RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 NDUFV3P56181 108 aaKnown RBP7.59□□□□□ -1.19
RPP40-201ENST00000319533 TEN1Q86WV5 123 aa7.59□□□□□ -1.19
RPP40-201ENST00000319533 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
RPP40-201ENST00000319533 H3BQ85 93 aa7.58□□□□□ -1.2
RPP40-201ENST00000319533 RPL37P61927 97 aaKnown RBP7.58□□□□□ -1.2
RPP40-201ENST00000319533 TRBV7-7A0A0K0K1E9 115 aa7.57□□□□□ -1.2
RPP40-201ENST00000319533 C14orf132Q9NPU4 83 aa7.55□□□□□ -1.2
RPP40-201ENST00000319533 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
RPP40-201ENST00000319533 M0R2T5 61 aa7.53□□□□□ -1.2
RPP40-201ENST00000319533 TRBV7-4A0A0J9YYF1 115 aa7.52□□□□□ -1.21
RPP40-201ENST00000319533 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
RPP40-201ENST00000319533 JMJD7-PLA2G4BH0Y9G9 81 aa7.51□□□□□ -1.21
RPP40-201ENST00000319533 SS18L2Q9UHA2 77 aa7.51□□□□□ -1.21
RPP40-201ENST00000319533 RBM3P98179 157 aaKnown RBP7.5□□□□□ -1.21
RPP40-201ENST00000319533 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
RPP40-201ENST00000319533 LOC110117498A0A087WWA1 95 aa7.49□□□□□ -1.21
RPP40-201ENST00000319533 Q6Q795 121 aa7.49□□□□□ -1.21
RPP40-201ENST00000319533 Q6ZQT0 140 aa7.49□□□□□ -1.21
RPP40-201ENST00000319533 A0A1W2PNM2 257 aa7.46□□□□□ -1.22
RPP40-201ENST00000319533 DSCR8Q96T75 97 aa7.46□□□□□ -1.22
RPP40-201ENST00000319533 KRTAP9-7A8MTY7 169 aa7.45□□□□□ -1.22
RPP40-201ENST00000319533 A0A087WSZ3 146 aa7.44□□□□□ -1.22
RPP40-201ENST00000319533 CCKP06307 115 aa7.44□□□□□ -1.22
RPP40-201ENST00000319533 VPS25Q9BRG1 176 aa7.42□□□□□ -1.22
RPP40-201ENST00000319533 PDE6GP18545 87 aa7.4□□□□□ -1.22
RPP40-201ENST00000319533 Q75L30 129 aa7.39□□□□□ -1.23
RPP40-201ENST00000319533 LCE1DQ5T752 114 aa7.38□□□□□ -1.23
RPP40-201ENST00000319533 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
RPP40-201ENST00000319533 ATP11AUNQ6ZP68 121 aa7.36□□□□□ -1.23
RPP40-201ENST00000319533 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
RPP40-201ENST00000319533 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
RPP40-201ENST00000319533 K7ERU9 68 aa7.35□□□□□ -1.23
RPP40-201ENST00000319533 SIGMAR1Q99720 223 aa7.35□□□□□ -1.23
RPP40-201ENST00000319533 USH2AO75445 5202 aa7.34□□□□□ -1.23
RPP40-201ENST00000319533 J3QR89 54 aa7.34□□□□□ -1.23
RPP40-201ENST00000319533 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
RPP40-201ENST00000319533 Q96NJ1 140 aa7.34□□□□□ -1.23
RPP40-201ENST00000319533 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
RPP40-201ENST00000319533 IGKV4-1P06312 121 aa7.31□□□□□ -1.24
RPP40-201ENST00000319533 ACYP1P07311 99 aa7.3□□□□□ -1.24
RPP40-201ENST00000319533 A0A1B0GW54 56 aa7.29□□□□□ -1.24
RPP40-201ENST00000319533 Q6ZVQ6 151 aa7.29□□□□□ -1.24
RPP40-201ENST00000319533 DSCR10P59022 87 aa7.27□□□□□ -1.25
RPP40-201ENST00000319533 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
RPP40-201ENST00000319533 LINC00472Q9H8W2 130 aa7.27□□□□□ -1.25
RPP40-201ENST00000319533 A8MUU9 505 aa7.25□□□□□ -1.25
RPP40-201ENST00000319533 LINC00313P59037 77 aa7.25□□□□□ -1.25
RPP40-201ENST00000319533 DEFB116Q30KQ4 102 aa7.25□□□□□ -1.25
RPP40-201ENST00000319533 NREPQ16612 68 aa7.24□□□□□ -1.25
RPP40-201ENST00000319533 UBL5Q9BZL1 73 aa7.24□□□□□ -1.25
RPP40-201ENST00000319533 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
RPP40-201ENST00000319533 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
RPP40-201ENST00000319533 J3KT08 172 aa7.21□□□□□ -1.26
RPP40-201ENST00000319533 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
RPP40-201ENST00000319533 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
RPP40-201ENST00000319533 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
RPP40-201ENST00000319533 MT-ATP8P03928 68 aa7.19□□□□□ -1.26
RPP40-201ENST00000319533 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
RPP40-201ENST00000319533 C8orf87E5RJ46 101 aa7.18□□□□□ -1.26
RPP40-201ENST00000319533 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
RPP40-201ENST00000319533 MT2AP02795 61 aa7.17□□□□□ -1.26
RPP40-201ENST00000319533 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
RPP40-201ENST00000319533 BPY2O14599 106 aa7.16□□□□□ -1.26
RPP40-201ENST00000319533 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
RPP40-201ENST00000319533 Q8N9L7 120 aa7.16□□□□□ -1.26
RPP40-201ENST00000319533 NDUFB1O75438 58 aa7.15□□□□□ -1.26
RPP40-201ENST00000319533 ATP5EP2Q5VTU8 51 aa7.15□□□□□ -1.26
RPP40-201ENST00000319533 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
RPP40-201ENST00000319533 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.26
RPP40-201ENST00000319533 K7EQZ3 153 aa7.14□□□□□ -1.27
RPP40-201ENST00000319533 CXCL6P80162 114 aa7.14□□□□□ -1.27
RPP40-201ENST00000319533 A8MWP4 228 aa7.11□□□□□ -1.27
RPP40-201ENST00000319533 MT1FP04733 61 aa7.11□□□□□ -1.27
RPP40-201ENST00000319533 MPLKIPQ8TAP9 179 aa7.11□□□□□ -1.27
RPP40-201ENST00000319533 A0A087WVE0 104 aa7.09□□□□□ -1.27
RPP40-201ENST00000319533 PRR15Q8IV56 129 aa7.08□□□□□ -1.28
RPP40-201ENST00000319533 HRES1P13985 223 aa7.07□□□□□ -1.28
RPP40-201ENST00000319533 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
RPP40-201ENST00000319533 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
RPP40-201ENST00000319533 FAM236DA0A1B0GTK5 79 aa7.05□□□□□ -1.28
RPP40-201ENST00000319533 FAM236CP0DP71 79 aa7.05□□□□□ -1.28
RPP40-201ENST00000319533 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
RPP40-201ENST00000319533 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
RPP40-201ENST00000319533 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
RPP40-201ENST00000319533 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
RPP40-201ENST00000319533 ZCCHC13Q8WW36 166 aaKnown RBP7.03□□□□□ -1.28
RPP40-201ENST00000319533 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
RPP40-201ENST00000319533 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
RPP40-201ENST00000319533 IMUPQ9GZP8 106 aa7.02□□□□□ -1.29
RPP40-201ENST00000319533 WFDC13Q8IUB5 93 aa7□□□□□ -1.29
RPP40-201ENST00000319533 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
RPP40-201ENST00000319533 HCG22E2RYF7 251 aa6.99□□□□□ -1.29
RPP40-201ENST00000319533 FAM236AA0A1B0GUQ0 79 aa6.97□□□□□ -1.29
RPP40-201ENST00000319533 FAM236BA0A1B0GV22 79 aa6.97□□□□□ -1.29
RPP40-201ENST00000319533 CASC2Q6XLA1 102 aa6.96□□□□□ -1.3
RPP40-201ENST00000319533 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
RPP40-201ENST00000319533 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
RPP40-201ENST00000319533 MRPL34Q9BQ48 92 aaKnown RBP6.95□□□□□ -1.3
RPP40-201ENST00000319533 SPINK7P58062 85 aa6.94□□□□□ -1.3
RPP40-201ENST00000319533 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms