RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 TMEM258P61165 79 aa12.27□□□□□ -0.45
GFRA3-201ENST00000274721 C5orf47Q569G3 176 aa12.27□□□□□ -0.45
GFRA3-201ENST00000274721 C1orf195Q5TG92 126 aa12.26□□□□□ -0.45
GFRA3-201ENST00000274721 NOTCH2NLQ7Z3S9 236 aa12.25□□□□□ -0.45
GFRA3-201ENST00000274721 SPINK1P00995 79 aa12.24□□□□□ -0.45
GFRA3-201ENST00000274721 LIMD2Q9BT23 127 aa12.24□□□□□ -0.45
GFRA3-201ENST00000274721 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
GFRA3-201ENST00000274721 NDUFC1O43677 76 aa12.22□□□□□ -0.45
GFRA3-201ENST00000274721 ZCCHC13Q8WW36 166 aaKnown RBP12.19□□□□□ -0.46
GFRA3-201ENST00000274721 LINC00304Q8N9R0 145 aa12.18□□□□□ -0.46
GFRA3-201ENST00000274721 RPS29P62273 56 aaKnown RBP12.17□□□□□ -0.46
GFRA3-201ENST00000274721 MRPL34Q9BQ48 92 aaKnown RBP12.17□□□□□ -0.46
GFRA3-201ENST00000274721 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
GFRA3-201ENST00000274721 C8orf87E5RJ46 101 aa12.15□□□□□ -0.47
GFRA3-201ENST00000274721 FAM229AH3BQW9 127 aa12.15□□□□□ -0.47
GFRA3-201ENST00000274721 TP53AIP1Q9HCN2 124 aa12.14□□□□□ -0.47
GFRA3-201ENST00000274721 HSPG2P98160 4391 aa12.14□□□□□ -0.47
GFRA3-201ENST00000274721 MP68P56378 58 aa12.13□□□□□ -0.47
GFRA3-201ENST00000274721 PKHD1L1Q86WI1 4243 aa12.12□□□□□ -0.47
GFRA3-201ENST00000274721 H0Y9P7 68 aa12.1□□□□□ -0.47
GFRA3-201ENST00000274721 H3BPC8 53 aa12.09□□□□□ -0.47
GFRA3-201ENST00000274721 LINC00313P59037 77 aa12.08□□□□□ -0.48
GFRA3-201ENST00000274721 TRAV22A0A0B4J277 110 aa12.08□□□□□ -0.48
GFRA3-201ENST00000274721 FAM236DA0A1B0GTK5 79 aa12.08□□□□□ -0.48
GFRA3-201ENST00000274721 FAM236CP0DP71 79 aa12.08□□□□□ -0.48
GFRA3-201ENST00000274721 Q5VSD8 79 aa12.06□□□□□ -0.48
GFRA3-201ENST00000274721 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
GFRA3-201ENST00000274721 NDUFS5O43920 106 aa12.05□□□□□ -0.48
GFRA3-201ENST00000274721 RYR1P21817 5038 aa12.04□□□□□ -0.48
GFRA3-201ENST00000274721 RPS28P62857 69 aaKnown RBP12.01□□□□□ -0.49
GFRA3-201ENST00000274721 KRTAP17-1Q9BYP8 105 aa12□□□□□ -0.49
GFRA3-201ENST00000274721 C1orf64Q8NEQ6 169 aa11.99□□□□□ -0.49
GFRA3-201ENST00000274721 KRTAP16-1A8MUX0 517 aa11.99□□□□□ -0.49
GFRA3-201ENST00000274721 Q8N9P0 234 aaPredicted RBP11.99□□□□□ -0.49
GFRA3-201ENST00000274721 ATP5EP56381 51 aaPredicted RBP11.98□□□□□ -0.49
GFRA3-201ENST00000274721 KRTAP13-3Q3SY46 172 aa11.94□□□□□ -0.5
GFRA3-201ENST00000274721 KRTAP10-8P60410 259 aa11.93□□□□□ -0.5
GFRA3-201ENST00000274721 Q5W150 140 aa11.93□□□□□ -0.5
GFRA3-201ENST00000274721 KIAA1109Q2LD37 5005 aa11.92□□□□□ -0.5
GFRA3-201ENST00000274721 FLG2Q5D862 2391 aaPredicted RBP11.9□□□□□ -0.5
GFRA3-201ENST00000274721 LRP1Q07954 4544 aaKnown RBP11.9□□□□□ -0.51
GFRA3-201ENST00000274721 TNXBP22105 4242 aa11.89□□□□□ -0.51
GFRA3-201ENST00000274721 Q8N1X5 172 aa11.88□□□□□ -0.51
GFRA3-201ENST00000274721 SERP1Q9Y6X1 66 aa11.88□□□□□ -0.51
GFRA3-201ENST00000274721 OXTP01178 125 aa11.87□□□□□ -0.51
GFRA3-201ENST00000274721 EPPK1P58107 5090 aaKnown RBP11.87□□□□□ -0.51
GFRA3-201ENST00000274721 SPANXA2-OT1Q8N9U9 137 aa11.83□□□□□ -0.52
GFRA3-201ENST00000274721 CYP4F30PQ9H0H9 118 aa11.81□□□□□ -0.52
GFRA3-201ENST00000274721 LOC101927531A0A1B0GV80 90 aa11.81□□□□□ -0.52
GFRA3-201ENST00000274721 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
GFRA3-201ENST00000274721 FAT3Q8TDW7 4589 aa11.76□□□□□ -0.53
GFRA3-201ENST00000274721 PCOTHQ58A44 107 aa11.76□□□□□ -0.53
GFRA3-201ENST00000274721 PRR4Q16378 134 aa11.75□□□□□ -0.53
GFRA3-201ENST00000274721 IGLV7-46A0A075B6I9 117 aa11.74□□□□□ -0.53
GFRA3-201ENST00000274721 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
GFRA3-201ENST00000274721 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
GFRA3-201ENST00000274721 C9orf92A6NGG3 77 aa11.69□□□□□ -0.54
GFRA3-201ENST00000274721 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
GFRA3-201ENST00000274721 C20orf166-AS1Q96NR2 134 aa11.67□□□□□ -0.54
GFRA3-201ENST00000274721 A8MUU9 505 aa11.66□□□□□ -0.54
GFRA3-201ENST00000274721 MYCBP2O75592 4640 aa11.65□□□□□ -0.54
GFRA3-201ENST00000274721 SMIM26A0A096LP01 95 aa11.61□□□□□ -0.55
GFRA3-201ENST00000274721 FP248Q71RG6 208 aaPredicted RBP11.61□□□□□ -0.55
GFRA3-201ENST00000274721 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
GFRA3-201ENST00000274721 HRES1P13985 223 aa11.55□□□□□ -0.56
GFRA3-201ENST00000274721 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
GFRA3-201ENST00000274721 Q75L30 129 aa11.52□□□□□ -0.57
GFRA3-201ENST00000274721 COA5Q86WW8 74 aa11.47□□□□□ -0.57
GFRA3-201ENST00000274721 C7orf65Q6ZTY9 151 aa11.47□□□□□ -0.57
GFRA3-201ENST00000274721 DMAC1Q96GE9 116 aa11.43□□□□□ -0.58
GFRA3-201ENST00000274721 C4orf26Q17RF5 130 aa11.4□□□□□ -0.58
GFRA3-201ENST00000274721 ACYP2P14621 99 aa11.38□□□□□ -0.59
GFRA3-201ENST00000274721 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
GFRA3-201ENST00000274721 XP32Q5T750 250 aa11.36□□□□□ -0.59
GFRA3-201ENST00000274721 Q1T7F1 81 aa11.35□□□□□ -0.59
GFRA3-201ENST00000274721 RPL37P61927 97 aaKnown RBP11.34□□□□□ -0.59
GFRA3-201ENST00000274721 SPINK7P58062 85 aa11.31□□□□□ -0.6
GFRA3-201ENST00000274721 ATP11AUNQ6ZP68 121 aa11.3□□□□□ -0.6
GFRA3-201ENST00000274721 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
GFRA3-201ENST00000274721 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
GFRA3-201ENST00000274721 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
GFRA3-201ENST00000274721 V9GYY9 64 aa11.23□□□□□ -0.61
GFRA3-201ENST00000274721 HERC2O95714 4834 aa11.23□□□□□ -0.61
GFRA3-201ENST00000274721 A8MUN3 132 aa11.21□□□□□ -0.62
GFRA3-201ENST00000274721 CHKB-CPT1BH3BT56 60 aa11.16□□□□□ -0.62
GFRA3-201ENST00000274721 KRTAP3-1Q9BYR8 98 aa11.15□□□□□ -0.62
GFRA3-201ENST00000274721 J3QL48 77 aa11.13□□□□□ -0.63
GFRA3-201ENST00000274721 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
GFRA3-201ENST00000274721 PSPHP1O15172 72 aa11.11□□□□□ -0.63
GFRA3-201ENST00000274721 COX6B2Q6YFQ2 88 aa11.07□□□□□ -0.64
GFRA3-201ENST00000274721 LRP2P98164 4655 aa11.07□□□□□ -0.64
GFRA3-201ENST00000274721 Q5VV11 94 aa11.04□□□□□ -0.64
GFRA3-201ENST00000274721 LPAP08519 4548 aa11.04□□□□□ -0.64
GFRA3-201ENST00000274721 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
GFRA3-201ENST00000274721 SPTSSBQ8NFR3 76 aa10.87□□□□□ -0.67
GFRA3-201ENST00000274721 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
GFRA3-201ENST00000274721 A0A1B0GU69 56 aa10.82□□□□□ -0.68
GFRA3-201ENST00000274721 SEC61BP60468 96 aaKnown RBP10.82□□□□□ -0.68
GFRA3-201ENST00000274721 PCLOQ9Y6V0 5065 aa10.78□□□□□ -0.68
GFRA3-201ENST00000274721 PRO0628Q9UI54 55 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms