RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
LRRC28-201ENST00000301981 TENM3Q9P273 2699 aa4.71□□□□□ -1.66
LRRC28-201ENST00000301981 TNP2Q05952 138 aa4.71□□□□□ -1.66
LRRC28-201ENST00000301981 PKD1L1Q8TDX9 2849 aa4.7□□□□□ -1.66
LRRC28-201ENST00000301981 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
LRRC28-201ENST00000301981 SPRR1AP35321 89 aa4.7□□□□□ -1.66
LRRC28-201ENST00000301981 TRRAPQ9Y4A5 3859 aa4.7□□□□□ -1.66
LRRC28-201ENST00000301981 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
LRRC28-201ENST00000301981 HRES1P13985 223 aa4.69□□□□□ -1.66
LRRC28-201ENST00000301981 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
LRRC28-201ENST00000301981 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
LRRC28-201ENST00000301981 SSBP3-AS1Q7Z2R9 100 aa4.68□□□□□ -1.66
LRRC28-201ENST00000301981 A0A0D9SG42 100 aa4.68□□□□□ -1.66
LRRC28-201ENST00000301981 LCE6AA0A183 80 aa4.68□□□□□ -1.66
LRRC28-201ENST00000301981 CSMD3Q7Z407 3707 aa4.67□□□□□ -1.66
LRRC28-201ENST00000301981 LINC00472Q9H8W2 130 aa4.67□□□□□ -1.66
LRRC28-201ENST00000301981 KRTAP4-16G5E9R7 235 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-201ENST00000301981 UQCR11O14957 56 aa4.66□□□□□ -1.66
LRRC28-201ENST00000301981 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
LRRC28-201ENST00000301981 ZNF469Q96JG9 3925 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-201ENST00000301981 IGLV7-46A0A075B6I9 117 aa4.65□□□□□ -1.67
LRRC28-201ENST00000301981 A6NN06 94 aa4.64□□□□□ -1.67
LRRC28-201ENST00000301981 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
LRRC28-201ENST00000301981 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
LRRC28-201ENST00000301981 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
LRRC28-201ENST00000301981 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
LRRC28-201ENST00000301981 AKAP9Q99996 3911 aa4.61□□□□□ -1.67
LRRC28-201ENST00000301981 Q5VSD8 79 aa4.61□□□□□ -1.67
LRRC28-201ENST00000301981 Q5W150 140 aa4.61□□□□□ -1.67
LRRC28-201ENST00000301981 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
LRRC28-201ENST00000301981 OTOGQ6ZRI0 2925 aa4.6□□□□□ -1.67
LRRC28-201ENST00000301981 KRTAP10-2P60368 255 aa4.59□□□□□ -1.67
LRRC28-201ENST00000301981 LINC00304Q8N9R0 145 aa4.59□□□□□ -1.67
LRRC28-201ENST00000301981 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.68
LRRC28-201ENST00000301981 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
LRRC28-201ENST00000301981 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
LRRC28-201ENST00000301981 TENM2Q9NT68 2774 aa4.54□□□□□ -1.68
LRRC28-201ENST00000301981 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
LRRC28-201ENST00000301981 SPRR1BP22528 89 aa4.51□□□□□ -1.69
LRRC28-201ENST00000301981 LINC00483Q53H64 154 aa4.51□□□□□ -1.69
LRRC28-201ENST00000301981 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
LRRC28-201ENST00000301981 PLAC8Q9NZF1 115 aa4.5□□□□□ -1.69
LRRC28-201ENST00000301981 ANK3Q12955 4377 aaKnown RBP4.48□□□□□ -1.69
LRRC28-201ENST00000301981 A0A1B0GU33 70 aa4.46□□□□□ -1.69
LRRC28-201ENST00000301981 Q6ZR54 194 aa4.45□□□□□ -1.7
LRRC28-201ENST00000301981 TGP01266 2768 aa4.45□□□□□ -1.7
LRRC28-201ENST00000301981 Q6ZRN7 208 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-201ENST00000301981 COL7A1Q02388 2944 aa4.41□□□□□ -1.7
LRRC28-201ENST00000301981 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
LRRC28-201ENST00000301981 KRTAP13-2Q52LG2 175 aa4.4□□□□□ -1.71
LRRC28-201ENST00000301981 KRTAP13-1Q8IUC0 172 aa4.39□□□□□ -1.71
LRRC28-201ENST00000301981 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
LRRC28-201ENST00000301981 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
LRRC28-201ENST00000301981 ROMO1P60602 79 aa4.37□□□□□ -1.71
LRRC28-201ENST00000301981 FBN3Q75N90 2809 aa4.35□□□□□ -1.71
LRRC28-201ENST00000301981 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
LRRC28-201ENST00000301981 KRTAP16-1A8MUX0 517 aa4.33□□□□□ -1.72
LRRC28-201ENST00000301981 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
LRRC28-201ENST00000301981 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
LRRC28-201ENST00000301981 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
LRRC28-201ENST00000301981 Q6ZSA8 131 aa4.29□□□□□ -1.72
LRRC28-201ENST00000301981 S4R3F8 94 aa4.28□□□□□ -1.72
LRRC28-201ENST00000301981 A8MUU9 505 aa4.25□□□□□ -1.73
LRRC28-201ENST00000301981 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
LRRC28-201ENST00000301981 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
LRRC28-201ENST00000301981 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
LRRC28-201ENST00000301981 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
LRRC28-201ENST00000301981 DNAH10Q8IVF4 4471 aa4.21□□□□□ -1.74
LRRC28-201ENST00000301981 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
LRRC28-201ENST00000301981 H0YAA0 97 aa4.18□□□□□ -1.74
LRRC28-201ENST00000301981 KRTAP1-4P0C5Y4 121 aa4.18□□□□□ -1.74
LRRC28-201ENST00000301981 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
LRRC28-201ENST00000301981 M0QZ58 72 aa4.17□□□□□ -1.74
LRRC28-201ENST00000301981 HUWE1Q7Z6Z7 4374 aaKnown RBP4.17□□□□□ -1.74
LRRC28-201ENST00000301981 R4GN34 69 aa4.16□□□□□ -1.74
LRRC28-201ENST00000301981 LYSTQ99698 3801 aa4.12□□□□□ -1.75
LRRC28-201ENST00000301981 KRTAP13-3Q3SY46 172 aa4.1□□□□□ -1.75
LRRC28-201ENST00000301981 ANK2Q01484 3957 aa4.07□□□□□ -1.76
LRRC28-201ENST00000301981 P0C880 135 aa4.05□□□□□ -1.76
LRRC28-201ENST00000301981 FRAS1Q86XX4 4008 aa4□□□□□ -1.77
LRRC28-201ENST00000301981 A0A1B0GVY2 172 aa3.99□□□□□ -1.77
LRRC28-201ENST00000301981 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
LRRC28-201ENST00000301981 XP32Q5T750 250 aa3.99□□□□□ -1.77
LRRC28-201ENST00000301981 PLECQ15149 4684 aaKnown RBP3.98□□□□□ -1.77
LRRC28-201ENST00000301981 DNAH9Q9NYC9 4486 aa3.95□□□□□ -1.78
LRRC28-201ENST00000301981 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
LRRC28-201ENST00000301981 RPS29P62273 56 aaKnown RBP3.94□□□□□ -1.78
LRRC28-201ENST00000301981 DNAH1Q9P2D7 4330 aa3.94□□□□□ -1.78
LRRC28-201ENST00000301981 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
LRRC28-201ENST00000301981 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
LRRC28-201ENST00000301981 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
LRRC28-201ENST00000301981 DNAH8Q96JB1 4490 aa3.92□□□□□ -1.78
LRRC28-201ENST00000301981 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
LRRC28-201ENST00000301981 TPRXLQ17RH7 258 aa3.91□□□□□ -1.78
LRRC28-201ENST00000301981 DNAH11Q96DT5 4516 aa3.9□□□□□ -1.78
LRRC28-201ENST00000301981 CMYA5Q8N3K9 4069 aa3.9□□□□□ -1.78
LRRC28-201ENST00000301981 STARD9Q9P2P6 4700 aa3.88□□□□□ -1.79
LRRC28-201ENST00000301981 PRKDCP78527 4128 aaKnown RBP3.81□□□□□ -1.8
LRRC28-201ENST00000301981 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
LRRC28-201ENST00000301981 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms