RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 A6NED7 52 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 HCG22E2RYF7 251 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 RETNLBQ9BQ08 111 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP10-11P60412 298 aa1.85□□□□□ -2.11
HERC4-201ENST00000277817 Q6ZRX8 168 aa1.85□□□□□ -2.11
HERC4-201ENST00000277817 PHF5AQ7RTV0 110 aaKnown RBP1.85□□□□□ -2.11
HERC4-201ENST00000277817 GVQW2A0A096LPI5 108 aaPredicted RBP1.85□□□□□ -2.11
HERC4-201ENST00000277817 H0Y9P7 68 aa1.85□□□□□ -2.11
HERC4-201ENST00000277817 PRR34Q9NV39 138 aa1.85□□□□□ -2.11
HERC4-201ENST00000277817 NSD1Q96L73 2696 aaPredicted RBP1.85□□□□□ -2.11
HERC4-201ENST00000277817 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
HERC4-201ENST00000277817 RPL37AP61513 92 aaKnown RBP1.84□□□□□ -2.11
HERC4-201ENST00000277817 LINC00612Q8N6U2 182 aa1.84□□□□□ -2.11
HERC4-201ENST00000277817 A0A0G2JQZ4 141 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 A0A1W2PNN7 141 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 KRTAP16-1A8MUX0 517 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 C1orf64Q8NEQ6 169 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 PRR15LQ9BU68 103 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 A8MUN3 132 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 DNAH10OSP0CZ25 163 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 PRR15Q8IV56 129 aa1.84□□□□□ -2.12
HERC4-201ENST00000277817 IGLV1-50A0A075B6I6 118 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 C16orf90A8MZG2 172 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 MOBPQ13875 183 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 KCNQ1DNQ9H478 68 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 TRBV7-4A0A0J9YYF1 115 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 BCE1O60756 84 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 ZANQ9Y493 2812 aa1.83□□□□□ -2.12
HERC4-201ENST00000277817 NBDYA0A0U1RRE5 68 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 hDV103S1A0JD37 113 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 HIVEP1P15822 2718 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 K7EIL1 84 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 K7EQZ3 153 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 A0A1B0GW54 56 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 SPINK1P00995 79 aa1.82□□□□□ -2.12
HERC4-201ENST00000277817 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
HERC4-201ENST00000277817 SPACA4Q8TDM5 124 aa1.81□□□□□ -2.12
HERC4-201ENST00000277817 ITPR2Q14571 2701 aa1.81□□□□□ -2.12
HERC4-201ENST00000277817 RTL8CO15255 209 aa1.81□□□□□ -2.12
HERC4-201ENST00000277817 IGFL1Q6UW32 110 aa1.81□□□□□ -2.12
HERC4-201ENST00000277817 C8orf17Q9NRJ1 99 aa1.81□□□□□ -2.12
HERC4-201ENST00000277817 IGKV2D-30A0A075B6S6 120 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 IGKV2-30P06310 120 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 Q5W150 140 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 KRTAP9-8Q9BYQ0 159 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 SPAG11AQ6PDA7 123 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 OBSCN-AS1Q96MR7 158 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 ANAPC11Q9NYG5 84 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 TRAV22A0A0B4J277 110 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 A0A1W2PNM2 257 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 TLX1NBP0CAT3 122 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 Q8NDZ9 215 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 TP53AIP1Q9HCN2 124 aa1.8□□□□□ -2.12
HERC4-201ENST00000277817 H7BZZ5 65 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 A8MWP4 228 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 KLKP1Q107X0 134 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 Q6ZR54 194 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 COL7A1Q02388 2944 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 K7ERS5 55 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 ADM2Q7Z4H4 148 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 LIMD2Q9BT23 127 aa1.79□□□□□ -2.12
HERC4-201ENST00000277817 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
HERC4-201ENST00000277817 SPANXA2-OT1Q8N9U9 137 aa1.78□□□□□ -2.12
HERC4-201ENST00000277817 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
HERC4-201ENST00000277817 ACYP2P14621 99 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 NIPBLQ6KC79 2804 aaeCLIP1.77□□□□□ -2.135e-6■■■■■ 32.2
HERC4-201ENST00000277817 TENM3Q9P273 2699 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 IGLV5-48A0A075B6I7 105 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 H3BPC8 53 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 C7orf65Q6ZTY9 151 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 KRTAP7-1Q8IUC3 87 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 KRTAP9-3Q9BYQ3 159 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 A0A087WTM6 91 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 KTN1-AS1Q86SY8 53 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 TYMSOSQ8TAI1 123 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 APLNQ9ULZ1 77 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 TENM2Q9NT68 2774 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 A0A1B0GU69 56 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 ZNF861PO60384 105 aa1.77□□□□□ -2.13
HERC4-201ENST00000277817 MRPL34Q9BQ48 92 aaKnown RBP1.77□□□□□ -2.13
HERC4-201ENST00000277817 PSORS1C2Q9UIG4 136 aa1.76□□□□□ -2.13
HERC4-201ENST00000277817 CNBPP62633 177 aaKnown RBP1.76□□□□□ -2.13
HERC4-201ENST00000277817 Q96NJ1 140 aa1.76□□□□□ -2.13
HERC4-201ENST00000277817 DSCR10P59022 87 aa1.76□□□□□ -2.13
HERC4-201ENST00000277817 COA5Q86WW8 74 aa1.76□□□□□ -2.13
HERC4-201ENST00000277817 MXRA5Q9NR99 2828 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 CAMK2N1Q7Z7J9 78 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 A0A1B0GVY2 172 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 PANO1I0J062 215 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 SPRR4Q96PI1 79 aa1.75□□□□□ -2.13
HERC4-201ENST00000277817 SMR3BP02814 79 aaPredicted RBP1.75□□□□□ -2.13
HERC4-201ENST00000277817 Q8N9P0 234 aaPredicted RBP1.74□□□□□ -2.13
HERC4-201ENST00000277817 IGLV7-43P04211 117 aa1.74□□□□□ -2.13
HERC4-201ENST00000277817 SSBP3-AS1Q7Z2R9 100 aa1.74□□□□□ -2.13
HERC4-201ENST00000277817 PKD1L1Q8TDX9 2849 aa1.74□□□□□ -2.13
HERC4-201ENST00000277817 ATP11AUNQ6ZP68 121 aa1.74□□□□□ -2.13
HERC4-201ENST00000277817 KRTAP26-1Q6PEX3 210 aa1.73□□□□□ -2.13
HERC4-201ENST00000277817 SPRR1AP35321 89 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms