RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
SSC4D-201ENST00000275560 SPINK6Q6UWN8 80 aa11.13□□□□□ -0.63
SSC4D-201ENST00000275560 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
SSC4D-201ENST00000275560 Q5W150 140 aa11.11□□□□□ -0.63
SSC4D-201ENST00000275560 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
SSC4D-201ENST00000275560 DYNC2H1Q8NCM8 4307 aaKnown RBP11.1□□□□□ -0.63
SSC4D-201ENST00000275560 SPACA4Q8TDM5 124 aa11.08□□□□□ -0.64
SSC4D-201ENST00000275560 LINC00483Q53H64 154 aa11.07□□□□□ -0.64
SSC4D-201ENST00000275560 NBDYA0A0U1RRE5 68 aa11.06□□□□□ -0.64
SSC4D-201ENST00000275560 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
SSC4D-201ENST00000275560 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
SSC4D-201ENST00000275560 STARD9Q9P2P6 4700 aa11.03□□□□□ -0.64
SSC4D-201ENST00000275560 DNAH17Q9UFH2 4485 aa11.03□□□□□ -0.64
SSC4D-201ENST00000275560 KMT2AQ03164 3969 aa11.02□□□□□ -0.65
SSC4D-201ENST00000275560 MDFIQ99750 246 aa11.01□□□□□ -0.65
SSC4D-201ENST00000275560 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
SSC4D-201ENST00000275560 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
SSC4D-201ENST00000275560 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
SSC4D-201ENST00000275560 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
SSC4D-201ENST00000275560 IGLV5-52A0A0A0MRZ9 124 aa10.97□□□□□ -0.65
SSC4D-201ENST00000275560 KRTAP13-3Q3SY46 172 aa10.96□□□□□ -0.66
SSC4D-201ENST00000275560 TGP01266 2768 aa10.96□□□□□ -0.66
SSC4D-201ENST00000275560 FBN3Q75N90 2809 aa10.95□□□□□ -0.66
SSC4D-201ENST00000275560 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
SSC4D-201ENST00000275560 ZNF706Q9Y5V0 76 aaPredicted RBP10.95□□□□□ -0.66
SSC4D-201ENST00000275560 ZNF861PO60384 105 aa10.93□□□□□ -0.66
SSC4D-201ENST00000275560 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
SSC4D-201ENST00000275560 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
SSC4D-201ENST00000275560 A0A087WTM6 91 aa10.9□□□□□ -0.66
SSC4D-201ENST00000275560 RTL8CO15255 209 aa10.9□□□□□ -0.67
SSC4D-201ENST00000275560 PRAC1Q96KF2 57 aa10.89□□□□□ -0.67
SSC4D-201ENST00000275560 ACYP2P14621 99 aa10.87□□□□□ -0.67
SSC4D-201ENST00000275560 ADM2Q7Z4H4 148 aa10.86□□□□□ -0.67
SSC4D-201ENST00000275560 DNAH6Q9C0G6 4158 aa10.86□□□□□ -0.67
SSC4D-201ENST00000275560 LINC00313P59037 77 aa10.84□□□□□ -0.67
SSC4D-201ENST00000275560 PRKDCP78527 4128 aaKnown RBP10.8□□□□□ -0.68
SSC4D-201ENST00000275560 DMAC1Q96GE9 116 aa10.79□□□□□ -0.68
SSC4D-201ENST00000275560 DNAH11Q96DT5 4516 aa10.77□□□□□ -0.68
SSC4D-201ENST00000275560 A0A1B0GU69 56 aa10.76□□□□□ -0.69
SSC4D-201ENST00000275560 IGLV7-43P04211 117 aa10.76□□□□□ -0.69
SSC4D-201ENST00000275560 NUPR2A6NF83 97 aa10.75□□□□□ -0.69
SSC4D-201ENST00000275560 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
SSC4D-201ENST00000275560 IGKV2-30P06310 120 aa10.68□□□□□ -0.7
SSC4D-201ENST00000275560 FAM229AH3BQW9 127 aa10.68□□□□□ -0.7
SSC4D-201ENST00000275560 IGKV2D-30A0A075B6S6 120 aa10.67□□□□□ -0.7
SSC4D-201ENST00000275560 DNAH5Q8TE73 4624 aa10.67□□□□□ -0.7
SSC4D-201ENST00000275560 SPATA8Q6RVD6 105 aa10.63□□□□□ -0.71
SSC4D-201ENST00000275560 KRTAP13-2Q52LG2 175 aa10.62□□□□□ -0.71
SSC4D-201ENST00000275560 MIR22HGQ0VDD5 57 aa10.62□□□□□ -0.71
SSC4D-201ENST00000275560 SSBP3-AS1Q7Z2R9 100 aa10.62□□□□□ -0.71
SSC4D-201ENST00000275560 LRP1BQ9NZR2 4599 aa10.62□□□□□ -0.71
SSC4D-201ENST00000275560 KRTAP16-1A8MUX0 517 aa10.59□□□□□ -0.71
SSC4D-201ENST00000275560 PLA2G1BP04054 148 aaKnown RBP10.59□□□□□ -0.71
SSC4D-201ENST00000275560 UQCR11O14957 56 aa10.57□□□□□ -0.72
SSC4D-201ENST00000275560 SPINK1P00995 79 aa10.56□□□□□ -0.72
SSC4D-201ENST00000275560 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
SSC4D-201ENST00000275560 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
SSC4D-201ENST00000275560 VPS13BQ7Z7G8 4022 aa10.5□□□□□ -0.73
SSC4D-201ENST00000275560 Q8N1X5 172 aa10.48□□□□□ -0.73
SSC4D-201ENST00000275560 LINC01554Q52M75 96 aa10.47□□□□□ -0.73
SSC4D-201ENST00000275560 LY6G6CO95867 125 aa10.45□□□□□ -0.74
SSC4D-201ENST00000275560 CSAG1Q6PB30 78 aa10.44□□□□□ -0.74
SSC4D-201ENST00000275560 FAT2Q9NYQ8 4349 aa10.43□□□□□ -0.74
SSC4D-201ENST00000275560 PKD1P98161 4303 aa10.4□□□□□ -0.74
SSC4D-201ENST00000275560 KRTAP1-4P0C5Y4 121 aa10.38□□□□□ -0.75
SSC4D-201ENST00000275560 HYDINQ4G0P3 5121 aa10.37□□□□□ -0.75
SSC4D-201ENST00000275560 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
SSC4D-201ENST00000275560 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
SSC4D-201ENST00000275560 TYMSOSQ8TAI1 123 aa10.27□□□□□ -0.77
SSC4D-201ENST00000275560 Q6ZSA8 131 aa10.26□□□□□ -0.77
SSC4D-201ENST00000275560 H0YAA0 97 aa10.25□□□□□ -0.77
SSC4D-201ENST00000275560 DNHD1Q96M86 4753 aa10.25□□□□□ -0.77
SSC4D-201ENST00000275560 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
SSC4D-201ENST00000275560 PKHD1P08F94 4074 aa10.2□□□□□ -0.78
SSC4D-201ENST00000275560 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
SSC4D-201ENST00000275560 A8MUU9 505 aa10.14□□□□□ -0.79
SSC4D-201ENST00000275560 KRTAP3-1Q9BYR8 98 aa10.13□□□□□ -0.79
SSC4D-201ENST00000275560 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
SSC4D-201ENST00000275560 H3BS24 57 aa10.09□□□□□ -0.79
SSC4D-201ENST00000275560 A0A1B0GU33 70 aa10.08□□□□□ -0.8
SSC4D-201ENST00000275560 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
SSC4D-201ENST00000275560 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
SSC4D-201ENST00000275560 FAT1Q14517 4588 aa10.01□□□□□ -0.81
SSC4D-201ENST00000275560 KRTAP25-1Q3LHN0 102 aa10.01□□□□□ -0.81
SSC4D-201ENST00000275560 SMR3BP02814 79 aaPredicted RBP9.99□□□□□ -0.81
SSC4D-201ENST00000275560 SACSQ9NZJ4 4579 aa9.97□□□□□ -0.81
SSC4D-201ENST00000275560 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
SSC4D-201ENST00000275560 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
SSC4D-201ENST00000275560 COX6B2Q6YFQ2 88 aa9.88□□□□□ -0.83
SSC4D-201ENST00000275560 PKHD1L1Q86WI1 4243 aa9.88□□□□□ -0.83
SSC4D-201ENST00000275560 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
SSC4D-201ENST00000275560 RPS29P62273 56 aaKnown RBP9.85□□□□□ -0.83
SSC4D-201ENST00000275560 ROMO1P60602 79 aa9.84□□□□□ -0.83
SSC4D-201ENST00000275560 APOBP04114 4563 aaKnown RBP9.81□□□□□ -0.84
SSC4D-201ENST00000275560 K7ERS5 55 aa9.75□□□□□ -0.85
SSC4D-201ENST00000275560 A0A0D9SG42 100 aa9.74□□□□□ -0.85
SSC4D-201ENST00000275560 KRTAP13-4Q3LI77 160 aa9.72□□□□□ -0.85
SSC4D-201ENST00000275560 HSPG2P98160 4391 aa9.71□□□□□ -0.85
SSC4D-201ENST00000275560 LRP1Q07954 4544 aaKnown RBP9.68□□□□□ -0.86
SSC4D-201ENST00000275560 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms