RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
SEC23A-201ENST00000307712 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
SEC23A-201ENST00000307712 A0A087X002 238 aa8.09□□□□□ -1.11
SEC23A-201ENST00000307712 NOTCH2NLQ7Z3S9 236 aa8.09□□□□□ -1.11
SEC23A-201ENST00000307712 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.12
SEC23A-201ENST00000307712 Q6ZR54 194 aa8.07□□□□□ -1.12
SEC23A-201ENST00000307712 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
SEC23A-201ENST00000307712 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
SEC23A-201ENST00000307712 Q8N1X5 172 aa8.04□□□□□ -1.12
SEC23A-201ENST00000307712 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.12
SEC23A-201ENST00000307712 Q5W150 140 aa8.02□□□□□ -1.13
SEC23A-201ENST00000307712 OTOGQ6ZRI0 2925 aa8.01□□□□□ -1.13
SEC23A-201ENST00000307712 A6NN06 94 aa8.01□□□□□ -1.13
SEC23A-201ENST00000307712 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
SEC23A-201ENST00000307712 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
SEC23A-201ENST00000307712 PLAC8Q9NZF1 115 aa7.97□□□□□ -1.13
SEC23A-201ENST00000307712 DMBT1Q9UGM3 2413 aaPredicted RBP7.96□□□□□ -1.14
SEC23A-201ENST00000307712 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
SEC23A-201ENST00000307712 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
SEC23A-201ENST00000307712 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
SEC23A-201ENST00000307712 C9orf92A6NGG3 77 aa7.9□□□□□ -1.14
SEC23A-201ENST00000307712 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
SEC23A-201ENST00000307712 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
SEC23A-201ENST00000307712 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
SEC23A-201ENST00000307712 TENM2Q9NT68 2774 aa7.86□□□□□ -1.15
SEC23A-201ENST00000307712 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
SEC23A-201ENST00000307712 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
SEC23A-201ENST00000307712 TRRAPQ9Y4A5 3859 aa7.84□□□□□ -1.15
SEC23A-201ENST00000307712 Q6ZRN7 208 aaPredicted RBP7.84□□□□□ -1.16
SEC23A-201ENST00000307712 SMR3BP02814 79 aaPredicted RBP7.8□□□□□ -1.16
SEC23A-201ENST00000307712 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
SEC23A-201ENST00000307712 A0A1B0GU33 70 aa7.78□□□□□ -1.16
SEC23A-201ENST00000307712 ASB16-AS1Q495Z4 193 aa7.77□□□□□ -1.17
SEC23A-201ENST00000307712 H3BS24 57 aa7.75□□□□□ -1.17
SEC23A-201ENST00000307712 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
SEC23A-201ENST00000307712 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
SEC23A-201ENST00000307712 CRIPTQ9P021 101 aa7.73□□□□□ -1.17
SEC23A-201ENST00000307712 ANK3Q12955 4377 aaKnown RBP7.73□□□□□ -1.17
SEC23A-201ENST00000307712 TGP01266 2768 aa7.72□□□□□ -1.17
SEC23A-201ENST00000307712 ZNF469Q96JG9 3925 aaPredicted RBP7.72□□□□□ -1.17
SEC23A-201ENST00000307712 A0A0D9SG42 100 aa7.71□□□□□ -1.17
SEC23A-201ENST00000307712 KRTAP10-1P60331 282 aa7.67□□□□□ -1.18
SEC23A-201ENST00000307712 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.18
SEC23A-201ENST00000307712 AKAP9Q99996 3911 aa7.58□□□□□ -1.2
SEC23A-201ENST00000307712 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
SEC23A-201ENST00000307712 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
SEC23A-201ENST00000307712 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
SEC23A-201ENST00000307712 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
SEC23A-201ENST00000307712 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.21
SEC23A-201ENST00000307712 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
SEC23A-201ENST00000307712 Q6ZSA8 131 aa7.44□□□□□ -1.22
SEC23A-201ENST00000307712 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
SEC23A-201ENST00000307712 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
SEC23A-201ENST00000307712 ROMO1P60602 79 aa7.42□□□□□ -1.22
SEC23A-201ENST00000307712 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
SEC23A-201ENST00000307712 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
SEC23A-201ENST00000307712 H0YAA0 97 aa7.36□□□□□ -1.23
SEC23A-201ENST00000307712 MEGF8Q7Z7M0 2845 aa7.35□□□□□ -1.23
SEC23A-201ENST00000307712 S4R3F8 94 aa7.33□□□□□ -1.24
SEC23A-201ENST00000307712 A8MUU9 505 aa7.32□□□□□ -1.24
SEC23A-201ENST00000307712 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
SEC23A-201ENST00000307712 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
SEC23A-201ENST00000307712 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.27
SEC23A-201ENST00000307712 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
SEC23A-201ENST00000307712 NDUFAF8A1L188 74 aa7.12□□□□□ -1.27
SEC23A-201ENST00000307712 DNAH10Q8IVF4 4471 aa7.1□□□□□ -1.27
SEC23A-201ENST00000307712 J3QL48 77 aa7.09□□□□□ -1.27
SEC23A-201ENST00000307712 R4GN34 69 aa7.08□□□□□ -1.28
SEC23A-201ENST00000307712 Q5VSD8 79 aa7.06□□□□□ -1.28
SEC23A-201ENST00000307712 M0QZ58 72 aa7.05□□□□□ -1.28
SEC23A-201ENST00000307712 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
SEC23A-201ENST00000307712 LUZP6Q538Z0 58 aa7.02□□□□□ -1.29
SEC23A-201ENST00000307712 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
SEC23A-201ENST00000307712 P0C880 135 aa6.98□□□□□ -1.29
SEC23A-201ENST00000307712 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.31
SEC23A-201ENST00000307712 XP32Q5T750 250 aa6.9□□□□□ -1.31
SEC23A-201ENST00000307712 KRTAP21-3Q3LHN1 58 aa6.88□□□□□ -1.31
SEC23A-201ENST00000307712 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
SEC23A-201ENST00000307712 DNAH9Q9NYC9 4486 aa6.85□□□□□ -1.31
SEC23A-201ENST00000307712 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
SEC23A-201ENST00000307712 DNAH1Q9P2D7 4330 aa6.83□□□□□ -1.32
SEC23A-201ENST00000307712 ANK2Q01484 3957 aa6.82□□□□□ -1.32
SEC23A-201ENST00000307712 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
SEC23A-201ENST00000307712 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
SEC23A-201ENST00000307712 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
SEC23A-201ENST00000307712 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
SEC23A-201ENST00000307712 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
SEC23A-201ENST00000307712 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
SEC23A-201ENST00000307712 DNAH8Q96JB1 4490 aa6.75□□□□□ -1.33
SEC23A-201ENST00000307712 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
SEC23A-201ENST00000307712 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
SEC23A-201ENST00000307712 LYSTQ99698 3801 aa6.68□□□□□ -1.34
SEC23A-201ENST00000307712 DNHD1Q96M86 4753 aa6.67□□□□□ -1.34
SEC23A-201ENST00000307712 VPS13DQ5THJ4 4388 aa6.65□□□□□ -1.34
SEC23A-201ENST00000307712 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.34
SEC23A-201ENST00000307712 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.35
SEC23A-201ENST00000307712 A0A1B0GVY2 172 aa6.65□□□□□ -1.35
SEC23A-201ENST00000307712 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.35
SEC23A-201ENST00000307712 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.35
SEC23A-201ENST00000307712 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms