RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 Q5VV11 94 aa8.05□□□□□ -1.12
CASC4-201ENST00000299957 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
CASC4-201ENST00000299957 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
CASC4-201ENST00000299957 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
CASC4-201ENST00000299957 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
CASC4-201ENST00000299957 HRES1P13985 223 aa7.99□□□□□ -1.13
CASC4-201ENST00000299957 SPINK7P58062 85 aa7.99□□□□□ -1.13
CASC4-201ENST00000299957 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
CASC4-201ENST00000299957 WWC2-AS2Q96NR7 200 aa7.98□□□□□ -1.13
CASC4-201ENST00000299957 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.14
CASC4-201ENST00000299957 PRAC1Q96KF2 57 aa7.95□□□□□ -1.14
CASC4-201ENST00000299957 SPRR1BP22528 89 aa7.95□□□□□ -1.14
CASC4-201ENST00000299957 AKAP9Q99996 3911 aa7.94□□□□□ -1.14
CASC4-201ENST00000299957 ANK3Q12955 4377 aaKnown RBP7.93□□□□□ -1.14
CASC4-201ENST00000299957 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
CASC4-201ENST00000299957 C8orf87E5RJ46 101 aa7.92□□□□□ -1.14
CASC4-201ENST00000299957 K7ERS5 55 aa7.92□□□□□ -1.14
CASC4-201ENST00000299957 Q5W150 140 aa7.92□□□□□ -1.14
CASC4-201ENST00000299957 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
CASC4-201ENST00000299957 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
CASC4-201ENST00000299957 CDC42SE1Q9NRR8 79 aa7.91□□□□□ -1.14
CASC4-201ENST00000299957 UQCR11O14957 56 aa7.9□□□□□ -1.14
CASC4-201ENST00000299957 LCA10Q71F78 164 aa7.88□□□□□ -1.15
CASC4-201ENST00000299957 Q75L30 129 aa7.86□□□□□ -1.15
CASC4-201ENST00000299957 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
CASC4-201ENST00000299957 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
CASC4-201ENST00000299957 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
CASC4-201ENST00000299957 LINC01558Q9Y6Z2 57 aa7.83□□□□□ -1.16
CASC4-201ENST00000299957 LCE6AA0A183 80 aa7.82□□□□□ -1.16
CASC4-201ENST00000299957 Q6ZRN7 208 aaPredicted RBP7.81□□□□□ -1.16
CASC4-201ENST00000299957 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
CASC4-201ENST00000299957 MEGF8Q7Z7M0 2845 aa7.77□□□□□ -1.16
CASC4-201ENST00000299957 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
CASC4-201ENST00000299957 A0A0D9SG42 100 aa7.76□□□□□ -1.17
CASC4-201ENST00000299957 Q6ZR54 194 aa7.73□□□□□ -1.17
CASC4-201ENST00000299957 KRTAP13-1Q8IUC0 172 aa7.73□□□□□ -1.17
CASC4-201ENST00000299957 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
CASC4-201ENST00000299957 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
CASC4-201ENST00000299957 KRTAP13-2Q52LG2 175 aa7.63□□□□□ -1.19
CASC4-201ENST00000299957 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
CASC4-201ENST00000299957 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
CASC4-201ENST00000299957 A0A1B0GU33 70 aa7.58□□□□□ -1.2
CASC4-201ENST00000299957 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
CASC4-201ENST00000299957 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
CASC4-201ENST00000299957 A6NN06 94 aa7.55□□□□□ -1.2
CASC4-201ENST00000299957 SPINT4Q6UDR6 99 aa7.54□□□□□ -1.2
CASC4-201ENST00000299957 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.23
CASC4-201ENST00000299957 H3BS24 57 aa7.39□□□□□ -1.23
CASC4-201ENST00000299957 DNAH10Q8IVF4 4471 aa7.36□□□□□ -1.23
CASC4-201ENST00000299957 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
CASC4-201ENST00000299957 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
CASC4-201ENST00000299957 HUWE1Q7Z6Z7 4374 aaKnown RBP7.29□□□□□ -1.24
CASC4-201ENST00000299957 Q5VSD8 79 aa7.26□□□□□ -1.25
CASC4-201ENST00000299957 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
CASC4-201ENST00000299957 Q6ZSA8 131 aa7.25□□□□□ -1.25
CASC4-201ENST00000299957 S4R3F8 94 aa7.24□□□□□ -1.25
CASC4-201ENST00000299957 ANK2Q01484 3957 aa7.23□□□□□ -1.25
CASC4-201ENST00000299957 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
CASC4-201ENST00000299957 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
CASC4-201ENST00000299957 J3QL48 77 aa7.21□□□□□ -1.26
CASC4-201ENST00000299957 RPL37P61927 97 aaKnown RBP7.2□□□□□ -1.26
CASC4-201ENST00000299957 H0YAA0 97 aa7.15□□□□□ -1.26
CASC4-201ENST00000299957 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
CASC4-201ENST00000299957 LYSTQ99698 3801 aa7.13□□□□□ -1.27
CASC4-201ENST00000299957 ROMO1P60602 79 aa7.12□□□□□ -1.27
CASC4-201ENST00000299957 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
CASC4-201ENST00000299957 A8MUU9 505 aa7.08□□□□□ -1.28
CASC4-201ENST00000299957 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
CASC4-201ENST00000299957 R4GN34 69 aa7.07□□□□□ -1.28
CASC4-201ENST00000299957 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
CASC4-201ENST00000299957 M0QZ58 72 aa7.04□□□□□ -1.28
CASC4-201ENST00000299957 DNAH11Q96DT5 4516 aa7.04□□□□□ -1.28
CASC4-201ENST00000299957 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
CASC4-201ENST00000299957 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
CASC4-201ENST00000299957 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
CASC4-201ENST00000299957 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
CASC4-201ENST00000299957 DNAH1Q9P2D7 4330 aa6.95□□□□□ -1.3
CASC4-201ENST00000299957 P0C880 135 aa6.95□□□□□ -1.3
CASC4-201ENST00000299957 STARD9Q9P2P6 4700 aa6.93□□□□□ -1.3
CASC4-201ENST00000299957 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
CASC4-201ENST00000299957 DNAH8Q96JB1 4490 aa6.92□□□□□ -1.3
CASC4-201ENST00000299957 KMT2AQ03164 3969 aa6.92□□□□□ -1.3
CASC4-201ENST00000299957 XP32Q5T750 250 aa6.91□□□□□ -1.3
CASC4-201ENST00000299957 PRKDCP78527 4128 aaKnown RBP6.89□□□□□ -1.31
CASC4-201ENST00000299957 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
CASC4-201ENST00000299957 FAT1Q14517 4588 aa6.86□□□□□ -1.31
CASC4-201ENST00000299957 FRAS1Q86XX4 4008 aa6.85□□□□□ -1.31
CASC4-201ENST00000299957 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
CASC4-201ENST00000299957 M0R2T5 61 aa6.81□□□□□ -1.32
CASC4-201ENST00000299957 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
CASC4-201ENST00000299957 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
CASC4-201ENST00000299957 DNAH5Q8TE73 4624 aa6.8□□□□□ -1.32
CASC4-201ENST00000299957 MYCBP2O75592 4640 aa6.79□□□□□ -1.32
CASC4-201ENST00000299957 LUZP6Q538Z0 58 aa6.77□□□□□ -1.33
CASC4-201ENST00000299957 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
CASC4-201ENST00000299957 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
CASC4-201ENST00000299957 A0A1B0GVY2 172 aa6.7□□□□□ -1.34
CASC4-201ENST00000299957 CMYA5Q8N3K9 4069 aa6.7□□□□□ -1.34
CASC4-201ENST00000299957 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
CASC4-201ENST00000299957 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms