RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PANO1I0J062 215 aa9.78□□□□□ -0.84
MAP1LC3B-201ENST00000268607 LINC00472Q9H8W2 130 aa9.78□□□□□ -0.84
MAP1LC3B-201ENST00000268607 H0Y9J4 135 aa9.77□□□□□ -0.85
MAP1LC3B-201ENST00000268607 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
MAP1LC3B-201ENST00000268607 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
MAP1LC3B-201ENST00000268607 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
MAP1LC3B-201ENST00000268607 Q6ZR54 194 aa9.75□□□□□ -0.85
MAP1LC3B-201ENST00000268607 PRAC1Q96KF2 57 aa9.73□□□□□ -0.85
MAP1LC3B-201ENST00000268607 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
MAP1LC3B-201ENST00000268607 LINC00313P59037 77 aa9.71□□□□□ -0.85
MAP1LC3B-201ENST00000268607 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
MAP1LC3B-201ENST00000268607 A0A087WTM6 91 aa9.7□□□□□ -0.86
MAP1LC3B-201ENST00000268607 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
MAP1LC3B-201ENST00000268607 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
MAP1LC3B-201ENST00000268607 PKHD1P08F94 4074 aa9.68□□□□□ -0.86
MAP1LC3B-201ENST00000268607 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.68□□□□□ -0.86
MAP1LC3B-201ENST00000268607 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
MAP1LC3B-201ENST00000268607 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
MAP1LC3B-201ENST00000268607 HRES1P13985 223 aa9.66□□□□□ -0.86
MAP1LC3B-201ENST00000268607 RTL8CO15255 209 aa9.64□□□□□ -0.87
MAP1LC3B-201ENST00000268607 DNAH5Q8TE73 4624 aa9.64□□□□□ -0.87
MAP1LC3B-201ENST00000268607 SPRR1BP22528 89 aa9.64□□□□□ -0.87
MAP1LC3B-201ENST00000268607 KRTAP10-2P60368 255 aa9.63□□□□□ -0.87
MAP1LC3B-201ENST00000268607 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
MAP1LC3B-201ENST00000268607 PKD1P98161 4303 aa9.62□□□□□ -0.87
MAP1LC3B-201ENST00000268607 DNAH8Q96JB1 4490 aa9.59□□□□□ -0.87
MAP1LC3B-201ENST00000268607 H3BS24 57 aa9.59□□□□□ -0.88
MAP1LC3B-201ENST00000268607 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
MAP1LC3B-201ENST00000268607 TP53AIP1Q9HCN2 124 aa9.58□□□□□ -0.88
MAP1LC3B-201ENST00000268607 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
MAP1LC3B-201ENST00000268607 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
MAP1LC3B-201ENST00000268607 Q96NJ1 140 aa9.57□□□□□ -0.88
MAP1LC3B-201ENST00000268607 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
MAP1LC3B-201ENST00000268607 RYR3Q15413 4870 aa9.56□□□□□ -0.88
MAP1LC3B-201ENST00000268607 RYR2Q92736 4967 aa9.56□□□□□ -0.88
MAP1LC3B-201ENST00000268607 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
MAP1LC3B-201ENST00000268607 C8orf17Q9NRJ1 99 aa9.55□□□□□ -0.88
MAP1LC3B-201ENST00000268607 IGLV9-49A0A0B4J1Y8 123 aa9.54□□□□□ -0.88
MAP1LC3B-201ENST00000268607 IGHV6-1A0A0B4J1U7 121 aa9.53□□□□□ -0.88
MAP1LC3B-201ENST00000268607 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
MAP1LC3B-201ENST00000268607 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
MAP1LC3B-201ENST00000268607 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
MAP1LC3B-201ENST00000268607 ANAPC11Q9NYG5 84 aa9.49□□□□□ -0.89
MAP1LC3B-201ENST00000268607 PSORS1C2Q9UIG4 136 aa9.48□□□□□ -0.89
MAP1LC3B-201ENST00000268607 A0A087X002 238 aa9.47□□□□□ -0.89
MAP1LC3B-201ENST00000268607 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
MAP1LC3B-201ENST00000268607 A0A1B0GVX0 72 aa9.46□□□□□ -0.89
MAP1LC3B-201ENST00000268607 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
MAP1LC3B-201ENST00000268607 KRTAP10-1P60331 282 aa9.45□□□□□ -0.9
MAP1LC3B-201ENST00000268607 CDK2AP2O75956 126 aa9.42□□□□□ -0.9
MAP1LC3B-201ENST00000268607 CIRBP-AS1Q8TBR5 109 aa9.4□□□□□ -0.9
MAP1LC3B-201ENST00000268607 DYNC1H1Q14204 4646 aaKnown RBP9.39□□□□□ -0.91
MAP1LC3B-201ENST00000268607 Q5W150 140 aa9.38□□□□□ -0.91
MAP1LC3B-201ENST00000268607 VPS13BQ7Z7G8 4022 aa9.37□□□□□ -0.91
MAP1LC3B-201ENST00000268607 ZNF861PO60384 105 aa9.36□□□□□ -0.91
MAP1LC3B-201ENST00000268607 ACYP2P14621 99 aa9.34□□□□□ -0.91
MAP1LC3B-201ENST00000268607 FAT1Q14517 4588 aa9.34□□□□□ -0.91
MAP1LC3B-201ENST00000268607 A0A1B0GU69 56 aa9.34□□□□□ -0.91
MAP1LC3B-201ENST00000268607 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
MAP1LC3B-201ENST00000268607 CSAG1Q6PB30 78 aa9.33□□□□□ -0.92
MAP1LC3B-201ENST00000268607 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
MAP1LC3B-201ENST00000268607 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
MAP1LC3B-201ENST00000268607 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
MAP1LC3B-201ENST00000268607 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
MAP1LC3B-201ENST00000268607 ZNF706Q9Y5V0 76 aaPredicted RBP9.29□□□□□ -0.92
MAP1LC3B-201ENST00000268607 MIR22HGQ0VDD5 57 aa9.28□□□□□ -0.92
MAP1LC3B-201ENST00000268607 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
MAP1LC3B-201ENST00000268607 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
MAP1LC3B-201ENST00000268607 EPPK1P58107 5090 aaKnown RBP9.24□□□□□ -0.93
MAP1LC3B-201ENST00000268607 Q6ZSA8 131 aa9.24□□□□□ -0.93
MAP1LC3B-201ENST00000268607 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
MAP1LC3B-201ENST00000268607 UQCR11O14957 56 aa9.23□□□□□ -0.93
MAP1LC3B-201ENST00000268607 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
MAP1LC3B-201ENST00000268607 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
MAP1LC3B-201ENST00000268607 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
MAP1LC3B-201ENST00000268607 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
MAP1LC3B-201ENST00000268607 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
MAP1LC3B-201ENST00000268607 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
MAP1LC3B-201ENST00000268607 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
MAP1LC3B-201ENST00000268607 HSPG2P98160 4391 aa9.05□□□□□ -0.96
MAP1LC3B-201ENST00000268607 SSBP3-AS1Q7Z2R9 100 aa9.04□□□□□ -0.96
MAP1LC3B-201ENST00000268607 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
MAP1LC3B-201ENST00000268607 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
MAP1LC3B-201ENST00000268607 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
MAP1LC3B-201ENST00000268607 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
MAP1LC3B-201ENST00000268607 RYR1P21817 5038 aa8.98□□□□□ -0.97
MAP1LC3B-201ENST00000268607 MYCBP2O75592 4640 aa8.97□□□□□ -0.97
MAP1LC3B-201ENST00000268607 ROMO1P60602 79 aa8.96□□□□□ -0.97
MAP1LC3B-201ENST00000268607 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
MAP1LC3B-201ENST00000268607 SPINK1P00995 79 aa8.92□□□□□ -0.98
MAP1LC3B-201ENST00000268607 KRTAP10-4P60372 401 aaPredicted RBP8.92□□□□□ -0.98
MAP1LC3B-201ENST00000268607 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
MAP1LC3B-201ENST00000268607 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
MAP1LC3B-201ENST00000268607 A8MUU9 505 aa8.88□□□□□ -0.99
MAP1LC3B-201ENST00000268607 LINC00304Q8N9R0 145 aa8.86□□□□□ -0.99
MAP1LC3B-201ENST00000268607 DMBT1Q9UGM3 2413 aaPredicted RBP8.85□□□□□ -0.99
MAP1LC3B-201ENST00000268607 PKHD1L1Q86WI1 4243 aa8.85□□□□□ -0.99
MAP1LC3B-201ENST00000268607 Q5VSD8 79 aa8.85□□□□□ -0.99
MAP1LC3B-201ENST00000268607 H0YAA0 97 aa8.84□□□□□ -0.99
MAP1LC3B-201ENST00000268607 Q8N1X5 172 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 938.9 ms