RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 LYRM7Q5U5X0 104 aa7.1□□□□□ -1.27
TPM1-202ENST00000288398 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
TPM1-202ENST00000288398 CCKP06307 115 aa7.09□□□□□ -1.27
TPM1-202ENST00000288398 GTF2H5Q6ZYL4 71 aa7.09□□□□□ -1.27
TPM1-202ENST00000288398 K7EP34 96 aa7.08□□□□□ -1.28
TPM1-202ENST00000288398 DEFB116Q30KQ4 102 aa7.08□□□□□ -1.28
TPM1-202ENST00000288398 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
TPM1-202ENST00000288398 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
TPM1-202ENST00000288398 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
TPM1-202ENST00000288398 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
TPM1-202ENST00000288398 SPCS1Q9Y6A9 102 aa7.05□□□□□ -1.28
TPM1-202ENST00000288398 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
TPM1-202ENST00000288398 NAA38Q9BRA0 125 aaKnown RBP7.03□□□□□ -1.28
TPM1-202ENST00000288398 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
TPM1-202ENST00000288398 NOTCH2NLQ7Z3S9 236 aa7.02□□□□□ -1.29
TPM1-202ENST00000288398 F8W1H4 67 aa7.01□□□□□ -1.29
TPM1-202ENST00000288398 HRES1P13985 223 aa7.01□□□□□ -1.29
TPM1-202ENST00000288398 DSCR8Q96T75 97 aa7.01□□□□□ -1.29
TPM1-202ENST00000288398 A0A1B0GVX0 72 aa7□□□□□ -1.29
TPM1-202ENST00000288398 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
TPM1-202ENST00000288398 MT2AP02795 61 aa7□□□□□ -1.29
TPM1-202ENST00000288398 SCGB1C2P0DMR2 95 aa7□□□□□ -1.29
TPM1-202ENST00000288398 RBM3P98179 157 aaKnown RBP7□□□□□ -1.29
TPM1-202ENST00000288398 PRO0461Q9UI25 63 aa7□□□□□ -1.29
TPM1-202ENST00000288398 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
TPM1-202ENST00000288398 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
TPM1-202ENST00000288398 J3KT08 172 aa6.98□□□□□ -1.29
TPM1-202ENST00000288398 ATXN8Q156A1 80 aa6.98□□□□□ -1.29
TPM1-202ENST00000288398 MPLKIPQ8TAP9 179 aa6.98□□□□□ -1.29
TPM1-202ENST00000288398 NDUFB1O75438 58 aa6.96□□□□□ -1.3
TPM1-202ENST00000288398 USH2AO75445 5202 aa6.96□□□□□ -1.3
TPM1-202ENST00000288398 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
TPM1-202ENST00000288398 C9JAW5 83 aa6.94□□□□□ -1.3
TPM1-202ENST00000288398 MT1FP04733 61 aa6.94□□□□□ -1.3
TPM1-202ENST00000288398 H3BT86 120 aa6.93□□□□□ -1.3
TPM1-202ENST00000288398 SPINK7P58062 85 aa6.92□□□□□ -1.3
TPM1-202ENST00000288398 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
TPM1-202ENST00000288398 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.3
TPM1-202ENST00000288398 LINC00846Q9NV44 126 aa6.9□□□□□ -1.3
TPM1-202ENST00000288398 Q6ZQT0 140 aa6.88□□□□□ -1.31
TPM1-202ENST00000288398 LCE2BO14633 110 aa6.87□□□□□ -1.31
TPM1-202ENST00000288398 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
TPM1-202ENST00000288398 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
TPM1-202ENST00000288398 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
TPM1-202ENST00000288398 ETDBQ3ZM63 59 aa6.85□□□□□ -1.31
TPM1-202ENST00000288398 WFDC13Q8IUB5 93 aa6.85□□□□□ -1.31
TPM1-202ENST00000288398 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
TPM1-202ENST00000288398 A8MWP4 228 aa6.84□□□□□ -1.31
TPM1-202ENST00000288398 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
TPM1-202ENST00000288398 C8orf17Q9NRJ1 99 aa6.84□□□□□ -1.31
TPM1-202ENST00000288398 A0A1B0GW54 56 aa6.83□□□□□ -1.32
TPM1-202ENST00000288398 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
TPM1-202ENST00000288398 PDE6GP18545 87 aa6.82□□□□□ -1.32
TPM1-202ENST00000288398 K7ERU9 68 aa6.8□□□□□ -1.32
TPM1-202ENST00000288398 Q6ZVQ6 151 aa6.8□□□□□ -1.32
TPM1-202ENST00000288398 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
TPM1-202ENST00000288398 J3QR89 54 aa6.79□□□□□ -1.32
TPM1-202ENST00000288398 IGKV3D-7A0A0C4DH55 119 aa6.78□□□□□ -1.32
TPM1-202ENST00000288398 NREPQ16612 68 aa6.77□□□□□ -1.33
TPM1-202ENST00000288398 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
TPM1-202ENST00000288398 NDUFS5O43920 106 aa6.75□□□□□ -1.33
TPM1-202ENST00000288398 PRR15Q8IV56 129 aa6.75□□□□□ -1.33
TPM1-202ENST00000288398 FAM240AA0A1B0GVK7 77 aa6.74□□□□□ -1.33
TPM1-202ENST00000288398 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
TPM1-202ENST00000288398 MRPL34Q9BQ48 92 aaKnown RBP6.73□□□□□ -1.33
TPM1-202ENST00000288398 ACYP1P07311 99 aa6.71□□□□□ -1.34
TPM1-202ENST00000288398 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
TPM1-202ENST00000288398 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
TPM1-202ENST00000288398 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
TPM1-202ENST00000288398 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
TPM1-202ENST00000288398 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
TPM1-202ENST00000288398 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
TPM1-202ENST00000288398 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
TPM1-202ENST00000288398 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
TPM1-202ENST00000288398 K7EQZ3 153 aa6.65□□□□□ -1.34
TPM1-202ENST00000288398 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
TPM1-202ENST00000288398 BPY2O14599 106 aa6.63□□□□□ -1.35
TPM1-202ENST00000288398 H3BS24 57 aa6.58□□□□□ -1.36
TPM1-202ENST00000288398 CASC2Q6XLA1 102 aa6.57□□□□□ -1.36
TPM1-202ENST00000288398 LINC00643Q86TS7 51 aa6.56□□□□□ -1.36
TPM1-202ENST00000288398 HCG22E2RYF7 251 aa6.55□□□□□ -1.36
TPM1-202ENST00000288398 Q5W150 140 aa6.54□□□□□ -1.36
TPM1-202ENST00000288398 IMUPQ9GZP8 106 aa6.54□□□□□ -1.36
TPM1-202ENST00000288398 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
TPM1-202ENST00000288398 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
TPM1-202ENST00000288398 C4orf26Q17RF5 130 aa6.53□□□□□ -1.36
TPM1-202ENST00000288398 CXCL6P80162 114 aa6.52□□□□□ -1.37
TPM1-202ENST00000288398 Q8N9L7 120 aa6.51□□□□□ -1.37
TPM1-202ENST00000288398 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
TPM1-202ENST00000288398 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
TPM1-202ENST00000288398 C5orf47Q569G3 176 aa6.49□□□□□ -1.37
TPM1-202ENST00000288398 UBL5Q9BZL1 73 aa6.49□□□□□ -1.37
TPM1-202ENST00000288398 MT-ATP8P03928 68 aa6.48□□□□□ -1.37
TPM1-202ENST00000288398 SCGB1A1P11684 91 aa6.48□□□□□ -1.37
TPM1-202ENST00000288398 S4R3F8 94 aa6.45□□□□□ -1.38
TPM1-202ENST00000288398 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
TPM1-202ENST00000288398 A6NN06 94 aa6.41□□□□□ -1.38
TPM1-202ENST00000288398 Q5VV11 94 aa6.4□□□□□ -1.38
TPM1-202ENST00000288398 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
TPM1-202ENST00000288398 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms