RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 MRPL34Q9BQ48 92 aaKnown RBP6.52□□□□□ -1.37
ZNF558-201ENST00000301475 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
ZNF558-201ENST00000301475 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
ZNF558-201ENST00000301475 LINC00313P59037 77 aa6.49□□□□□ -1.37
ZNF558-201ENST00000301475 Q5W150 140 aa6.49□□□□□ -1.37
ZNF558-201ENST00000301475 FBN3Q75N90 2809 aa6.47□□□□□ -1.37
ZNF558-201ENST00000301475 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
ZNF558-201ENST00000301475 PLECQ15149 4684 aaKnown RBP6.46□□□□□ -1.37
ZNF558-201ENST00000301475 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
ZNF558-201ENST00000301475 CDK2AP2O75956 126 aa6.45□□□□□ -1.38
ZNF558-201ENST00000301475 C14orf177Q52M58 125 aa6.45□□□□□ -1.38
ZNF558-201ENST00000301475 LINC00483Q53H64 154 aa6.45□□□□□ -1.38
ZNF558-201ENST00000301475 WWC2-AS2Q96NR7 200 aa6.45□□□□□ -1.38
ZNF558-201ENST00000301475 ANAPC11Q9NYG5 84 aa6.44□□□□□ -1.38
ZNF558-201ENST00000301475 C8orf87E5RJ46 101 aa6.44□□□□□ -1.38
ZNF558-201ENST00000301475 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
ZNF558-201ENST00000301475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.42□□□□□ -1.38
ZNF558-201ENST00000301475 UBE2DNLQ8IWF7 75 aa6.42□□□□□ -1.38
ZNF558-201ENST00000301475 HECTD4Q9Y4D8 3996 aa6.41□□□□□ -1.38
ZNF558-201ENST00000301475 STARD9Q9P2P6 4700 aa6.41□□□□□ -1.38
ZNF558-201ENST00000301475 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.38
ZNF558-201ENST00000301475 ACYP2P14621 99 aa6.4□□□□□ -1.39
ZNF558-201ENST00000301475 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
ZNF558-201ENST00000301475 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
ZNF558-201ENST00000301475 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
ZNF558-201ENST00000301475 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
ZNF558-201ENST00000301475 APLNQ9ULZ1 77 aa6.36□□□□□ -1.39
ZNF558-201ENST00000301475 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
ZNF558-201ENST00000301475 ZNF706Q9Y5V0 76 aaPredicted RBP6.36□□□□□ -1.39
ZNF558-201ENST00000301475 RTL8CO15255 209 aa6.35□□□□□ -1.39
ZNF558-201ENST00000301475 A0A1B0GU69 56 aa6.35□□□□□ -1.39
ZNF558-201ENST00000301475 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
ZNF558-201ENST00000301475 KMT2AQ03164 3969 aa6.34□□□□□ -1.39
ZNF558-201ENST00000301475 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
ZNF558-201ENST00000301475 IGLV5-52A0A0A0MRZ9 124 aa6.32□□□□□ -1.4
ZNF558-201ENST00000301475 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
ZNF558-201ENST00000301475 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
ZNF558-201ENST00000301475 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
ZNF558-201ENST00000301475 NBDYA0A0U1RRE5 68 aa6.31□□□□□ -1.4
ZNF558-201ENST00000301475 DNAH2Q9P225 4427 aa6.31□□□□□ -1.4
ZNF558-201ENST00000301475 ZNF861PO60384 105 aa6.3□□□□□ -1.4
ZNF558-201ENST00000301475 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
ZNF558-201ENST00000301475 CIRBP-AS1Q8TBR5 109 aa6.28□□□□□ -1.4
ZNF558-201ENST00000301475 NUPR2A6NF83 97 aa6.28□□□□□ -1.4
ZNF558-201ENST00000301475 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
ZNF558-201ENST00000301475 UQCR11O14957 56 aa6.26□□□□□ -1.41
ZNF558-201ENST00000301475 FAM229AH3BQW9 127 aa6.26□□□□□ -1.41
ZNF558-201ENST00000301475 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
ZNF558-201ENST00000301475 A0A087WTM6 91 aa6.23□□□□□ -1.41
ZNF558-201ENST00000301475 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
ZNF558-201ENST00000301475 LY6G6CO95867 125 aa6.2□□□□□ -1.42
ZNF558-201ENST00000301475 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
ZNF558-201ENST00000301475 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
ZNF558-201ENST00000301475 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
ZNF558-201ENST00000301475 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
ZNF558-201ENST00000301475 H3BS24 57 aa6.17□□□□□ -1.42
ZNF558-201ENST00000301475 SSBP3-AS1Q7Z2R9 100 aa6.16□□□□□ -1.42
ZNF558-201ENST00000301475 DNAH5Q8TE73 4624 aa6.15□□□□□ -1.42
ZNF558-201ENST00000301475 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
ZNF558-201ENST00000301475 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
ZNF558-201ENST00000301475 SPINK1P00995 79 aa6.12□□□□□ -1.43
ZNF558-201ENST00000301475 LRP1BQ9NZR2 4599 aa6.12□□□□□ -1.43
ZNF558-201ENST00000301475 KRTAP21-3Q3LHN1 58 aa6.09□□□□□ -1.43
ZNF558-201ENST00000301475 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.44
ZNF558-201ENST00000301475 Q8N1X5 172 aa6.08□□□□□ -1.44
ZNF558-201ENST00000301475 H0YAA0 97 aa6.06□□□□□ -1.44
ZNF558-201ENST00000301475 Q6ZSA8 131 aa6.05□□□□□ -1.44
ZNF558-201ENST00000301475 A8MUU9 505 aa6.04□□□□□ -1.44
ZNF558-201ENST00000301475 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
ZNF558-201ENST00000301475 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
ZNF558-201ENST00000301475 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
ZNF558-201ENST00000301475 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
ZNF558-201ENST00000301475 KRTAP10-2P60368 255 aa6□□□□□ -1.45
ZNF558-201ENST00000301475 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
ZNF558-201ENST00000301475 SACSQ9NZJ4 4579 aa6□□□□□ -1.45
ZNF558-201ENST00000301475 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
ZNF558-201ENST00000301475 KMT2CQ8NEZ4 4911 aaKnown RBP5.99□□□□□ -1.45
ZNF558-201ENST00000301475 KRTAP1-4P0C5Y4 121 aa5.99□□□□□ -1.45
ZNF558-201ENST00000301475 FAT2Q9NYQ8 4349 aa5.98□□□□□ -1.45
ZNF558-201ENST00000301475 PKD1P98161 4303 aa5.96□□□□□ -1.46
ZNF558-201ENST00000301475 ROMO1P60602 79 aa5.93□□□□□ -1.46
ZNF558-201ENST00000301475 A0A1B0GU33 70 aa5.93□□□□□ -1.46
ZNF558-201ENST00000301475 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
ZNF558-201ENST00000301475 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
ZNF558-201ENST00000301475 CRIPTQ9P021 101 aa5.9□□□□□ -1.47
ZNF558-201ENST00000301475 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
ZNF558-201ENST00000301475 J3QL48 77 aa5.88□□□□□ -1.47
ZNF558-201ENST00000301475 FAT1Q14517 4588 aa5.85□□□□□ -1.47
ZNF558-201ENST00000301475 RYR2Q92736 4967 aa5.81□□□□□ -1.48
ZNF558-201ENST00000301475 C9orf92A6NGG3 77 aa5.81□□□□□ -1.48
ZNF558-201ENST00000301475 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
ZNF558-201ENST00000301475 P0C880 135 aa5.81□□□□□ -1.48
ZNF558-201ENST00000301475 COX6B2Q6YFQ2 88 aa5.81□□□□□ -1.48
ZNF558-201ENST00000301475 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
ZNF558-201ENST00000301475 RYR3Q15413 4870 aa5.79□□□□□ -1.48
ZNF558-201ENST00000301475 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
ZNF558-201ENST00000301475 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
ZNF558-201ENST00000301475 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
ZNF558-201ENST00000301475 K7ERS5 55 aa5.76□□□□□ -1.49
ZNF558-201ENST00000301475 RPS29P62273 56 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 324.8 ms