RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
CDH8-201ENST00000299345 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
CDH8-201ENST00000299345 COA5Q86WW8 74 aa7.98□□□□□ -1.13
CDH8-201ENST00000299345 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
CDH8-201ENST00000299345 LINC00313P59037 77 aa7.97□□□□□ -1.13
CDH8-201ENST00000299345 LOC101927531A0A1B0GV80 90 aa7.96□□□□□ -1.14
CDH8-201ENST00000299345 A8MUN3 132 aa7.96□□□□□ -1.14
CDH8-201ENST00000299345 LIMD2Q9BT23 127 aa7.94□□□□□ -1.14
CDH8-201ENST00000299345 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
CDH8-201ENST00000299345 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
CDH8-201ENST00000299345 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
CDH8-201ENST00000299345 PLA2G1BP04054 148 aaKnown RBP7.92□□□□□ -1.14
CDH8-201ENST00000299345 C1orf195Q5TG92 126 aa7.91□□□□□ -1.14
CDH8-201ENST00000299345 Q6ZSA8 131 aa7.91□□□□□ -1.14
CDH8-201ENST00000299345 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
CDH8-201ENST00000299345 KRTAP13-2Q52LG2 175 aa7.9□□□□□ -1.14
CDH8-201ENST00000299345 DNAH17Q9UFH2 4485 aa7.9□□□□□ -1.14
CDH8-201ENST00000299345 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
CDH8-201ENST00000299345 Q5W150 140 aa7.89□□□□□ -1.15
CDH8-201ENST00000299345 Q8N9P0 234 aaPredicted RBP7.89□□□□□ -1.15
CDH8-201ENST00000299345 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
CDH8-201ENST00000299345 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
CDH8-201ENST00000299345 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
CDH8-201ENST00000299345 DNAH2Q9P225 4427 aa7.87□□□□□ -1.15
CDH8-201ENST00000299345 HECTD4Q9Y4D8 3996 aa7.86□□□□□ -1.15
CDH8-201ENST00000299345 DNAH8Q96JB1 4490 aa7.85□□□□□ -1.15
CDH8-201ENST00000299345 A6NED7 52 aa7.82□□□□□ -1.16
CDH8-201ENST00000299345 HRES1P13985 223 aa7.82□□□□□ -1.16
CDH8-201ENST00000299345 Q5VV11 94 aa7.81□□□□□ -1.16
CDH8-201ENST00000299345 ACYP2P14621 99 aa7.81□□□□□ -1.16
CDH8-201ENST00000299345 KRTAP1-4P0C5Y4 121 aa7.8□□□□□ -1.16
CDH8-201ENST00000299345 SPINK1P00995 79 aa7.8□□□□□ -1.16
CDH8-201ENST00000299345 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
CDH8-201ENST00000299345 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
CDH8-201ENST00000299345 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
CDH8-201ENST00000299345 FRAS1Q86XX4 4008 aa7.78□□□□□ -1.16
CDH8-201ENST00000299345 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
CDH8-201ENST00000299345 PRR26Q8N8Z3 221 aa7.77□□□□□ -1.17
CDH8-201ENST00000299345 LINC00304Q8N9R0 145 aa7.76□□□□□ -1.17
CDH8-201ENST00000299345 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
CDH8-201ENST00000299345 SPTSSBQ8NFR3 76 aa7.75□□□□□ -1.17
CDH8-201ENST00000299345 KRTAP21-3Q3LHN1 58 aa7.74□□□□□ -1.17
CDH8-201ENST00000299345 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
CDH8-201ENST00000299345 Q75L30 129 aa7.72□□□□□ -1.17
CDH8-201ENST00000299345 DNAH6Q9C0G6 4158 aa7.7□□□□□ -1.18
CDH8-201ENST00000299345 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CDH8-201ENST00000299345 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
CDH8-201ENST00000299345 DNAH5Q8TE73 4624 aa7.68□□□□□ -1.18
CDH8-201ENST00000299345 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
CDH8-201ENST00000299345 LRP1BQ9NZR2 4599 aa7.67□□□□□ -1.18
CDH8-201ENST00000299345 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
CDH8-201ENST00000299345 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
CDH8-201ENST00000299345 A8MU10 97 aa7.65□□□□□ -1.18
CDH8-201ENST00000299345 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
CDH8-201ENST00000299345 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
CDH8-201ENST00000299345 A0A1B0GU69 56 aa7.61□□□□□ -1.19
CDH8-201ENST00000299345 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
CDH8-201ENST00000299345 LCA10Q71F78 164 aa7.6□□□□□ -1.19
CDH8-201ENST00000299345 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
CDH8-201ENST00000299345 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
CDH8-201ENST00000299345 SPINK7P58062 85 aa7.58□□□□□ -1.2
CDH8-201ENST00000299345 HYDINQ4G0P3 5121 aa7.58□□□□□ -1.2
CDH8-201ENST00000299345 Q8N1X5 172 aa7.55□□□□□ -1.2
CDH8-201ENST00000299345 FLG2Q5D862 2391 aaPredicted RBP7.52□□□□□ -1.21
CDH8-201ENST00000299345 FAT2Q9NYQ8 4349 aa7.51□□□□□ -1.21
CDH8-201ENST00000299345 VPS13BQ7Z7G8 4022 aa7.51□□□□□ -1.21
CDH8-201ENST00000299345 PKD1P98161 4303 aa7.51□□□□□ -1.21
CDH8-201ENST00000299345 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
CDH8-201ENST00000299345 SEC61GP60059 68 aa7.5□□□□□ -1.21
CDH8-201ENST00000299345 UQCR11O14957 56 aa7.44□□□□□ -1.22
CDH8-201ENST00000299345 A8MUU9 505 aa7.42□□□□□ -1.22
CDH8-201ENST00000299345 C20orf166-AS1Q96NR2 134 aa7.42□□□□□ -1.22
CDH8-201ENST00000299345 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
CDH8-201ENST00000299345 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
CDH8-201ENST00000299345 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.22
CDH8-201ENST00000299345 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
CDH8-201ENST00000299345 KRTAP10-4P60372 401 aaPredicted RBP7.39□□□□□ -1.23
CDH8-201ENST00000299345 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
CDH8-201ENST00000299345 FAT1Q14517 4588 aa7.37□□□□□ -1.23
CDH8-201ENST00000299345 A6NN06 94 aa7.37□□□□□ -1.23
CDH8-201ENST00000299345 Q5VSD8 79 aa7.34□□□□□ -1.24
CDH8-201ENST00000299345 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
CDH8-201ENST00000299345 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
CDH8-201ENST00000299345 APOBP04114 4563 aaKnown RBP7.22□□□□□ -1.25
CDH8-201ENST00000299345 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
CDH8-201ENST00000299345 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
CDH8-201ENST00000299345 A0A1B0GU33 70 aa7.19□□□□□ -1.26
CDH8-201ENST00000299345 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
CDH8-201ENST00000299345 RYR2Q92736 4967 aa7.17□□□□□ -1.26
CDH8-201ENST00000299345 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.26
CDH8-201ENST00000299345 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
CDH8-201ENST00000299345 H1FX-AS1Q4G0G2 97 aa7.11□□□□□ -1.27
CDH8-201ENST00000299345 XP32Q5T750 250 aa7.11□□□□□ -1.27
CDH8-201ENST00000299345 KMT2CQ8NEZ4 4911 aaKnown RBP7.11□□□□□ -1.27
CDH8-201ENST00000299345 K7ERS5 55 aa7.09□□□□□ -1.27
CDH8-201ENST00000299345 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
CDH8-201ENST00000299345 H0YAA0 97 aa7.06□□□□□ -1.28
CDH8-201ENST00000299345 PKHD1L1Q86WI1 4243 aa7.05□□□□□ -1.28
CDH8-201ENST00000299345 LRP1Q07954 4544 aaKnown RBP7.05□□□□□ -1.28
CDH8-201ENST00000299345 S4R3F8 94 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms