RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 FAT2Q9NYQ8 4349 aa5.55□□□□□ -1.52
PRDM9-201ENST00000296682 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
PRDM9-201ENST00000296682 FLG2Q5D862 2391 aaPredicted RBP5.54□□□□□ -1.52
PRDM9-201ENST00000296682 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
PRDM9-201ENST00000296682 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
PRDM9-201ENST00000296682 C8orf17Q9NRJ1 99 aa5.53□□□□□ -1.52
PRDM9-201ENST00000296682 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
PRDM9-201ENST00000296682 FAM229BQ4G0N7 80 aa5.53□□□□□ -1.52
PRDM9-201ENST00000296682 PSPHP1O15172 72 aa5.53□□□□□ -1.52
PRDM9-201ENST00000296682 TRAV22A0A0B4J277 110 aa5.52□□□□□ -1.53
PRDM9-201ENST00000296682 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
PRDM9-201ENST00000296682 A0A1B0GVX0 72 aa5.51□□□□□ -1.53
PRDM9-201ENST00000296682 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
PRDM9-201ENST00000296682 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
PRDM9-201ENST00000296682 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
PRDM9-201ENST00000296682 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
PRDM9-201ENST00000296682 PMAIP1Q13794 54 aa5.46□□□□□ -1.53
PRDM9-201ENST00000296682 LINC00313P59037 77 aa5.46□□□□□ -1.54
PRDM9-201ENST00000296682 CD164Q04900 197 aa5.46□□□□□ -1.54
PRDM9-201ENST00000296682 Q96NJ1 140 aa5.45□□□□□ -1.54
PRDM9-201ENST00000296682 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
PRDM9-201ENST00000296682 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
PRDM9-201ENST00000296682 SSBP3-AS1Q7Z2R9 100 aa5.45□□□□□ -1.54
PRDM9-201ENST00000296682 KRTAP21-3Q3LHN1 58 aa5.43□□□□□ -1.54
PRDM9-201ENST00000296682 KRTAP13-2Q52LG2 175 aa5.43□□□□□ -1.54
PRDM9-201ENST00000296682 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
PRDM9-201ENST00000296682 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
PRDM9-201ENST00000296682 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
PRDM9-201ENST00000296682 SPAG11AQ6PDA7 123 aa5.41□□□□□ -1.54
PRDM9-201ENST00000296682 TP53AIP1Q9HCN2 124 aa5.41□□□□□ -1.54
PRDM9-201ENST00000296682 PKHD1P08F94 4074 aa5.4□□□□□ -1.54
PRDM9-201ENST00000296682 Q5W150 140 aa5.4□□□□□ -1.55
PRDM9-201ENST00000296682 CHKB-CPT1BH3BT56 60 aa5.39□□□□□ -1.55
PRDM9-201ENST00000296682 H3BPC8 53 aa5.39□□□□□ -1.55
PRDM9-201ENST00000296682 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
PRDM9-201ENST00000296682 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
PRDM9-201ENST00000296682 A8MUN3 132 aa5.39□□□□□ -1.55
PRDM9-201ENST00000296682 Q6ZSA8 131 aa5.39□□□□□ -1.55
PRDM9-201ENST00000296682 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
PRDM9-201ENST00000296682 HYDINQ4G0P3 5121 aa5.38□□□□□ -1.55
PRDM9-201ENST00000296682 SPINK1P00995 79 aa5.38□□□□□ -1.55
PRDM9-201ENST00000296682 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
PRDM9-201ENST00000296682 COA5Q86WW8 74 aa5.37□□□□□ -1.55
PRDM9-201ENST00000296682 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
PRDM9-201ENST00000296682 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
PRDM9-201ENST00000296682 LRP1BQ9NZR2 4599 aa5.34□□□□□ -1.55
PRDM9-201ENST00000296682 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
PRDM9-201ENST00000296682 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
PRDM9-201ENST00000296682 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
PRDM9-201ENST00000296682 Q1T7F1 81 aa5.32□□□□□ -1.56
PRDM9-201ENST00000296682 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
PRDM9-201ENST00000296682 A6NED7 52 aa5.32□□□□□ -1.56
PRDM9-201ENST00000296682 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
PRDM9-201ENST00000296682 C8orf87E5RJ46 101 aa5.3□□□□□ -1.56
PRDM9-201ENST00000296682 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
PRDM9-201ENST00000296682 FAM229AH3BQW9 127 aa5.29□□□□□ -1.56
PRDM9-201ENST00000296682 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
PRDM9-201ENST00000296682 HRES1P13985 223 aa5.29□□□□□ -1.56
PRDM9-201ENST00000296682 Q8N1X5 172 aa5.29□□□□□ -1.56
PRDM9-201ENST00000296682 FAT1Q14517 4588 aa5.28□□□□□ -1.56
PRDM9-201ENST00000296682 APOBP04114 4563 aaKnown RBP5.28□□□□□ -1.56
PRDM9-201ENST00000296682 C7orf65Q6ZTY9 151 aa5.27□□□□□ -1.57
PRDM9-201ENST00000296682 A8MU10 97 aa5.25□□□□□ -1.57
PRDM9-201ENST00000296682 ACYP2P14621 99 aa5.24□□□□□ -1.57
PRDM9-201ENST00000296682 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
PRDM9-201ENST00000296682 RBM12B-AS1Q9P1G2 102 aa5.21□□□□□ -1.58
PRDM9-201ENST00000296682 J3QL48 77 aa5.19□□□□□ -1.58
PRDM9-201ENST00000296682 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
PRDM9-201ENST00000296682 Q5VSD8 79 aa5.18□□□□□ -1.58
PRDM9-201ENST00000296682 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
PRDM9-201ENST00000296682 Q5VV11 94 aa5.18□□□□□ -1.58
PRDM9-201ENST00000296682 DYNC1H1Q14204 4646 aaKnown RBP5.17□□□□□ -1.58
PRDM9-201ENST00000296682 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
PRDM9-201ENST00000296682 A0A1B0GU69 56 aa5.16□□□□□ -1.58
PRDM9-201ENST00000296682 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.59
PRDM9-201ENST00000296682 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.59
PRDM9-201ENST00000296682 TNXBP22105 4242 aa5.14□□□□□ -1.59
PRDM9-201ENST00000296682 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
PRDM9-201ENST00000296682 HSPG2P98160 4391 aa5.13□□□□□ -1.59
PRDM9-201ENST00000296682 SPINK7P58062 85 aa5.13□□□□□ -1.59
PRDM9-201ENST00000296682 RYR2Q92736 4967 aa5.13□□□□□ -1.59
PRDM9-201ENST00000296682 Q75L30 129 aa5.09□□□□□ -1.59
PRDM9-201ENST00000296682 DMAC1Q96GE9 116 aa5.09□□□□□ -1.6
PRDM9-201ENST00000296682 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
PRDM9-201ENST00000296682 LCA10Q71F78 164 aa5.08□□□□□ -1.6
PRDM9-201ENST00000296682 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
PRDM9-201ENST00000296682 A6NN06 94 aa5.07□□□□□ -1.6
PRDM9-201ENST00000296682 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
PRDM9-201ENST00000296682 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
PRDM9-201ENST00000296682 KIAA1109Q2LD37 5005 aa5.04□□□□□ -1.6
PRDM9-201ENST00000296682 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
PRDM9-201ENST00000296682 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
PRDM9-201ENST00000296682 UQCR11O14957 56 aa4.98□□□□□ -1.61
PRDM9-201ENST00000296682 A8MUU9 505 aa4.96□□□□□ -1.61
PRDM9-201ENST00000296682 RYR3Q15413 4870 aa4.96□□□□□ -1.62
PRDM9-201ENST00000296682 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
PRDM9-201ENST00000296682 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
PRDM9-201ENST00000296682 KRTAP17-1Q9BYP8 105 aa4.93□□□□□ -1.62
PRDM9-201ENST00000296682 RYR1P21817 5038 aa4.93□□□□□ -1.62
PRDM9-201ENST00000296682 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms