RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 Q6ZVQ6 151 aa4.89□□□□□ -1.63
TFF1-201ENST00000291527 DEFB105AQ8NG35 78 aa4.89□□□□□ -1.63
TFF1-201ENST00000291527 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
TFF1-201ENST00000291527 IGKV3D-7A0A0C4DH55 119 aa4.88□□□□□ -1.63
TFF1-201ENST00000291527 SPRR1BP22528 89 aa4.88□□□□□ -1.63
TFF1-201ENST00000291527 LINC01547P58512 204 aaPredicted RBP4.88□□□□□ -1.63
TFF1-201ENST00000291527 FP248Q71RG6 208 aaPredicted RBP4.88□□□□□ -1.63
TFF1-201ENST00000291527 IGLV8-61A0A075B6I0 122 aa4.87□□□□□ -1.63
TFF1-201ENST00000291527 UQCRQO14949 82 aa4.87□□□□□ -1.63
TFF1-201ENST00000291527 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
TFF1-201ENST00000291527 ST20-AS1Q8NBB2 130 aa4.86□□□□□ -1.63
TFF1-201ENST00000291527 SPINK1P00995 79 aa4.85□□□□□ -1.63
TFF1-201ENST00000291527 XP32Q5T750 250 aa4.85□□□□□ -1.63
TFF1-201ENST00000291527 BPY2O14599 106 aa4.84□□□□□ -1.63
TFF1-201ENST00000291527 COX7CP15954 63 aa4.84□□□□□ -1.63
TFF1-201ENST00000291527 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
TFF1-201ENST00000291527 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
TFF1-201ENST00000291527 MT1HP80294 61 aa4.82□□□□□ -1.64
TFF1-201ENST00000291527 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
TFF1-201ENST00000291527 SMIM29Q86T20 159 aa4.82□□□□□ -1.64
TFF1-201ENST00000291527 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
TFF1-201ENST00000291527 HRCT1Q6UXD1 115 aa4.81□□□□□ -1.64
TFF1-201ENST00000291527 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
TFF1-201ENST00000291527 TRAV7A0A075B6U4 112 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 A0A0G2JQZ4 141 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 A0A1W2PNM2 257 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 C9orf92A6NGG3 77 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 J3KT08 172 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 PCOTHQ58A44 107 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 SS18L2Q9UHA2 77 aa4.79□□□□□ -1.64
TFF1-201ENST00000291527 A0A087WVE0 104 aa4.78□□□□□ -1.64
TFF1-201ENST00000291527 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
TFF1-201ENST00000291527 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
TFF1-201ENST00000291527 NDUFC1O43677 76 aa4.77□□□□□ -1.65
TFF1-201ENST00000291527 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
TFF1-201ENST00000291527 NDUFB1O75438 58 aa4.74□□□□□ -1.65
TFF1-201ENST00000291527 IGKV4-1P06312 121 aa4.74□□□□□ -1.65
TFF1-201ENST00000291527 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
TFF1-201ENST00000291527 TMEM258P61165 79 aa4.74□□□□□ -1.65
TFF1-201ENST00000291527 A0A087WSZ3 146 aa4.73□□□□□ -1.65
TFF1-201ENST00000291527 CD164Q04900 197 aa4.72□□□□□ -1.65
TFF1-201ENST00000291527 KLKP1Q107X0 134 aa4.71□□□□□ -1.66
TFF1-201ENST00000291527 A8MWP4 228 aa4.7□□□□□ -1.66
TFF1-201ENST00000291527 HCG22E2RYF7 251 aa4.7□□□□□ -1.66
TFF1-201ENST00000291527 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
TFF1-201ENST00000291527 DSCR10P59022 87 aa4.69□□□□□ -1.66
TFF1-201ENST00000291527 C1orf195Q5TG92 126 aa4.69□□□□□ -1.66
TFF1-201ENST00000291527 C5orf47Q569G3 176 aa4.68□□□□□ -1.66
TFF1-201ENST00000291527 C20orf197Q8N268 126 aa4.68□□□□□ -1.66
TFF1-201ENST00000291527 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
TFF1-201ENST00000291527 USH2AO75445 5202 aa4.68□□□□□ -1.66
TFF1-201ENST00000291527 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
TFF1-201ENST00000291527 PRR15Q8IV56 129 aa4.67□□□□□ -1.66
TFF1-201ENST00000291527 OCR1Q9BZK8 76 aa4.67□□□□□ -1.66
TFF1-201ENST00000291527 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
TFF1-201ENST00000291527 H3BPC8 53 aa4.66□□□□□ -1.66
TFF1-201ENST00000291527 K7EQZ3 153 aa4.66□□□□□ -1.66
TFF1-201ENST00000291527 Q8N9L7 120 aa4.66□□□□□ -1.66
TFF1-201ENST00000291527 MP68P56378 58 aa4.65□□□□□ -1.67
TFF1-201ENST00000291527 TMEM254Q8TBM7 123 aa4.65□□□□□ -1.67
TFF1-201ENST00000291527 LIMD2Q9BT23 127 aa4.65□□□□□ -1.67
TFF1-201ENST00000291527 TP53AIP1Q9HCN2 124 aa4.65□□□□□ -1.67
TFF1-201ENST00000291527 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
TFF1-201ENST00000291527 CASC2Q6XLA1 102 aa4.64□□□□□ -1.67
TFF1-201ENST00000291527 Q5XG85 94 aa4.63□□□□□ -1.67
TFF1-201ENST00000291527 FAM236DA0A1B0GTK5 79 aa4.62□□□□□ -1.67
TFF1-201ENST00000291527 M0R2T5 61 aa4.62□□□□□ -1.67
TFF1-201ENST00000291527 FAM236CP0DP71 79 aa4.62□□□□□ -1.67
TFF1-201ENST00000291527 C8orf87E5RJ46 101 aa4.61□□□□□ -1.67
TFF1-201ENST00000291527 A0A1B0GVX0 72 aa4.6□□□□□ -1.67
TFF1-201ENST00000291527 hDV103S1A0JD37 113 aa4.6□□□□□ -1.67
TFF1-201ENST00000291527 H7BZZ5 65 aa4.6□□□□□ -1.67
TFF1-201ENST00000291527 DEFB116Q30KQ4 102 aa4.59□□□□□ -1.67
TFF1-201ENST00000291527 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
TFF1-201ENST00000291527 WFDC13Q8IUB5 93 aa4.58□□□□□ -1.68
TFF1-201ENST00000291527 Q96NJ1 140 aa4.58□□□□□ -1.68
TFF1-201ENST00000291527 SNURFQ9Y675 71 aa4.58□□□□□ -1.68
TFF1-201ENST00000291527 SERP1Q9Y6X1 66 aa4.58□□□□□ -1.68
TFF1-201ENST00000291527 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
TFF1-201ENST00000291527 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
TFF1-201ENST00000291527 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
TFF1-201ENST00000291527 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
TFF1-201ENST00000291527 MRPL34Q9BQ48 92 aaKnown RBP4.55□□□□□ -1.68
TFF1-201ENST00000291527 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
TFF1-201ENST00000291527 TRAV22A0A0B4J277 110 aa4.54□□□□□ -1.68
TFF1-201ENST00000291527 H0Y9P7 68 aa4.54□□□□□ -1.68
TFF1-201ENST00000291527 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
TFF1-201ENST00000291527 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
TFF1-201ENST00000291527 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
TFF1-201ENST00000291527 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
TFF1-201ENST00000291527 LINC00208Q96KT6 92 aa4.51□□□□□ -1.69
TFF1-201ENST00000291527 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 NDUFS5O43920 106 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 LINC00313P59037 77 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 Q75L30 129 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 C1orf64Q8NEQ6 169 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 CYP4F30PQ9H0H9 118 aa4.5□□□□□ -1.69
TFF1-201ENST00000291527 LOC101927531A0A1B0GV80 90 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms