201ENST00000321442 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
SFXN1-201ENST00000321442 COX6B2Q6YFQ2 88 aa9.19□□□□□ -0.94
SFXN1-201ENST00000321442 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
SFXN1-201ENST00000321442 S4R3F8 94 aa9.14□□□□□ -0.95
SFXN1-201ENST00000321442 ROMO1P60602 79 aa9.13□□□□□ -0.95
SFXN1-201ENST00000321442 Q6ZSA8 131 aa9.12□□□□□ -0.95
SFXN1-201ENST00000321442 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
SFXN1-201ENST00000321442 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
SFXN1-201ENST00000321442 CAMK2N1Q7Z7J9 78 aa8.98□□□□□ -0.97
SFXN1-201ENST00000321442 R4GN34 69 aa8.96□□□□□ -0.97
SFXN1-201ENST00000321442 LUZP6Q538Z0 58 aa8.95□□□□□ -0.98
SFXN1-201ENST00000321442 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
SFXN1-201ENST00000321442 H0YAA0 97 aa8.87□□□□□ -0.99
SFXN1-201ENST00000321442 M0QZ58 72 aa8.87□□□□□ -0.99
SFXN1-201ENST00000321442 A8MUU9 505 aa8.87□□□□□ -0.99
SFXN1-201ENST00000321442 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
SFXN1-201ENST00000321442 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
SFXN1-201ENST00000321442 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
SFXN1-201ENST00000321442 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
SFXN1-201ENST00000321442 NDUFAF8A1L188 74 aa8.79□□□□□ -1
SFXN1-201ENST00000321442 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
SFXN1-201ENST00000321442 C20orf166-AS1Q96NR2 134 aa8.78□□□□□ -1
SFXN1-201ENST00000321442 M0R2T5 61 aa8.77□□□□□ -1.01
SFXN1-201ENST00000321442 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
SFXN1-201ENST00000321442 ANK2Q01484 3957 aa8.73□□□□□ -1.01
SFXN1-201ENST00000321442 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
SFXN1-201ENST00000321442 DNAH10Q8IVF4 4471 aa8.73□□□□□ -1.01
SFXN1-201ENST00000321442 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
SFXN1-201ENST00000321442 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
SFXN1-201ENST00000321442 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
SFXN1-201ENST00000321442 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
SFXN1-201ENST00000321442 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
SFXN1-201ENST00000321442 P0C880 135 aa8.53□□□□□ -1.04
SFXN1-201ENST00000321442 XP32Q5T750 250 aa8.5□□□□□ -1.05
SFXN1-201ENST00000321442 LYSTQ99698 3801 aa8.49□□□□□ -1.05
SFXN1-201ENST00000321442 DNAH1Q9P2D7 4330 aa8.48□□□□□ -1.05
SFXN1-201ENST00000321442 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
SFXN1-201ENST00000321442 KMT2AQ03164 3969 aa8.46□□□□□ -1.06
SFXN1-201ENST00000321442 FAT1Q14517 4588 aa8.46□□□□□ -1.06
SFXN1-201ENST00000321442 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
SFXN1-201ENST00000321442 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
SFXN1-201ENST00000321442 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
SFXN1-201ENST00000321442 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
SFXN1-201ENST00000321442 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
SFXN1-201ENST00000321442 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
SFXN1-201ENST00000321442 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
SFXN1-201ENST00000321442 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
SFXN1-201ENST00000321442 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms