RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 PLAC8Q9NZF1 115 aa6.91□□□□□ -1.3
EPB42-201ENST00000300215 M0R2T5 61 aa6.91□□□□□ -1.3
EPB42-201ENST00000300215 Q5VV11 94 aa6.91□□□□□ -1.3
EPB42-201ENST00000300215 CSAG1Q6PB30 78 aa6.89□□□□□ -1.31
EPB42-201ENST00000300215 SPRR1BP22528 89 aa6.88□□□□□ -1.31
EPB42-201ENST00000300215 OXTP01178 125 aa6.86□□□□□ -1.31
EPB42-201ENST00000300215 SVEP1Q4LDE5 3571 aa6.86□□□□□ -1.31
EPB42-201ENST00000300215 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
EPB42-201ENST00000300215 R4GN34 69 aa6.83□□□□□ -1.32
EPB42-201ENST00000300215 H3BS24 57 aa6.83□□□□□ -1.32
EPB42-201ENST00000300215 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
EPB42-201ENST00000300215 S4R3F8 94 aa6.81□□□□□ -1.32
EPB42-201ENST00000300215 CUBNO60494 3623 aa6.8□□□□□ -1.32
EPB42-201ENST00000300215 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
EPB42-201ENST00000300215 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
EPB42-201ENST00000300215 PANO1I0J062 215 aa6.76□□□□□ -1.33
EPB42-201ENST00000300215 KRTAP10-1P60331 282 aa6.75□□□□□ -1.33
EPB42-201ENST00000300215 KRTAP10-2P60368 255 aa6.75□□□□□ -1.33
EPB42-201ENST00000300215 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
EPB42-201ENST00000300215 OTOGQ6ZRI0 2925 aa6.73□□□□□ -1.33
EPB42-201ENST00000300215 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
EPB42-201ENST00000300215 VWFP04275 2813 aa6.71□□□□□ -1.34
EPB42-201ENST00000300215 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.34
EPB42-201ENST00000300215 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
EPB42-201ENST00000300215 NBPF19A0A087WUL8 3843 aa6.68□□□□□ -1.34
EPB42-201ENST00000300215 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
EPB42-201ENST00000300215 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
EPB42-201ENST00000300215 PDZD2O15018 2839 aa6.68□□□□□ -1.34
EPB42-201ENST00000300215 M0QZ58 72 aa6.68□□□□□ -1.34
EPB42-201ENST00000300215 Q5VSD8 79 aa6.68□□□□□ -1.34
EPB42-201ENST00000300215 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
EPB42-201ENST00000300215 CSMD2Q7Z408 3487 aa6.67□□□□□ -1.34
EPB42-201ENST00000300215 A0A087X002 238 aa6.67□□□□□ -1.34
EPB42-201ENST00000300215 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
EPB42-201ENST00000300215 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
EPB42-201ENST00000300215 ROMO1P60602 79 aa6.66□□□□□ -1.34
EPB42-201ENST00000300215 Q6ZR54 194 aa6.66□□□□□ -1.34
EPB42-201ENST00000300215 ZFHX3Q15911 3703 aa6.65□□□□□ -1.35
EPB42-201ENST00000300215 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
EPB42-201ENST00000300215 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
EPB42-201ENST00000300215 LCE6AA0A183 80 aa6.58□□□□□ -1.36
EPB42-201ENST00000300215 KRTAP11-1Q8IUC1 163 aa6.58□□□□□ -1.36
EPB42-201ENST00000300215 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
EPB42-201ENST00000300215 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
EPB42-201ENST00000300215 BSNQ9UPA5 3926 aa6.56□□□□□ -1.36
EPB42-201ENST00000300215 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
EPB42-201ENST00000300215 TENM2Q9NT68 2774 aa6.53□□□□□ -1.36
EPB42-201ENST00000300215 A8MU10 97 aa6.51□□□□□ -1.37
EPB42-201ENST00000300215 Q6ZRN7 208 aaPredicted RBP6.47□□□□□ -1.37
EPB42-201ENST00000300215 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
EPB42-201ENST00000300215 TGP01266 2768 aa6.45□□□□□ -1.38
EPB42-201ENST00000300215 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
EPB42-201ENST00000300215 A6NN06 94 aa6.43□□□□□ -1.38
EPB42-201ENST00000300215 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
EPB42-201ENST00000300215 A8MUU9 505 aa6.38□□□□□ -1.39
EPB42-201ENST00000300215 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
EPB42-201ENST00000300215 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
EPB42-201ENST00000300215 KRTAP13-1Q8IUC0 172 aa6.35□□□□□ -1.39
EPB42-201ENST00000300215 TRRAPQ9Y4A5 3859 aa6.34□□□□□ -1.39
EPB42-201ENST00000300215 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
EPB42-201ENST00000300215 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
EPB42-201ENST00000300215 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
EPB42-201ENST00000300215 VPS13CQ709C8 3753 aa6.27□□□□□ -1.41
EPB42-201ENST00000300215 ANK3Q12955 4377 aaKnown RBP6.26□□□□□ -1.41
EPB42-201ENST00000300215 TNP1P09430 55 aa6.16□□□□□ -1.42
EPB42-201ENST00000300215 ZNF469Q96JG9 3925 aaPredicted RBP6.14□□□□□ -1.43
EPB42-201ENST00000300215 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
EPB42-201ENST00000300215 FBN3Q75N90 2809 aa6.14□□□□□ -1.43
EPB42-201ENST00000300215 KRTAP21-3Q3LHN1 58 aa6.09□□□□□ -1.43
EPB42-201ENST00000300215 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
EPB42-201ENST00000300215 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
EPB42-201ENST00000300215 H0YAA0 97 aa6.02□□□□□ -1.45
EPB42-201ENST00000300215 XP32Q5T750 250 aa6.02□□□□□ -1.45
EPB42-201ENST00000300215 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
EPB42-201ENST00000300215 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
EPB42-201ENST00000300215 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
EPB42-201ENST00000300215 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
EPB42-201ENST00000300215 P0C880 135 aa5.94□□□□□ -1.46
EPB42-201ENST00000300215 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
EPB42-201ENST00000300215 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.48
EPB42-201ENST00000300215 AKAP9Q99996 3911 aa5.82□□□□□ -1.48
EPB42-201ENST00000300215 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
EPB42-201ENST00000300215 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
EPB42-201ENST00000300215 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
EPB42-201ENST00000300215 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
EPB42-201ENST00000300215 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
EPB42-201ENST00000300215 DNAH9Q9NYC9 4486 aa5.58□□□□□ -1.52
EPB42-201ENST00000300215 DNHD1Q96M86 4753 aa5.56□□□□□ -1.52
EPB42-201ENST00000300215 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
EPB42-201ENST00000300215 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
EPB42-201ENST00000300215 PLECQ15149 4684 aaKnown RBP5.51□□□□□ -1.53
EPB42-201ENST00000300215 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
EPB42-201ENST00000300215 DNAH10Q8IVF4 4471 aa5.45□□□□□ -1.54
EPB42-201ENST00000300215 DNAH11Q96DT5 4516 aa5.42□□□□□ -1.54
EPB42-201ENST00000300215 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.54
EPB42-201ENST00000300215 KRTAP10-4P60372 401 aaPredicted RBP5.38□□□□□ -1.55
EPB42-201ENST00000300215 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
EPB42-201ENST00000300215 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
EPB42-201ENST00000300215 STARD9Q9P2P6 4700 aa5.35□□□□□ -1.55
EPB42-201ENST00000300215 PRKDCP78527 4128 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms