RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ASB16-AS1Q495Z4 193 aa10.92□□□□□ -0.66
SPSB4-201ENST00000310546 Q96NJ1 140 aa10.92□□□□□ -0.66
SPSB4-201ENST00000310546 KMT2AQ03164 3969 aa10.9□□□□□ -0.66
SPSB4-201ENST00000310546 LINC01554Q52M75 96 aa10.87□□□□□ -0.67
SPSB4-201ENST00000310546 MRPL34Q9BQ48 92 aaKnown RBP10.86□□□□□ -0.67
SPSB4-201ENST00000310546 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
SPSB4-201ENST00000310546 A0A087X002 238 aa10.85□□□□□ -0.67
SPSB4-201ENST00000310546 NOTCH2NLQ7Z3S9 236 aa10.85□□□□□ -0.67
SPSB4-201ENST00000310546 A0A1B0GVX0 72 aa10.85□□□□□ -0.67
SPSB4-201ENST00000310546 APLNQ9ULZ1 77 aa10.84□□□□□ -0.67
SPSB4-201ENST00000310546 PLA2G1BP04054 148 aaKnown RBP10.82□□□□□ -0.68
SPSB4-201ENST00000310546 H3BS24 57 aa10.8□□□□□ -0.68
SPSB4-201ENST00000310546 ACYP2P14621 99 aa10.78□□□□□ -0.68
SPSB4-201ENST00000310546 Q5W150 140 aa10.78□□□□□ -0.68
SPSB4-201ENST00000310546 DYNC2H1Q8NCM8 4307 aaKnown RBP10.77□□□□□ -0.68
SPSB4-201ENST00000310546 A0A1B0GU69 56 aa10.77□□□□□ -0.69
SPSB4-201ENST00000310546 SPINK6Q6UWN8 80 aa10.72□□□□□ -0.69
SPSB4-201ENST00000310546 RTL8CO15255 209 aa10.72□□□□□ -0.69
SPSB4-201ENST00000310546 VPS13DQ5THJ4 4388 aa10.69□□□□□ -0.7
SPSB4-201ENST00000310546 NUPR2A6NF83 97 aa10.68□□□□□ -0.7
SPSB4-201ENST00000310546 LY6G6CO95867 125 aa10.68□□□□□ -0.7
SPSB4-201ENST00000310546 KRTAP13-1Q8IUC0 172 aa10.68□□□□□ -0.7
SPSB4-201ENST00000310546 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
SPSB4-201ENST00000310546 PANO1I0J062 215 aa10.68□□□□□ -0.7
SPSB4-201ENST00000310546 SPATA8Q6RVD6 105 aa10.68□□□□□ -0.7
SPSB4-201ENST00000310546 DNAH2Q9P225 4427 aa10.67□□□□□ -0.7
SPSB4-201ENST00000310546 MIR22HGQ0VDD5 57 aa10.67□□□□□ -0.7
SPSB4-201ENST00000310546 NBDYA0A0U1RRE5 68 aa10.66□□□□□ -0.7
SPSB4-201ENST00000310546 CSAG1Q6PB30 78 aa10.65□□□□□ -0.7
SPSB4-201ENST00000310546 ALMS1Q8TCU4 4167 aa10.63□□□□□ -0.71
SPSB4-201ENST00000310546 UQCR11O14957 56 aa10.63□□□□□ -0.71
SPSB4-201ENST00000310546 KRTAP13-3Q3SY46 172 aa10.62□□□□□ -0.71
SPSB4-201ENST00000310546 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
SPSB4-201ENST00000310546 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
SPSB4-201ENST00000310546 FRAS1Q86XX4 4008 aa10.62□□□□□ -0.71
SPSB4-201ENST00000310546 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
SPSB4-201ENST00000310546 WWC2-AS2Q96NR7 200 aa10.59□□□□□ -0.71
SPSB4-201ENST00000310546 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
SPSB4-201ENST00000310546 LINC00483Q53H64 154 aa10.55□□□□□ -0.72
SPSB4-201ENST00000310546 Q6ZRN7 208 aaPredicted RBP10.53□□□□□ -0.72
SPSB4-201ENST00000310546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.51□□□□□ -0.73
SPSB4-201ENST00000310546 DNAH6Q9C0G6 4158 aa10.51□□□□□ -0.73
SPSB4-201ENST00000310546 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
SPSB4-201ENST00000310546 HECTD4Q9Y4D8 3996 aa10.49□□□□□ -0.73
SPSB4-201ENST00000310546 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
SPSB4-201ENST00000310546 A0A087WTM6 91 aa10.44□□□□□ -0.74
SPSB4-201ENST00000310546 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
SPSB4-201ENST00000310546 FAM229AH3BQW9 127 aa10.42□□□□□ -0.74
SPSB4-201ENST00000310546 DNAH11Q96DT5 4516 aa10.42□□□□□ -0.74
SPSB4-201ENST00000310546 SPACA4Q8TDM5 124 aa10.41□□□□□ -0.74
SPSB4-201ENST00000310546 ZNF861PO60384 105 aa10.41□□□□□ -0.74
SPSB4-201ENST00000310546 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
SPSB4-201ENST00000310546 IGKV2-30P06310 120 aa10.4□□□□□ -0.75
SPSB4-201ENST00000310546 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
SPSB4-201ENST00000310546 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
SPSB4-201ENST00000310546 IGLV5-52A0A0A0MRZ9 124 aa10.36□□□□□ -0.75
SPSB4-201ENST00000310546 SPINK1P00995 79 aa10.36□□□□□ -0.75
SPSB4-201ENST00000310546 KRTAP10-2P60368 255 aa10.33□□□□□ -0.76
SPSB4-201ENST00000310546 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
SPSB4-201ENST00000310546 IGLV7-43P04211 117 aa10.32□□□□□ -0.76
SPSB4-201ENST00000310546 PKHD1P08F94 4074 aa10.3□□□□□ -0.76
SPSB4-201ENST00000310546 KMT2CQ8NEZ4 4911 aaKnown RBP10.29□□□□□ -0.76
SPSB4-201ENST00000310546 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
SPSB4-201ENST00000310546 SACSQ9NZJ4 4579 aa10.26□□□□□ -0.77
SPSB4-201ENST00000310546 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
SPSB4-201ENST00000310546 FAT2Q9NYQ8 4349 aa10.23□□□□□ -0.77
SPSB4-201ENST00000310546 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.78
SPSB4-201ENST00000310546 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
SPSB4-201ENST00000310546 ROMO1P60602 79 aa10.18□□□□□ -0.78
SPSB4-201ENST00000310546 Q8N1X5 172 aa10.18□□□□□ -0.78
SPSB4-201ENST00000310546 PKD1P98161 4303 aa10.17□□□□□ -0.78
SPSB4-201ENST00000310546 A8MUU9 505 aa10.16□□□□□ -0.78
SPSB4-201ENST00000310546 H0YAA0 97 aa10.15□□□□□ -0.78
SPSB4-201ENST00000310546 SSBP3-AS1Q7Z2R9 100 aa10.15□□□□□ -0.78
SPSB4-201ENST00000310546 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
SPSB4-201ENST00000310546 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
SPSB4-201ENST00000310546 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
SPSB4-201ENST00000310546 Q6ZSA8 131 aa10.13□□□□□ -0.79
SPSB4-201ENST00000310546 RYR2Q92736 4967 aa10.12□□□□□ -0.79
SPSB4-201ENST00000310546 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
SPSB4-201ENST00000310546 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
SPSB4-201ENST00000310546 VPS13BQ7Z7G8 4022 aa10.05□□□□□ -0.8
SPSB4-201ENST00000310546 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
SPSB4-201ENST00000310546 RYR3Q15413 4870 aa10.03□□□□□ -0.8
SPSB4-201ENST00000310546 FAT1Q14517 4588 aa10.03□□□□□ -0.8
SPSB4-201ENST00000310546 A0A1B0GU33 70 aa10□□□□□ -0.81
SPSB4-201ENST00000310546 KRTAP13-2Q52LG2 175 aa10□□□□□ -0.81
SPSB4-201ENST00000310546 DYNC1H1Q14204 4646 aaKnown RBP9.96□□□□□ -0.81
SPSB4-201ENST00000310546 P0C880 135 aa9.92□□□□□ -0.82
SPSB4-201ENST00000310546 H1FX-AS1Q4G0G2 97 aa9.89□□□□□ -0.83
SPSB4-201ENST00000310546 K7ERS5 55 aa9.85□□□□□ -0.83
SPSB4-201ENST00000310546 A0A1B0GVY2 172 aa9.83□□□□□ -0.84
SPSB4-201ENST00000310546 DMBT1Q9UGM3 2413 aaPredicted RBP9.82□□□□□ -0.84
SPSB4-201ENST00000310546 APOBP04114 4563 aaKnown RBP9.79□□□□□ -0.84
SPSB4-201ENST00000310546 KRTAP3-1Q9BYR8 98 aa9.74□□□□□ -0.85
SPSB4-201ENST00000310546 SPINT4Q6UDR6 99 aa9.73□□□□□ -0.85
SPSB4-201ENST00000310546 COX6B2Q6YFQ2 88 aa9.72□□□□□ -0.85
SPSB4-201ENST00000310546 KRTAP1-4P0C5Y4 121 aa9.71□□□□□ -0.85
SPSB4-201ENST00000310546 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
SPSB4-201ENST00000310546 KIAA1109Q2LD37 5005 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms