RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 LINC01558Q9Y6Z2 57 aa12.42□□□□□ -0.42
LTBP3-201ENST00000301873 Q75L30 129 aa12.42□□□□□ -0.42
LTBP3-201ENST00000301873 SPINK7P58062 85 aa12.37□□□□□ -0.43
LTBP3-201ENST00000301873 Q5VV11 94 aa12.35□□□□□ -0.43
LTBP3-201ENST00000301873 MXRA5Q9NR99 2828 aa12.3□□□□□ -0.44
LTBP3-201ENST00000301873 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
LTBP3-201ENST00000301873 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
LTBP3-201ENST00000301873 PKD1L1Q8TDX9 2849 aa12.27□□□□□ -0.45
LTBP3-201ENST00000301873 KRTAP29-1A8MX34 341 aaPredicted RBP12.26□□□□□ -0.45
LTBP3-201ENST00000301873 Q6ZR54 194 aa12.25□□□□□ -0.45
LTBP3-201ENST00000301873 A0A087X002 238 aa12.25□□□□□ -0.45
LTBP3-201ENST00000301873 SVEP1Q4LDE5 3571 aa12.25□□□□□ -0.45
LTBP3-201ENST00000301873 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
LTBP3-201ENST00000301873 SPENQ96T58 3664 aaKnown RBP12.24□□□□□ -0.45
LTBP3-201ENST00000301873 PRAC1Q96KF2 57 aa12.23□□□□□ -0.45
LTBP3-201ENST00000301873 NOTCH2NLQ7Z3S9 236 aa12.22□□□□□ -0.45
LTBP3-201ENST00000301873 KRTAP7-1Q8IUC3 87 aa12.22□□□□□ -0.45
LTBP3-201ENST00000301873 CSAG1Q6PB30 78 aa12.18□□□□□ -0.46
LTBP3-201ENST00000301873 CAMK2N1Q7Z7J9 78 aa12.17□□□□□ -0.46
LTBP3-201ENST00000301873 CELSR1Q9NYQ6 3014 aa12.15□□□□□ -0.46
LTBP3-201ENST00000301873 LCE6AA0A183 80 aa12.15□□□□□ -0.46
LTBP3-201ENST00000301873 Q5VSD8 79 aa12.13□□□□□ -0.47
LTBP3-201ENST00000301873 Q6ZRN7 208 aaPredicted RBP12.1□□□□□ -0.47
LTBP3-201ENST00000301873 DMAC1Q96GE9 116 aa12.1□□□□□ -0.47
LTBP3-201ENST00000301873 S4R3F8 94 aa12.08□□□□□ -0.47
LTBP3-201ENST00000301873 M0R2T5 61 aa12.06□□□□□ -0.48
LTBP3-201ENST00000301873 R4GN34 69 aa11.98□□□□□ -0.49
LTBP3-201ENST00000301873 VWFP04275 2813 aa11.97□□□□□ -0.49
LTBP3-201ENST00000301873 TENM2Q9NT68 2774 aa11.96□□□□□ -0.5
LTBP3-201ENST00000301873 PDZD2O15018 2839 aa11.95□□□□□ -0.5
LTBP3-201ENST00000301873 LUZP6Q538Z0 58 aa11.92□□□□□ -0.5
LTBP3-201ENST00000301873 FBN1P35555 2871 aaKnown RBP11.9□□□□□ -0.5
LTBP3-201ENST00000301873 SEC61BP60468 96 aaKnown RBP11.89□□□□□ -0.51
LTBP3-201ENST00000301873 RPL37P61927 97 aaKnown RBP11.89□□□□□ -0.51
LTBP3-201ENST00000301873 KRTAP13-1Q8IUC0 172 aa11.88□□□□□ -0.51
LTBP3-201ENST00000301873 SRRM2Q9UQ35 2752 aaKnown RBP11.87□□□□□ -0.51
LTBP3-201ENST00000301873 KRTAP13-2Q52LG2 175 aa11.86□□□□□ -0.51
LTBP3-201ENST00000301873 SPATA8Q6RVD6 105 aa11.85□□□□□ -0.51
LTBP3-201ENST00000301873 CUBNO60494 3623 aa11.85□□□□□ -0.51
LTBP3-201ENST00000301873 TGP01266 2768 aa11.84□□□□□ -0.51
LTBP3-201ENST00000301873 BSNQ9UPA5 3926 aa11.84□□□□□ -0.51
LTBP3-201ENST00000301873 H1FX-AS1Q4G0G2 97 aa11.82□□□□□ -0.52
LTBP3-201ENST00000301873 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
LTBP3-201ENST00000301873 M0QZ58 72 aa11.76□□□□□ -0.53
LTBP3-201ENST00000301873 ROMO1P60602 79 aa11.68□□□□□ -0.54
LTBP3-201ENST00000301873 ADM2Q7Z4H4 148 aa11.68□□□□□ -0.54
LTBP3-201ENST00000301873 A8MU10 97 aa11.66□□□□□ -0.54
LTBP3-201ENST00000301873 RPS29P62273 56 aaKnown RBP11.59□□□□□ -0.55
LTBP3-201ENST00000301873 OTOGQ6ZRI0 2925 aa11.53□□□□□ -0.56
LTBP3-201ENST00000301873 H3BS24 57 aa11.49□□□□□ -0.57
LTBP3-201ENST00000301873 A6NN06 94 aa11.46□□□□□ -0.58
LTBP3-201ENST00000301873 ZFHX3Q15911 3703 aa11.43□□□□□ -0.58
LTBP3-201ENST00000301873 CSMD2Q7Z408 3487 aa11.37□□□□□ -0.59
LTBP3-201ENST00000301873 A8MUU9 505 aa11.36□□□□□ -0.59
LTBP3-201ENST00000301873 VPS13CQ709C8 3753 aa11.35□□□□□ -0.59
LTBP3-201ENST00000301873 KRTAP1-4P0C5Y4 121 aa11.34□□□□□ -0.59
LTBP3-201ENST00000301873 C20orf166-AS1Q96NR2 134 aa11.27□□□□□ -0.6
LTBP3-201ENST00000301873 PLAC4Q8WY50 150 aa11.25□□□□□ -0.61
LTBP3-201ENST00000301873 KRTAP25-1Q3LHN0 102 aa11.24□□□□□ -0.61
LTBP3-201ENST00000301873 A0A0A0MQY5 61 aa11.21□□□□□ -0.61
LTBP3-201ENST00000301873 FBN3Q75N90 2809 aa11.21□□□□□ -0.62
LTBP3-201ENST00000301873 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
LTBP3-201ENST00000301873 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.63
LTBP3-201ENST00000301873 COL7A1Q02388 2944 aa11.1□□□□□ -0.63
LTBP3-201ENST00000301873 XP32Q5T750 250 aa11.05□□□□□ -0.64
LTBP3-201ENST00000301873 KRTAP16-1A8MUX0 517 aa10.99□□□□□ -0.65
LTBP3-201ENST00000301873 MEGF8Q7Z7M0 2845 aa10.93□□□□□ -0.66
LTBP3-201ENST00000301873 NDUFAF8A1L188 74 aa10.9□□□□□ -0.66
LTBP3-201ENST00000301873 H0YAA0 97 aa10.88□□□□□ -0.67
LTBP3-201ENST00000301873 C10orf95Q9H7T3 257 aa10.85□□□□□ -0.67
LTBP3-201ENST00000301873 TNP1P09430 55 aa10.81□□□□□ -0.68
LTBP3-201ENST00000301873 ANK3Q12955 4377 aaKnown RBP10.78□□□□□ -0.68
LTBP3-201ENST00000301873 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
LTBP3-201ENST00000301873 ZNF469Q96JG9 3925 aaPredicted RBP10.76□□□□□ -0.69
LTBP3-201ENST00000301873 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
LTBP3-201ENST00000301873 P0C880 135 aa10.74□□□□□ -0.69
LTBP3-201ENST00000301873 AKAP9Q99996 3911 aa10.74□□□□□ -0.69
LTBP3-201ENST00000301873 TPRXLQ17RH7 258 aa10.71□□□□□ -0.69
LTBP3-201ENST00000301873 KRTAP13-3Q3SY46 172 aa10.7□□□□□ -0.7
LTBP3-201ENST00000301873 KRTAP10-8P60410 259 aa10.62□□□□□ -0.71
LTBP3-201ENST00000301873 PP632Q6XCG6 107 aa10.44□□□□□ -0.74
LTBP3-201ENST00000301873 KRTAP10-10P60014 251 aa10.42□□□□□ -0.74
LTBP3-201ENST00000301873 KRTAP3-1Q9BYR8 98 aa10.28□□□□□ -0.76
LTBP3-201ENST00000301873 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
LTBP3-201ENST00000301873 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
LTBP3-201ENST00000301873 KRTAP12-1P59990 96 aa10.07□□□□□ -0.8
LTBP3-201ENST00000301873 PRO2289Q9P1D8 64 aa9.99□□□□□ -0.81
LTBP3-201ENST00000301873 HUWE1Q7Z6Z7 4374 aaKnown RBP9.99□□□□□ -0.81
LTBP3-201ENST00000301873 KRTAP13-4Q3LI77 160 aa9.96□□□□□ -0.82
LTBP3-201ENST00000301873 KRTAP10-6P60371 365 aaPredicted RBP9.94□□□□□ -0.82
LTBP3-201ENST00000301873 DNAH10Q8IVF4 4471 aa9.92□□□□□ -0.82
LTBP3-201ENST00000301873 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
LTBP3-201ENST00000301873 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
LTBP3-201ENST00000301873 ANK2Q01484 3957 aa9.63□□□□□ -0.87
LTBP3-201ENST00000301873 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
LTBP3-201ENST00000301873 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
LTBP3-201ENST00000301873 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
LTBP3-201ENST00000301873 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
LTBP3-201ENST00000301873 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
LTBP3-201ENST00000301873 DNHD1Q96M86 4753 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms