RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 MT-ATP8P03928 68 aa5.16□□□□□ -1.58
HMHB1-201ENST00000289448 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
HMHB1-201ENST00000289448 Q6JHZ5 121 aa5.14□□□□□ -1.59
HMHB1-201ENST00000289448 UBL5Q9BZL1 73 aa5.14□□□□□ -1.59
HMHB1-201ENST00000289448 ATP5EP2Q5VTU8 51 aa5.13□□□□□ -1.59
HMHB1-201ENST00000289448 TRBV7-7A0A0K0K1E9 115 aa5.12□□□□□ -1.59
HMHB1-201ENST00000289448 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
HMHB1-201ENST00000289448 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
HMHB1-201ENST00000289448 Q6Q795 121 aa5.12□□□□□ -1.59
HMHB1-201ENST00000289448 IMUPQ9GZP8 106 aa5.12□□□□□ -1.59
HMHB1-201ENST00000289448 MT1HP80294 61 aa5.11□□□□□ -1.59
HMHB1-201ENST00000289448 IGFL1Q6UW32 110 aa5.11□□□□□ -1.59
HMHB1-201ENST00000289448 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
HMHB1-201ENST00000289448 Q6ZVQ6 151 aa5.1□□□□□ -1.59
HMHB1-201ENST00000289448 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
HMHB1-201ENST00000289448 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
HMHB1-201ENST00000289448 IGKV3D-7A0A0C4DH55 119 aa5.07□□□□□ -1.6
HMHB1-201ENST00000289448 CXCL6P80162 114 aa5.07□□□□□ -1.6
HMHB1-201ENST00000289448 NREPQ16612 68 aa5.07□□□□□ -1.6
HMHB1-201ENST00000289448 A0A087WSZ3 146 aa5.03□□□□□ -1.6
HMHB1-201ENST00000289448 BPY2O14599 106 aa5.02□□□□□ -1.61
HMHB1-201ENST00000289448 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
HMHB1-201ENST00000289448 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
HMHB1-201ENST00000289448 HIST1H4AP62805 103 aaKnown RBP5.02□□□□□ -1.61
HMHB1-201ENST00000289448 PCP4P48539 62 aa5.01□□□□□ -1.61
HMHB1-201ENST00000289448 FAM236AA0A1B0GUQ0 79 aa5□□□□□ -1.61
HMHB1-201ENST00000289448 FAM236BA0A1B0GV22 79 aa5□□□□□ -1.61
HMHB1-201ENST00000289448 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
HMHB1-201ENST00000289448 SS18L2Q9UHA2 77 aa5□□□□□ -1.61
HMHB1-201ENST00000289448 A0A087WVE0 104 aa4.98□□□□□ -1.61
HMHB1-201ENST00000289448 J3KT08 172 aa4.97□□□□□ -1.61
HMHB1-201ENST00000289448 IGKV4-1P06312 121 aa4.97□□□□□ -1.61
HMHB1-201ENST00000289448 COX6B2Q6YFQ2 88 aa4.97□□□□□ -1.61
HMHB1-201ENST00000289448 Q75L30 129 aa4.97□□□□□ -1.61
HMHB1-201ENST00000289448 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
HMHB1-201ENST00000289448 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
HMHB1-201ENST00000289448 M0R2T5 61 aa4.96□□□□□ -1.62
HMHB1-201ENST00000289448 ATOX1O00244 68 aa4.96□□□□□ -1.62
HMHB1-201ENST00000289448 DSCR10P59022 87 aa4.96□□□□□ -1.62
HMHB1-201ENST00000289448 ATP11AUNQ6ZP68 121 aa4.95□□□□□ -1.62
HMHB1-201ENST00000289448 Q8N9L7 120 aa4.95□□□□□ -1.62
HMHB1-201ENST00000289448 Q96NJ1 140 aa4.95□□□□□ -1.62
HMHB1-201ENST00000289448 A8MWP4 228 aa4.93□□□□□ -1.62
HMHB1-201ENST00000289448 K7EQZ3 153 aa4.93□□□□□ -1.62
HMHB1-201ENST00000289448 DEFB116Q30KQ4 102 aa4.92□□□□□ -1.62
HMHB1-201ENST00000289448 PRR15Q8IV56 129 aa4.92□□□□□ -1.62
HMHB1-201ENST00000289448 C20orf166-AS1Q96NR2 134 aa4.92□□□□□ -1.62
HMHB1-201ENST00000289448 A8MUU9 505 aa4.91□□□□□ -1.62
HMHB1-201ENST00000289448 NDUFB1O75438 58 aa4.91□□□□□ -1.62
HMHB1-201ENST00000289448 SMIM20Q8N5G0 67 aa4.91□□□□□ -1.62
HMHB1-201ENST00000289448 SERP2Q8N6R1 65 aa4.9□□□□□ -1.63
HMHB1-201ENST00000289448 HCG22E2RYF7 251 aa4.89□□□□□ -1.63
HMHB1-201ENST00000289448 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
HMHB1-201ENST00000289448 A0A1B0GVX0 72 aa4.87□□□□□ -1.63
HMHB1-201ENST00000289448 KRTAP16-1A8MUX0 517 aa4.87□□□□□ -1.63
HMHB1-201ENST00000289448 UQCRQO14949 82 aa4.87□□□□□ -1.63
HMHB1-201ENST00000289448 COX7CP15954 63 aa4.87□□□□□ -1.63
HMHB1-201ENST00000289448 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
HMHB1-201ENST00000289448 CASC2Q6XLA1 102 aa4.85□□□□□ -1.63
HMHB1-201ENST00000289448 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 CCDC179H3BU77 68 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 LINC00313P59037 77 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
HMHB1-201ENST00000289448 USH2AO75445 5202 aa4.83□□□□□ -1.64
HMHB1-201ENST00000289448 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
HMHB1-201ENST00000289448 IGHV6-1A0A0B4J1U7 121 aa4.83□□□□□ -1.64
HMHB1-201ENST00000289448 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
HMHB1-201ENST00000289448 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
HMHB1-201ENST00000289448 TMEM254Q8TBM7 123 aa4.8□□□□□ -1.64
HMHB1-201ENST00000289448 HRES1P13985 223 aa4.78□□□□□ -1.64
HMHB1-201ENST00000289448 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
HMHB1-201ENST00000289448 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
HMHB1-201ENST00000289448 C5orf47Q569G3 176 aa4.77□□□□□ -1.65
HMHB1-201ENST00000289448 C20orf197Q8N268 126 aa4.77□□□□□ -1.65
HMHB1-201ENST00000289448 TP53AIP1Q9HCN2 124 aa4.77□□□□□ -1.65
HMHB1-201ENST00000289448 MT2AP02795 61 aa4.76□□□□□ -1.65
HMHB1-201ENST00000289448 KLKP1Q107X0 134 aa4.76□□□□□ -1.65
HMHB1-201ENST00000289448 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
HMHB1-201ENST00000289448 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
HMHB1-201ENST00000289448 MP68P56378 58 aa4.74□□□□□ -1.65
HMHB1-201ENST00000289448 H3BPC8 53 aa4.73□□□□□ -1.65
HMHB1-201ENST00000289448 NDUFC1O43677 76 aa4.73□□□□□ -1.65
HMHB1-201ENST00000289448 NDUFS5O43920 106 aa4.73□□□□□ -1.65
HMHB1-201ENST00000289448 MT1FP04733 61 aa4.73□□□□□ -1.65
HMHB1-201ENST00000289448 H0Y9P7 68 aa4.72□□□□□ -1.65
HMHB1-201ENST00000289448 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
HMHB1-201ENST00000289448 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
HMHB1-201ENST00000289448 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
HMHB1-201ENST00000289448 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
HMHB1-201ENST00000289448 CYSTM1Q9H1C7 97 aa4.71□□□□□ -1.66
HMHB1-201ENST00000289448 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
HMHB1-201ENST00000289448 TMEM258P61165 79 aa4.7□□□□□ -1.66
HMHB1-201ENST00000289448 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
HMHB1-201ENST00000289448 H7BZZ5 65 aa4.69□□□□□ -1.66
HMHB1-201ENST00000289448 LCE2BO14633 110 aa4.69□□□□□ -1.66
HMHB1-201ENST00000289448 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
HMHB1-201ENST00000289448 SPINK7P58062 85 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms