RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CYP4F30PQ9H0H9 118 aa9.95□□□□□ -0.82
CLIP4-201ENST00000320081 MIR22HGQ0VDD5 57 aa9.94□□□□□ -0.82
CLIP4-201ENST00000320081 SPANXA2-OT1Q8N9U9 137 aa9.93□□□□□ -0.82
CLIP4-201ENST00000320081 A0A0D9SG42 100 aa9.91□□□□□ -0.82
CLIP4-201ENST00000320081 PLAC8Q9NZF1 115 aa9.9□□□□□ -0.82
CLIP4-201ENST00000320081 A0A087X002 238 aa9.9□□□□□ -0.83
CLIP4-201ENST00000320081 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.83
CLIP4-201ENST00000320081 ZNF469Q96JG9 3925 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-201ENST00000320081 IGLV7-46A0A075B6I9 117 aa9.88□□□□□ -0.83
CLIP4-201ENST00000320081 KTN1-AS1Q86SY8 53 aa9.88□□□□□ -0.83
CLIP4-201ENST00000320081 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
CLIP4-201ENST00000320081 SPRR1BP22528 89 aa9.85□□□□□ -0.83
CLIP4-201ENST00000320081 Q5VV11 94 aa9.84□□□□□ -0.83
CLIP4-201ENST00000320081 TRRAPQ9Y4A5 3859 aa9.83□□□□□ -0.84
CLIP4-201ENST00000320081 A8MU10 97 aa9.83□□□□□ -0.84
CLIP4-201ENST00000320081 LINC01554Q52M75 96 aa9.83□□□□□ -0.84
CLIP4-201ENST00000320081 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
CLIP4-201ENST00000320081 Q5W150 140 aa9.78□□□□□ -0.84
CLIP4-201ENST00000320081 SPINK7P58062 85 aa9.78□□□□□ -0.84
CLIP4-201ENST00000320081 J3QL48 77 aa9.76□□□□□ -0.85
CLIP4-201ENST00000320081 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
CLIP4-201ENST00000320081 PRAC1Q96KF2 57 aa9.75□□□□□ -0.85
CLIP4-201ENST00000320081 FBN3Q75N90 2809 aa9.73□□□□□ -0.85
CLIP4-201ENST00000320081 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
CLIP4-201ENST00000320081 ZCCHC13Q8WW36 166 aaKnown RBP9.71□□□□□ -0.86
CLIP4-201ENST00000320081 SPINT4Q6UDR6 99 aa9.7□□□□□ -0.86
CLIP4-201ENST00000320081 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
CLIP4-201ENST00000320081 CRIPTQ9P021 101 aa9.68□□□□□ -0.86
CLIP4-201ENST00000320081 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
CLIP4-201ENST00000320081 Q75L30 129 aa9.66□□□□□ -0.86
CLIP4-201ENST00000320081 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
CLIP4-201ENST00000320081 Q6ZR54 194 aa9.65□□□□□ -0.86
CLIP4-201ENST00000320081 LCA10Q71F78 164 aa9.63□□□□□ -0.87
CLIP4-201ENST00000320081 LINC01558Q9Y6Z2 57 aa9.62□□□□□ -0.87
CLIP4-201ENST00000320081 A0A1B0GU33 70 aa9.57□□□□□ -0.88
CLIP4-201ENST00000320081 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
CLIP4-201ENST00000320081 LCE6AA0A183 80 aa9.55□□□□□ -0.88
CLIP4-201ENST00000320081 Q6ZSA8 131 aa9.49□□□□□ -0.89
CLIP4-201ENST00000320081 KRTAP13-2Q52LG2 175 aa9.47□□□□□ -0.89
CLIP4-201ENST00000320081 KRTAP13-1Q8IUC0 172 aa9.45□□□□□ -0.9
CLIP4-201ENST00000320081 Q5VSD8 79 aa9.43□□□□□ -0.9
CLIP4-201ENST00000320081 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
CLIP4-201ENST00000320081 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
CLIP4-201ENST00000320081 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
CLIP4-201ENST00000320081 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
CLIP4-201ENST00000320081 SPATA8Q6RVD6 105 aa9.41□□□□□ -0.9
CLIP4-201ENST00000320081 ANK3Q12955 4377 aaKnown RBP9.39□□□□□ -0.91
CLIP4-201ENST00000320081 A6NN06 94 aa9.37□□□□□ -0.91
CLIP4-201ENST00000320081 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
CLIP4-201ENST00000320081 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
CLIP4-201ENST00000320081 H3BS24 57 aa9.31□□□□□ -0.92
CLIP4-201ENST00000320081 S4R3F8 94 aa9.26□□□□□ -0.93
CLIP4-201ENST00000320081 CAMK2N1Q7Z7J9 78 aa9.21□□□□□ -0.93
CLIP4-201ENST00000320081 M0R2T5 61 aa9.16□□□□□ -0.94
CLIP4-201ENST00000320081 R4GN34 69 aa9.15□□□□□ -0.94
CLIP4-201ENST00000320081 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
CLIP4-201ENST00000320081 RPL37P61927 97 aaKnown RBP9.1□□□□□ -0.95
CLIP4-201ENST00000320081 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
CLIP4-201ENST00000320081 KRTAP1-4P0C5Y4 121 aa9.07□□□□□ -0.96
CLIP4-201ENST00000320081 M0QZ58 72 aa9.05□□□□□ -0.96
CLIP4-201ENST00000320081 ROMO1P60602 79 aa8.94□□□□□ -0.98
CLIP4-201ENST00000320081 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
CLIP4-201ENST00000320081 LUZP6Q538Z0 58 aa8.83□□□□□ -1
CLIP4-201ENST00000320081 A8MUU9 505 aa8.82□□□□□ -1
CLIP4-201ENST00000320081 RPS29P62273 56 aaKnown RBP8.81□□□□□ -1
CLIP4-201ENST00000320081 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
CLIP4-201ENST00000320081 C20orf166-AS1Q96NR2 134 aa8.78□□□□□ -1
CLIP4-201ENST00000320081 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
CLIP4-201ENST00000320081 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.01
CLIP4-201ENST00000320081 H0YAA0 97 aa8.7□□□□□ -1.02
CLIP4-201ENST00000320081 XP32Q5T750 250 aa8.7□□□□□ -1.02
CLIP4-201ENST00000320081 ANK2Q01484 3957 aa8.64□□□□□ -1.03
CLIP4-201ENST00000320081 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
CLIP4-201ENST00000320081 P0C880 135 aa8.6□□□□□ -1.03
CLIP4-201ENST00000320081 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
CLIP4-201ENST00000320081 NDUFAF8A1L188 74 aa8.53□□□□□ -1.04
CLIP4-201ENST00000320081 HUWE1Q7Z6Z7 4374 aaKnown RBP8.51□□□□□ -1.05
CLIP4-201ENST00000320081 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
CLIP4-201ENST00000320081 DNHD1Q96M86 4753 aa8.46□□□□□ -1.05
CLIP4-201ENST00000320081 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
CLIP4-201ENST00000320081 DNAH10Q8IVF4 4471 aa8.41□□□□□ -1.06
CLIP4-201ENST00000320081 LYSTQ99698 3801 aa8.4□□□□□ -1.07
CLIP4-201ENST00000320081 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
CLIP4-201ENST00000320081 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
CLIP4-201ENST00000320081 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
CLIP4-201ENST00000320081 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
CLIP4-201ENST00000320081 PLECQ15149 4684 aaKnown RBP8.29□□□□□ -1.08
CLIP4-201ENST00000320081 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
CLIP4-201ENST00000320081 A0A0A0MQY5 61 aa8.25□□□□□ -1.09
CLIP4-201ENST00000320081 CMYA5Q8N3K9 4069 aa8.22□□□□□ -1.09
CLIP4-201ENST00000320081 DNAH11Q96DT5 4516 aa8.2□□□□□ -1.1
CLIP4-201ENST00000320081 STARD9Q9P2P6 4700 aa8.18□□□□□ -1.1
CLIP4-201ENST00000320081 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
CLIP4-201ENST00000320081 TNP1P09430 55 aa8.17□□□□□ -1.1
CLIP4-201ENST00000320081 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
CLIP4-201ENST00000320081 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
CLIP4-201ENST00000320081 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
CLIP4-201ENST00000320081 FAT1Q14517 4588 aa8.09□□□□□ -1.11
CLIP4-201ENST00000320081 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
CLIP4-201ENST00000320081 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms