RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 H3BQ85 93 aa3.3□□□□□ -1.88
SSX3-201ENST00000298396 K7EP34 96 aa3.3□□□□□ -1.88
SSX3-201ENST00000298396 Q5XG85 94 aa3.3□□□□□ -1.88
SSX3-201ENST00000298396 Q6Q795 121 aa3.3□□□□□ -1.88
SSX3-201ENST00000298396 ANKRD29Q8N6D5 301 aa3.3□□□□□ -1.88
SSX3-201ENST00000298396 OBSCN-AS1Q96MR7 158 aa3.3□□□□□ -1.88
SSX3-201ENST00000298396 C1orf195Q5TG92 126 aa3.29□□□□□ -1.88
SSX3-201ENST00000298396 Q75L30 129 aa3.29□□□□□ -1.88
SSX3-201ENST00000298396 H3BT86 120 aa3.28□□□□□ -1.88
SSX3-201ENST00000298396 PRR4Q16378 134 aa3.28□□□□□ -1.88
SSX3-201ENST00000298396 TEN1Q86WV5 123 aa3.28□□□□□ -1.88
SSX3-201ENST00000298396 Q96NJ1 140 aa3.28□□□□□ -1.88
SSX3-201ENST00000298396 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
SSX3-201ENST00000298396 ASB16-AS1Q495Z4 193 aa3.27□□□□□ -1.89
SSX3-201ENST00000298396 Q6ZQT0 140 aa3.27□□□□□ -1.89
SSX3-201ENST00000298396 IGLV7-46A0A075B6I9 117 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 A0A087WSZ3 146 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 LOC110117498A0A087WWA1 95 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 CCKP06307 115 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 FP248Q71RG6 208 aaPredicted RBP3.26□□□□□ -1.89
SSX3-201ENST00000298396 LIMD2Q9BT23 127 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
SSX3-201ENST00000298396 A0A1B0GV90 55 aa3.25□□□□□ -1.89
SSX3-201ENST00000298396 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
SSX3-201ENST00000298396 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
SSX3-201ENST00000298396 DSCR8Q96T75 97 aa3.24□□□□□ -1.89
SSX3-201ENST00000298396 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
SSX3-201ENST00000298396 VPS25Q9BRG1 176 aa3.23□□□□□ -1.89
SSX3-201ENST00000298396 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
SSX3-201ENST00000298396 MUC2Q02817 5179 aa3.23□□□□□ -1.89
SSX3-201ENST00000298396 SS18L2Q9UHA2 77 aa3.22□□□□□ -1.89
SSX3-201ENST00000298396 C9orf92A6NGG3 77 aa3.21□□□□□ -1.9
SSX3-201ENST00000298396 F8W1H4 67 aa3.21□□□□□ -1.9
SSX3-201ENST00000298396 PDE6GP18545 87 aa3.21□□□□□ -1.9
SSX3-201ENST00000298396 DEFB116Q30KQ4 102 aa3.21□□□□□ -1.9
SSX3-201ENST00000298396 ETDBQ3ZM63 59 aa3.21□□□□□ -1.9
SSX3-201ENST00000298396 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
SSX3-201ENST00000298396 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
SSX3-201ENST00000298396 A0A1B0GW54 56 aa3.18□□□□□ -1.9
SSX3-201ENST00000298396 IGKV4-1P06312 121 aa3.18□□□□□ -1.9
SSX3-201ENST00000298396 SIGMAR1Q99720 223 aa3.18□□□□□ -1.9
SSX3-201ENST00000298396 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
SSX3-201ENST00000298396 KRTAP16-1A8MUX0 517 aa3.17□□□□□ -1.9
SSX3-201ENST00000298396 DSCR10P59022 87 aa3.17□□□□□ -1.9
SSX3-201ENST00000298396 LINC00846Q9NV44 126 aa3.17□□□□□ -1.9
SSX3-201ENST00000298396 MT3P25713 68 aa3.16□□□□□ -1.9
SSX3-201ENST00000298396 Q6ZVQ6 151 aa3.16□□□□□ -1.9
SSX3-201ENST00000298396 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
SSX3-201ENST00000298396 A0A1B0GVX0 72 aa3.15□□□□□ -1.91
SSX3-201ENST00000298396 NREPQ16612 68 aa3.15□□□□□ -1.91
SSX3-201ENST00000298396 IGHV6-1A0A0B4J1U7 121 aa3.14□□□□□ -1.91
SSX3-201ENST00000298396 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
SSX3-201ENST00000298396 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
SSX3-201ENST00000298396 A8MUU9 505 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 A8MWP4 228 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 J3KT08 172 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 K7EQZ3 153 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 C20orf166-AS1Q96NR2 134 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
SSX3-201ENST00000298396 MMP24-AS1A0A0U1RRL7 71 aa3.12□□□□□ -1.91
SSX3-201ENST00000298396 LINC00313P59037 77 aa3.12□□□□□ -1.91
SSX3-201ENST00000298396 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
SSX3-201ENST00000298396 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
SSX3-201ENST00000298396 Q8N9L7 120 aa3.12□□□□□ -1.91
SSX3-201ENST00000298396 C8orf17Q9NRJ1 99 aa3.12□□□□□ -1.91
SSX3-201ENST00000298396 FAM240AA0A1B0GVK7 77 aa3.11□□□□□ -1.91
SSX3-201ENST00000298396 C8orf87E5RJ46 101 aa3.11□□□□□ -1.91
SSX3-201ENST00000298396 BPY2O14599 106 aa3.11□□□□□ -1.91
SSX3-201ENST00000298396 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
SSX3-201ENST00000298396 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
SSX3-201ENST00000298396 NDUFB1O75438 58 aa3.08□□□□□ -1.92
SSX3-201ENST00000298396 ACYP1P07311 99 aa3.07□□□□□ -1.92
SSX3-201ENST00000298396 CXCL6P80162 114 aa3.07□□□□□ -1.92
SSX3-201ENST00000298396 TMEM254Q8TBM7 123 aa3.07□□□□□ -1.92
SSX3-201ENST00000298396 hDV103S1A0JD37 113 aa3.06□□□□□ -1.92
SSX3-201ENST00000298396 WFDC13Q8IUB5 93 aa3.06□□□□□ -1.92
SSX3-201ENST00000298396 ATP11AUNQ6ZP68 121 aa3.05□□□□□ -1.92
SSX3-201ENST00000298396 MRPL34Q9BQ48 92 aaKnown RBP3.05□□□□□ -1.92
SSX3-201ENST00000298396 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
SSX3-201ENST00000298396 ZCCHC13Q8WW36 166 aaKnown RBP3.04□□□□□ -1.92
SSX3-201ENST00000298396 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
SSX3-201ENST00000298396 ATP5EP2Q5VTU8 51 aa3.03□□□□□ -1.92
SSX3-201ENST00000298396 Q5W150 140 aa3.03□□□□□ -1.92
SSX3-201ENST00000298396 LINC00643Q86TS7 51 aa3.03□□□□□ -1.92
SSX3-201ENST00000298396 A0A087WVE0 104 aa3.02□□□□□ -1.93
SSX3-201ENST00000298396 HRES1P13985 223 aa3.02□□□□□ -1.93
SSX3-201ENST00000298396 J3QR89 54 aa3□□□□□ -1.93
SSX3-201ENST00000298396 NDUFS5O43920 106 aa3□□□□□ -1.93
SSX3-201ENST00000298396 K7ERU9 68 aa2.99□□□□□ -1.93
SSX3-201ENST00000298396 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
SSX3-201ENST00000298396 HIST1H4AP62805 103 aaKnown RBP2.99□□□□□ -1.93
SSX3-201ENST00000298396 SPINK7P58062 85 aa2.98□□□□□ -1.93
SSX3-201ENST00000298396 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
SSX3-201ENST00000298396 MT1HP80294 61 aa2.97□□□□□ -1.93
SSX3-201ENST00000298396 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SSX3-201ENST00000298396 A0A0U1RQV1 116 aa2.95□□□□□ -1.94
SSX3-201ENST00000298396 KRTAP10-6P60371 365 aaPredicted RBP2.95□□□□□ -1.94
SSX3-201ENST00000298396 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms