RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 Q96NJ1 140 aa3.57□□□□□ -1.84
TNFSF4-201ENST00000281834 SACSQ9NZJ4 4579 aa3.57□□□□□ -1.84
TNFSF4-201ENST00000281834 FLG2Q5D862 2391 aaPredicted RBP3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 C8orf17Q9NRJ1 99 aa3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 PLA2G1BP04054 148 aaKnown RBP3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 C1orf64Q8NEQ6 169 aa3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
TNFSF4-201ENST00000281834 A0A1B0GVX0 72 aa3.55□□□□□ -1.84
TNFSF4-201ENST00000281834 FAM229BQ4G0N7 80 aa3.55□□□□□ -1.84
TNFSF4-201ENST00000281834 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 ALMS1Q8TCU4 4167 aa3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 TRAV22A0A0B4J277 110 aa3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 CHKB-CPT1BH3BT56 60 aa3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 DMBT1Q9UGM3 2413 aaPredicted RBP3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 C4orf48Q5BLP8 95 aa3.54□□□□□ -1.84
TNFSF4-201ENST00000281834 Q6ZSA8 131 aa3.53□□□□□ -1.84
TNFSF4-201ENST00000281834 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
TNFSF4-201ENST00000281834 FP248Q71RG6 208 aaPredicted RBP3.52□□□□□ -1.85
TNFSF4-201ENST00000281834 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
TNFSF4-201ENST00000281834 DYNC1H1Q14204 4646 aaKnown RBP3.52□□□□□ -1.85
TNFSF4-201ENST00000281834 MRPL34Q9BQ48 92 aaKnown RBP3.52□□□□□ -1.85
TNFSF4-201ENST00000281834 SSBP3-AS1Q7Z2R9 100 aa3.51□□□□□ -1.85
TNFSF4-201ENST00000281834 PKD1P98161 4303 aa3.51□□□□□ -1.85
TNFSF4-201ENST00000281834 A6NED7 52 aa3.51□□□□□ -1.85
TNFSF4-201ENST00000281834 ZCCHC13Q8WW36 166 aaKnown RBP3.51□□□□□ -1.85
TNFSF4-201ENST00000281834 A8MUN3 132 aa3.5□□□□□ -1.85
TNFSF4-201ENST00000281834 LCE6AA0A183 80 aa3.5□□□□□ -1.85
TNFSF4-201ENST00000281834 ATP5EP56381 51 aaPredicted RBP3.5□□□□□ -1.85
TNFSF4-201ENST00000281834 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
TNFSF4-201ENST00000281834 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
TNFSF4-201ENST00000281834 LINC00313P59037 77 aa3.49□□□□□ -1.85
TNFSF4-201ENST00000281834 Q5W150 140 aa3.49□□□□□ -1.85
TNFSF4-201ENST00000281834 A8MU10 97 aa3.47□□□□□ -1.85
TNFSF4-201ENST00000281834 CD164Q04900 197 aa3.47□□□□□ -1.85
TNFSF4-201ENST00000281834 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
TNFSF4-201ENST00000281834 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
TNFSF4-201ENST00000281834 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
TNFSF4-201ENST00000281834 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
TNFSF4-201ENST00000281834 Q8N9P0 234 aaPredicted RBP3.46□□□□□ -1.86
TNFSF4-201ENST00000281834 LINC00304Q8N9R0 145 aa3.45□□□□□ -1.86
TNFSF4-201ENST00000281834 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
TNFSF4-201ENST00000281834 H3BPC8 53 aa3.44□□□□□ -1.86
TNFSF4-201ENST00000281834 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
TNFSF4-201ENST00000281834 RYR2Q92736 4967 aa3.43□□□□□ -1.86
TNFSF4-201ENST00000281834 ASB16-AS1Q495Z4 193 aa3.43□□□□□ -1.86
TNFSF4-201ENST00000281834 COA5Q86WW8 74 aa3.43□□□□□ -1.86
TNFSF4-201ENST00000281834 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
TNFSF4-201ENST00000281834 C8orf87E5RJ46 101 aa3.42□□□□□ -1.86
TNFSF4-201ENST00000281834 SPINK1P00995 79 aa3.42□□□□□ -1.86
TNFSF4-201ENST00000281834 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
TNFSF4-201ENST00000281834 CYP4F30PQ9H0H9 118 aa3.42□□□□□ -1.86
TNFSF4-201ENST00000281834 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
TNFSF4-201ENST00000281834 A0A1B0GVY2 172 aa3.41□□□□□ -1.86
TNFSF4-201ENST00000281834 IGLV7-46A0A075B6I9 117 aa3.4□□□□□ -1.86
TNFSF4-201ENST00000281834 RYR3Q15413 4870 aa3.4□□□□□ -1.86
TNFSF4-201ENST00000281834 LOC101927531A0A1B0GV80 90 aa3.4□□□□□ -1.86
TNFSF4-201ENST00000281834 SPANXA2-OT1Q8N9U9 137 aa3.4□□□□□ -1.86
TNFSF4-201ENST00000281834 FAM229AH3BQW9 127 aa3.4□□□□□ -1.87
TNFSF4-201ENST00000281834 HRES1P13985 223 aa3.39□□□□□ -1.87
TNFSF4-201ENST00000281834 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
TNFSF4-201ENST00000281834 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
TNFSF4-201ENST00000281834 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
TNFSF4-201ENST00000281834 Q8N1X5 172 aa3.37□□□□□ -1.87
TNFSF4-201ENST00000281834 Q5VSD8 79 aa3.36□□□□□ -1.87
TNFSF4-201ENST00000281834 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
TNFSF4-201ENST00000281834 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
TNFSF4-201ENST00000281834 C7orf65Q6ZTY9 151 aa3.35□□□□□ -1.87
TNFSF4-201ENST00000281834 Q1T7F1 81 aa3.35□□□□□ -1.87
TNFSF4-201ENST00000281834 KRTAP10-4P60372 401 aaPredicted RBP3.34□□□□□ -1.87
TNFSF4-201ENST00000281834 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
TNFSF4-201ENST00000281834 H3BS24 57 aa3.34□□□□□ -1.88
TNFSF4-201ENST00000281834 ACYP2P14621 99 aa3.34□□□□□ -1.88
TNFSF4-201ENST00000281834 Q5VV11 94 aa3.32□□□□□ -1.88
TNFSF4-201ENST00000281834 HSPG2P98160 4391 aa3.32□□□□□ -1.88
TNFSF4-201ENST00000281834 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
TNFSF4-201ENST00000281834 RYR1P21817 5038 aa3.31□□□□□ -1.88
TNFSF4-201ENST00000281834 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
TNFSF4-201ENST00000281834 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
TNFSF4-201ENST00000281834 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
TNFSF4-201ENST00000281834 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
TNFSF4-201ENST00000281834 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
TNFSF4-201ENST00000281834 SPINK7P58062 85 aa3.28□□□□□ -1.88
TNFSF4-201ENST00000281834 RPS29P62273 56 aaKnown RBP3.27□□□□□ -1.89
TNFSF4-201ENST00000281834 LCA10Q71F78 164 aa3.27□□□□□ -1.89
TNFSF4-201ENST00000281834 A0A1B0GU69 56 aa3.26□□□□□ -1.89
TNFSF4-201ENST00000281834 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
TNFSF4-201ENST00000281834 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
TNFSF4-201ENST00000281834 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
TNFSF4-201ENST00000281834 A8MUU9 505 aa3.24□□□□□ -1.89
TNFSF4-201ENST00000281834 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
TNFSF4-201ENST00000281834 Q75L30 129 aa3.24□□□□□ -1.89
TNFSF4-201ENST00000281834 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
TNFSF4-201ENST00000281834 TNXBP22105 4242 aa3.22□□□□□ -1.89
TNFSF4-201ENST00000281834 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.89
TNFSF4-201ENST00000281834 LRP2P98164 4655 aa3.21□□□□□ -1.9
TNFSF4-201ENST00000281834 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms