RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PCOTHQ58A44 107 aa4.87□□□□□ -1.63
HMGN1-201ENST00000288344 LINC00472Q9H8W2 130 aa4.87□□□□□ -1.63
HMGN1-201ENST00000288344 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
HMGN1-201ENST00000288344 BAALC-AS2P0C853 105 aa4.86□□□□□ -1.63
HMGN1-201ENST00000288344 NAA38Q9BRA0 125 aaKnown RBP4.86□□□□□ -1.63
HMGN1-201ENST00000288344 DNAL4O96015 105 aa4.85□□□□□ -1.63
HMGN1-201ENST00000288344 SCGB1C2P0DMR2 95 aa4.85□□□□□ -1.63
HMGN1-201ENST00000288344 ANKRD29Q8N6D5 301 aa4.85□□□□□ -1.63
HMGN1-201ENST00000288344 TSTD3H0UI37 97 aa4.84□□□□□ -1.63
HMGN1-201ENST00000288344 TAX1BP3O14907 124 aa4.84□□□□□ -1.63
HMGN1-201ENST00000288344 OBSCN-AS1Q96MR7 158 aa4.84□□□□□ -1.63
HMGN1-201ENST00000288344 SS18L2Q9UHA2 77 aa4.84□□□□□ -1.63
HMGN1-201ENST00000288344 A0A0U1RQV1 116 aa4.83□□□□□ -1.64
HMGN1-201ENST00000288344 C20orf166-AS1Q96NR2 134 aa4.83□□□□□ -1.64
HMGN1-201ENST00000288344 KRTAP16-1A8MUX0 517 aa4.82□□□□□ -1.64
HMGN1-201ENST00000288344 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
HMGN1-201ENST00000288344 RBM3P98179 157 aaKnown RBP4.82□□□□□ -1.64
HMGN1-201ENST00000288344 A8MUU9 505 aa4.81□□□□□ -1.64
HMGN1-201ENST00000288344 CCKP06307 115 aa4.81□□□□□ -1.64
HMGN1-201ENST00000288344 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
HMGN1-201ENST00000288344 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
HMGN1-201ENST00000288344 TRBV20-1A0A075B6N2 111 aa4.79□□□□□ -1.64
HMGN1-201ENST00000288344 LOC110117498A0A087WWA1 95 aa4.79□□□□□ -1.64
HMGN1-201ENST00000288344 A0A1B0GV72 72 aa4.79□□□□□ -1.64
HMGN1-201ENST00000288344 Q6ZQT0 140 aa4.79□□□□□ -1.64
HMGN1-201ENST00000288344 A0A1B0GW54 56 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 C9JAW5 83 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 JMJD7-PLA2G4BH0Y9G9 81 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 MT1HP80294 61 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 Q8N9P0 234 aaPredicted RBP4.76□□□□□ -1.65
HMGN1-201ENST00000288344 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
HMGN1-201ENST00000288344 IGKV4-1P06312 121 aa4.75□□□□□ -1.65
HMGN1-201ENST00000288344 DSCR10P59022 87 aa4.75□□□□□ -1.65
HMGN1-201ENST00000288344 BATFQ16520 125 aa4.75□□□□□ -1.65
HMGN1-201ENST00000288344 PDE6GP18545 87 aa4.73□□□□□ -1.65
HMGN1-201ENST00000288344 LINC00313P59037 77 aa4.73□□□□□ -1.65
HMGN1-201ENST00000288344 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
HMGN1-201ENST00000288344 H3BT86 120 aa4.72□□□□□ -1.65
HMGN1-201ENST00000288344 PRO0461Q9UI25 63 aa4.72□□□□□ -1.65
HMGN1-201ENST00000288344 ATP11AUNQ6ZP68 121 aa4.72□□□□□ -1.65
HMGN1-201ENST00000288344 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
HMGN1-201ENST00000288344 A0A1B0GVX0 72 aa4.71□□□□□ -1.66
HMGN1-201ENST00000288344 VPS25Q9BRG1 176 aa4.71□□□□□ -1.66
HMGN1-201ENST00000288344 J3KT08 172 aa4.7□□□□□ -1.66
HMGN1-201ENST00000288344 SIGMAR1Q99720 223 aa4.7□□□□□ -1.66
HMGN1-201ENST00000288344 IGKV3D-7A0A0C4DH55 119 aa4.69□□□□□ -1.66
HMGN1-201ENST00000288344 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
HMGN1-201ENST00000288344 MTURNQ8N3F0 131 aa4.69□□□□□ -1.66
HMGN1-201ENST00000288344 IGHV6-1A0A0B4J1U7 121 aa4.68□□□□□ -1.66
HMGN1-201ENST00000288344 C8orf87E5RJ46 101 aa4.68□□□□□ -1.66
HMGN1-201ENST00000288344 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
HMGN1-201ENST00000288344 A8MWP4 228 aa4.67□□□□□ -1.66
HMGN1-201ENST00000288344 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
HMGN1-201ENST00000288344 PRR15Q8IV56 129 aa4.65□□□□□ -1.67
HMGN1-201ENST00000288344 K7EP34 96 aa4.64□□□□□ -1.67
HMGN1-201ENST00000288344 HRES1P13985 223 aa4.64□□□□□ -1.67
HMGN1-201ENST00000288344 C8orf17Q9NRJ1 99 aa4.64□□□□□ -1.67
HMGN1-201ENST00000288344 NREPQ16612 68 aa4.62□□□□□ -1.67
HMGN1-201ENST00000288344 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
HMGN1-201ENST00000288344 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
HMGN1-201ENST00000288344 NDUFB1O75438 58 aa4.6□□□□□ -1.67
HMGN1-201ENST00000288344 ZCCHC13Q8WW36 166 aaKnown RBP4.6□□□□□ -1.67
HMGN1-201ENST00000288344 Q6ZVQ6 151 aa4.59□□□□□ -1.67
HMGN1-201ENST00000288344 PCP4L1A6NKN8 68 aa4.58□□□□□ -1.68
HMGN1-201ENST00000288344 K7EQZ3 153 aa4.58□□□□□ -1.68
HMGN1-201ENST00000288344 LINC00846Q9NV44 126 aa4.58□□□□□ -1.68
HMGN1-201ENST00000288344 F8W1H4 67 aa4.56□□□□□ -1.68
HMGN1-201ENST00000288344 SPINK7P58062 85 aa4.56□□□□□ -1.68
HMGN1-201ENST00000288344 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
HMGN1-201ENST00000288344 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
HMGN1-201ENST00000288344 TMEM254Q8TBM7 123 aa4.56□□□□□ -1.68
HMGN1-201ENST00000288344 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
HMGN1-201ENST00000288344 MRPL34Q9BQ48 92 aaKnown RBP4.55□□□□□ -1.68
HMGN1-201ENST00000288344 BPY2O14599 106 aa4.54□□□□□ -1.68
HMGN1-201ENST00000288344 Q5W150 140 aa4.54□□□□□ -1.68
HMGN1-201ENST00000288344 hDV103S1A0JD37 113 aa4.53□□□□□ -1.68
HMGN1-201ENST00000288344 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
HMGN1-201ENST00000288344 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
HMGN1-201ENST00000288344 Q8N9L7 120 aa4.53□□□□□ -1.68
HMGN1-201ENST00000288344 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
HMGN1-201ENST00000288344 M0R2T5 61 aa4.5□□□□□ -1.69
HMGN1-201ENST00000288344 RBM12B-AS1Q9P1G2 102 aa4.48□□□□□ -1.69
HMGN1-201ENST00000288344 USH2AO75445 5202 aa4.48□□□□□ -1.69
HMGN1-201ENST00000288344 MT2AP02795 61 aa4.47□□□□□ -1.69
HMGN1-201ENST00000288344 UBL5Q9BZL1 73 aa4.47□□□□□ -1.69
HMGN1-201ENST00000288344 CASC2Q6XLA1 102 aa4.46□□□□□ -1.69
HMGN1-201ENST00000288344 CXCL6P80162 114 aa4.46□□□□□ -1.7
HMGN1-201ENST00000288344 WFDC13Q8IUB5 93 aa4.46□□□□□ -1.7
HMGN1-201ENST00000288344 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
HMGN1-201ENST00000288344 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
HMGN1-201ENST00000288344 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
HMGN1-201ENST00000288344 MT1FP04733 61 aa4.44□□□□□ -1.7
HMGN1-201ENST00000288344 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
HMGN1-201ENST00000288344 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
HMGN1-201ENST00000288344 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
HMGN1-201ENST00000288344 ACYP1P07311 99 aa4.41□□□□□ -1.7
HMGN1-201ENST00000288344 A0A1B0GV90 55 aa4.4□□□□□ -1.71
HMGN1-201ENST00000288344 NDUFS5O43920 106 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms