RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 FBN2P35556 2912 aa3.8□□□□□ -1.8
SEC22A-201ENST00000309934 SPRR1BP22528 89 aa3.8□□□□□ -1.8
SEC22A-201ENST00000309934 SPANXA2-OT1Q8N9U9 137 aa3.8□□□□□ -1.8
SEC22A-201ENST00000309934 PRLHP81277 87 aa3.79□□□□□ -1.8
SEC22A-201ENST00000309934 CHTF8P0CG12 524 aa3.79□□□□□ -1.8
SEC22A-201ENST00000309934 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
SEC22A-201ENST00000309934 FAM168BA1KXE4 195 aa3.78□□□□□ -1.8
SEC22A-201ENST00000309934 ASB16-AS1Q495Z4 193 aa3.78□□□□□ -1.8
SEC22A-201ENST00000309934 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
SEC22A-201ENST00000309934 A0A1W2PNN7 141 aa3.78□□□□□ -1.81
SEC22A-201ENST00000309934 IGLV7-43P04211 117 aa3.78□□□□□ -1.81
SEC22A-201ENST00000309934 ROMO1P60602 79 aa3.77□□□□□ -1.81
SEC22A-201ENST00000309934 Q6ZRN7 208 aaPredicted RBP3.77□□□□□ -1.81
SEC22A-201ENST00000309934 Q8N377 158 aa3.77□□□□□ -1.81
SEC22A-201ENST00000309934 SACSQ9NZJ4 4579 aa3.77□□□□□ -1.81
SEC22A-201ENST00000309934 ACYP2P14621 99 aa3.77□□□□□ -1.81
SEC22A-201ENST00000309934 KRTAP1-5Q9BYS1 174 aa3.77□□□□□ -1.81
SEC22A-201ENST00000309934 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
SEC22A-201ENST00000309934 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
SEC22A-201ENST00000309934 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
SEC22A-201ENST00000309934 A8MWP4 228 aa3.75□□□□□ -1.81
SEC22A-201ENST00000309934 K7EQZ3 153 aa3.75□□□□□ -1.81
SEC22A-201ENST00000309934 NIPBLQ6KC79 2804 aaeCLIP3.74□□□□□ -1.81
SEC22A-201ENST00000309934 A0A087WSZ3 146 aa3.74□□□□□ -1.81
SEC22A-201ENST00000309934 SPINK6Q6UWN8 80 aa3.74□□□□□ -1.81
SEC22A-201ENST00000309934 PSORS1C2Q9UIG4 136 aa3.74□□□□□ -1.81
SEC22A-201ENST00000309934 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
SEC22A-201ENST00000309934 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
SEC22A-201ENST00000309934 IGFL1Q6UW32 110 aa3.72□□□□□ -1.81
SEC22A-201ENST00000309934 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
SEC22A-201ENST00000309934 CIRBP-AS1Q8TBR5 109 aa3.72□□□□□ -1.81
SEC22A-201ENST00000309934 SPINK1P00995 79 aa3.71□□□□□ -1.81
SEC22A-201ENST00000309934 Q8NDZ9 215 aa3.71□□□□□ -1.82
SEC22A-201ENST00000309934 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.71□□□□□ -1.82
SEC22A-201ENST00000309934 C8orf17Q9NRJ1 99 aa3.71□□□□□ -1.82
SEC22A-201ENST00000309934 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
SEC22A-201ENST00000309934 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
SEC22A-201ENST00000309934 DNAH5Q8TE73 4624 aa3.69□□□□□ -1.82
SEC22A-201ENST00000309934 STAB2Q8WWQ8 2551 aa3.68□□□□□ -1.82
SEC22A-201ENST00000309934 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
SEC22A-201ENST00000309934 IGLV7-46A0A075B6I9 117 aa3.68□□□□□ -1.82
SEC22A-201ENST00000309934 ZANQ9Y493 2812 aa3.67□□□□□ -1.82
SEC22A-201ENST00000309934 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
SEC22A-201ENST00000309934 OTOGQ6ZRI0 2925 aa3.67□□□□□ -1.82
SEC22A-201ENST00000309934 COL7A1Q02388 2944 aa3.67□□□□□ -1.82
SEC22A-201ENST00000309934 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
SEC22A-201ENST00000309934 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
SEC22A-201ENST00000309934 MXRA5Q9NR99 2828 aa3.66□□□□□ -1.82
SEC22A-201ENST00000309934 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
SEC22A-201ENST00000309934 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
SEC22A-201ENST00000309934 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
SEC22A-201ENST00000309934 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
SEC22A-201ENST00000309934 Q6ZSA8 131 aa3.64□□□□□ -1.83
SEC22A-201ENST00000309934 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
SEC22A-201ENST00000309934 PLECQ15149 4684 aaKnown RBP3.63□□□□□ -1.83
SEC22A-201ENST00000309934 ZCCHC13Q8WW36 166 aaKnown RBP3.63□□□□□ -1.83
SEC22A-201ENST00000309934 MRPL34Q9BQ48 92 aaKnown RBP3.63□□□□□ -1.83
SEC22A-201ENST00000309934 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
SEC22A-201ENST00000309934 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
SEC22A-201ENST00000309934 KRTAP10-2P60368 255 aa3.61□□□□□ -1.83
SEC22A-201ENST00000309934 A0A087X002 238 aa3.6□□□□□ -1.83
SEC22A-201ENST00000309934 HRES1P13985 223 aa3.6□□□□□ -1.83
SEC22A-201ENST00000309934 MYCBP2O75592 4640 aa3.6□□□□□ -1.83
SEC22A-201ENST00000309934 DSCR10P59022 87 aa3.6□□□□□ -1.83
SEC22A-201ENST00000309934 NF1P21359 2839 aa3.59□□□□□ -1.83
SEC22A-201ENST00000309934 LINC00472Q9H8W2 130 aa3.59□□□□□ -1.83
SEC22A-201ENST00000309934 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.83
SEC22A-201ENST00000309934 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.84
SEC22A-201ENST00000309934 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.84
SEC22A-201ENST00000309934 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
SEC22A-201ENST00000309934 PANO1I0J062 215 aa3.57□□□□□ -1.84
SEC22A-201ENST00000309934 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
SEC22A-201ENST00000309934 NBEAL2Q6ZNJ1 2754 aa3.56□□□□□ -1.84
SEC22A-201ENST00000309934 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
SEC22A-201ENST00000309934 A8MUU9 505 aa3.55□□□□□ -1.84
SEC22A-201ENST00000309934 IGKV2D-30A0A075B6S6 120 aa3.54□□□□□ -1.84
SEC22A-201ENST00000309934 IGKV2-30P06310 120 aa3.54□□□□□ -1.84
SEC22A-201ENST00000309934 HYDINQ4G0P3 5121 aa3.53□□□□□ -1.84
SEC22A-201ENST00000309934 MMP24-AS1A0A0U1RRL7 71 aa3.52□□□□□ -1.85
SEC22A-201ENST00000309934 SMR3BP02814 79 aaPredicted RBP3.52□□□□□ -1.85
SEC22A-201ENST00000309934 KRTAP11-1Q8IUC1 163 aa3.52□□□□□ -1.85
SEC22A-201ENST00000309934 Q96NJ1 140 aa3.52□□□□□ -1.85
SEC22A-201ENST00000309934 Q5VSD8 79 aa3.52□□□□□ -1.85
SEC22A-201ENST00000309934 A0A0G2JQZ4 141 aa3.51□□□□□ -1.85
SEC22A-201ENST00000309934 ANAPC11Q9NYG5 84 aa3.51□□□□□ -1.85
SEC22A-201ENST00000309934 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
SEC22A-201ENST00000309934 Q8N1X5 172 aa3.49□□□□□ -1.85
SEC22A-201ENST00000309934 KRTAP29-1A8MX34 341 aaPredicted RBP3.48□□□□□ -1.85
SEC22A-201ENST00000309934 A0A1B0GU33 70 aa3.48□□□□□ -1.85
SEC22A-201ENST00000309934 PKD1L1Q8TDX9 2849 aa3.47□□□□□ -1.85
SEC22A-201ENST00000309934 TENM1Q9UKZ4 2725 aa3.46□□□□□ -1.85
SEC22A-201ENST00000309934 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
SEC22A-201ENST00000309934 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
SEC22A-201ENST00000309934 A0A0D9SG42 100 aa3.43□□□□□ -1.86
SEC22A-201ENST00000309934 Q5W150 140 aa3.43□□□□□ -1.86
SEC22A-201ENST00000309934 P0C880 135 aa3.42□□□□□ -1.86
SEC22A-201ENST00000309934 TGP01266 2768 aa3.42□□□□□ -1.86
SEC22A-201ENST00000309934 FAT1Q14517 4588 aa3.41□□□□□ -1.86
SEC22A-201ENST00000309934 TENM2Q9NT68 2774 aa3.4□□□□□ -1.86
SEC22A-201ENST00000309934 TENM3Q9P273 2699 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms