RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 LINC01554Q52M75 96 aa12.23□□□□□ -0.45
HPS6-201ENST00000299238 HRES1P13985 223 aa12.21□□□□□ -0.45
HPS6-201ENST00000299238 KMT2AQ03164 3969 aa12.21□□□□□ -0.46
HPS6-201ENST00000299238 DNHD1Q96M86 4753 aa12.21□□□□□ -0.46
HPS6-201ENST00000299238 DNAH2Q9P225 4427 aa12.2□□□□□ -0.46
HPS6-201ENST00000299238 A8MWP4 228 aa12.19□□□□□ -0.46
HPS6-201ENST00000299238 LINC00472Q9H8W2 130 aa12.18□□□□□ -0.46
HPS6-201ENST00000299238 FRAS1Q86XX4 4008 aa12.18□□□□□ -0.46
HPS6-201ENST00000299238 Q6ZR54 194 aa12.17□□□□□ -0.46
HPS6-201ENST00000299238 RTL8CO15255 209 aa12.16□□□□□ -0.46
HPS6-201ENST00000299238 DNAH17Q9UFH2 4485 aa12.16□□□□□ -0.46
HPS6-201ENST00000299238 IGLV9-49A0A0B4J1Y8 123 aa12.15□□□□□ -0.46
HPS6-201ENST00000299238 MMP24-AS1A0A0U1RRL7 71 aa12.15□□□□□ -0.46
HPS6-201ENST00000299238 TGP01266 2768 aa12.14□□□□□ -0.47
HPS6-201ENST00000299238 PRR26Q8N8Z3 221 aa12.13□□□□□ -0.47
HPS6-201ENST00000299238 PLA2G1BP04054 148 aaKnown RBP12.1□□□□□ -0.47
HPS6-201ENST00000299238 FBN3Q75N90 2809 aa12.08□□□□□ -0.48
HPS6-201ENST00000299238 ANAPC11Q9NYG5 84 aa12.06□□□□□ -0.48
HPS6-201ENST00000299238 LINC00483Q53H64 154 aa12.06□□□□□ -0.48
HPS6-201ENST00000299238 DNAH8Q96JB1 4490 aa12.05□□□□□ -0.48
HPS6-201ENST00000299238 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
HPS6-201ENST00000299238 C1orf134Q5TEV5 83 aa12.04□□□□□ -0.48
HPS6-201ENST00000299238 IGLV5-52A0A0A0MRZ9 124 aa12.04□□□□□ -0.48
HPS6-201ENST00000299238 Q96NJ1 140 aa12.02□□□□□ -0.49
HPS6-201ENST00000299238 LY6G6CO95867 125 aa12□□□□□ -0.49
HPS6-201ENST00000299238 DNAH6Q9C0G6 4158 aa11.99□□□□□ -0.49
HPS6-201ENST00000299238 WWC2-AS2Q96NR7 200 aa11.98□□□□□ -0.49
HPS6-201ENST00000299238 ZNF706Q9Y5V0 76 aaPredicted RBP11.98□□□□□ -0.49
HPS6-201ENST00000299238 ZNF861PO60384 105 aa11.94□□□□□ -0.5
HPS6-201ENST00000299238 TP53AIP1Q9HCN2 124 aa11.93□□□□□ -0.5
HPS6-201ENST00000299238 ASB16-AS1Q495Z4 193 aa11.92□□□□□ -0.5
HPS6-201ENST00000299238 CSAG1Q6PB30 78 aa11.92□□□□□ -0.5
HPS6-201ENST00000299238 IGHV6-1A0A0B4J1U7 121 aa11.9□□□□□ -0.5
HPS6-201ENST00000299238 DNAH5Q8TE73 4624 aa11.89□□□□□ -0.51
HPS6-201ENST00000299238 RETNLBQ9BQ08 111 aa11.89□□□□□ -0.51
HPS6-201ENST00000299238 C8orf17Q9NRJ1 99 aa11.87□□□□□ -0.51
HPS6-201ENST00000299238 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
HPS6-201ENST00000299238 ALMS1Q8TCU4 4167 aa11.86□□□□□ -0.51
HPS6-201ENST00000299238 A0A087X002 238 aa11.84□□□□□ -0.51
HPS6-201ENST00000299238 IGLV7-43P04211 117 aa11.84□□□□□ -0.51
HPS6-201ENST00000299238 NOTCH2NLQ7Z3S9 236 aa11.84□□□□□ -0.51
HPS6-201ENST00000299238 KRTAP10-2P60368 255 aa11.84□□□□□ -0.51
HPS6-201ENST00000299238 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
HPS6-201ENST00000299238 SPATA8Q6RVD6 105 aa11.81□□□□□ -0.52
HPS6-201ENST00000299238 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
HPS6-201ENST00000299238 A0A1B0GU69 56 aa11.79□□□□□ -0.52
HPS6-201ENST00000299238 CIRBP-AS1Q8TBR5 109 aa11.78□□□□□ -0.52
HPS6-201ENST00000299238 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
HPS6-201ENST00000299238 Q5W150 140 aa11.76□□□□□ -0.53
HPS6-201ENST00000299238 HYDINQ4G0P3 5121 aa11.75□□□□□ -0.53
HPS6-201ENST00000299238 MIR22HGQ0VDD5 57 aa11.75□□□□□ -0.53
HPS6-201ENST00000299238 PKD1P98161 4303 aa11.75□□□□□ -0.53
HPS6-201ENST00000299238 MRPL34Q9BQ48 92 aaKnown RBP11.74□□□□□ -0.53
HPS6-201ENST00000299238 ACYP2P14621 99 aa11.73□□□□□ -0.53
HPS6-201ENST00000299238 FAT2Q9NYQ8 4349 aa11.72□□□□□ -0.53
HPS6-201ENST00000299238 KRTAP10-1P60331 282 aa11.68□□□□□ -0.54
HPS6-201ENST00000299238 Q6ZSA8 131 aa11.68□□□□□ -0.54
HPS6-201ENST00000299238 UQCR11O14957 56 aa11.65□□□□□ -0.54
HPS6-201ENST00000299238 LRP1BQ9NZR2 4599 aa11.65□□□□□ -0.55
HPS6-201ENST00000299238 SSBP3-AS1Q7Z2R9 100 aa11.62□□□□□ -0.55
HPS6-201ENST00000299238 KRTAP13-3Q3SY46 172 aa11.61□□□□□ -0.55
HPS6-201ENST00000299238 KRTAP21-3Q3LHN1 58 aa11.61□□□□□ -0.55
HPS6-201ENST00000299238 DMAC1Q96GE9 116 aa11.6□□□□□ -0.55
HPS6-201ENST00000299238 KRTAP13-2Q52LG2 175 aa11.55□□□□□ -0.56
HPS6-201ENST00000299238 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
HPS6-201ENST00000299238 ROMO1P60602 79 aa11.47□□□□□ -0.57
HPS6-201ENST00000299238 KRTAP1-4P0C5Y4 121 aa11.46□□□□□ -0.58
HPS6-201ENST00000299238 SACSQ9NZJ4 4579 aa11.46□□□□□ -0.58
HPS6-201ENST00000299238 PKHD1P08F94 4074 aa11.44□□□□□ -0.58
HPS6-201ENST00000299238 FLG2Q5D862 2391 aaPredicted RBP11.39□□□□□ -0.59
HPS6-201ENST00000299238 KRTAP25-1Q3LHN0 102 aa11.37□□□□□ -0.59
HPS6-201ENST00000299238 KRTAP16-1A8MUX0 517 aa11.34□□□□□ -0.59
HPS6-201ENST00000299238 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
HPS6-201ENST00000299238 TYMSOSQ8TAI1 123 aa11.29□□□□□ -0.6
HPS6-201ENST00000299238 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
HPS6-201ENST00000299238 IGKV2-30P06310 120 aa11.27□□□□□ -0.6
HPS6-201ENST00000299238 A8MUU9 505 aa11.26□□□□□ -0.61
HPS6-201ENST00000299238 P0C880 135 aa11.26□□□□□ -0.61
HPS6-201ENST00000299238 CRIPTQ9P021 101 aa11.26□□□□□ -0.61
HPS6-201ENST00000299238 SPINK1P00995 79 aa11.25□□□□□ -0.61
HPS6-201ENST00000299238 LINC00304Q8N9R0 145 aa11.25□□□□□ -0.61
HPS6-201ENST00000299238 IGKV2D-30A0A075B6S6 120 aa11.22□□□□□ -0.61
HPS6-201ENST00000299238 H0YAA0 97 aa11.2□□□□□ -0.62
HPS6-201ENST00000299238 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
HPS6-201ENST00000299238 A0A1B0GVY2 172 aa11.18□□□□□ -0.62
HPS6-201ENST00000299238 APOBP04114 4563 aaKnown RBP11.16□□□□□ -0.62
HPS6-201ENST00000299238 RYR2Q92736 4967 aa11.13□□□□□ -0.63
HPS6-201ENST00000299238 FAT1Q14517 4588 aa11.12□□□□□ -0.63
HPS6-201ENST00000299238 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
HPS6-201ENST00000299238 KRTAP10-4P60372 401 aaPredicted RBP11.06□□□□□ -0.64
HPS6-201ENST00000299238 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
HPS6-201ENST00000299238 Q8N1X5 172 aa11.05□□□□□ -0.64
HPS6-201ENST00000299238 KMT2CQ8NEZ4 4911 aaKnown RBP11□□□□□ -0.65
HPS6-201ENST00000299238 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
HPS6-201ENST00000299238 A0A1B0GU33 70 aa10.91□□□□□ -0.66
HPS6-201ENST00000299238 C20orf166-AS1Q96NR2 134 aa10.83□□□□□ -0.68
HPS6-201ENST00000299238 SPINT4Q6UDR6 99 aa10.82□□□□□ -0.68
HPS6-201ENST00000299238 NDUFAF8A1L188 74 aa10.82□□□□□ -0.68
HPS6-201ENST00000299238 H1FX-AS1Q4G0G2 97 aa10.82□□□□□ -0.68
HPS6-201ENST00000299238 HSPG2P98160 4391 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms