RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 KRTAP29-1A8MX34 341 aaPredicted RBP3.54□□□□□ -1.84
SEMA3A-201ENST00000265362 LCE6AA0A183 80 aa3.54□□□□□ -1.84
SEMA3A-201ENST00000265362 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
SEMA3A-201ENST00000265362 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
SEMA3A-201ENST00000265362 SMR3BP02814 79 aaPredicted RBP3.53□□□□□ -1.84
SEMA3A-201ENST00000265362 COL7A1Q02388 2944 aa3.53□□□□□ -1.84
SEMA3A-201ENST00000265362 ZCCHC13Q8WW36 166 aaKnown RBP3.52□□□□□ -1.85
SEMA3A-201ENST00000265362 KRTAP13-1Q8IUC0 172 aa3.52□□□□□ -1.85
SEMA3A-201ENST00000265362 Q8N9P0 234 aaPredicted RBP3.52□□□□□ -1.85
SEMA3A-201ENST00000265362 HRES1P13985 223 aa3.52□□□□□ -1.85
SEMA3A-201ENST00000265362 CYSTM1Q9H1C7 97 aa3.51□□□□□ -1.85
SEMA3A-201ENST00000265362 CSMD2Q7Z408 3487 aa3.51□□□□□ -1.85
SEMA3A-201ENST00000265362 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
SEMA3A-201ENST00000265362 ZNF469Q96JG9 3925 aaPredicted RBP3.51□□□□□ -1.85
SEMA3A-201ENST00000265362 AKAP9Q99996 3911 aa3.5□□□□□ -1.85
SEMA3A-201ENST00000265362 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
SEMA3A-201ENST00000265362 FP248Q71RG6 208 aaPredicted RBP3.5□□□□□ -1.85
SEMA3A-201ENST00000265362 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
SEMA3A-201ENST00000265362 J3QL48 77 aa3.5□□□□□ -1.85
SEMA3A-201ENST00000265362 Q5W150 140 aa3.5□□□□□ -1.85
SEMA3A-201ENST00000265362 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
SEMA3A-201ENST00000265362 KRTAP10-1P60331 282 aa3.49□□□□□ -1.85
SEMA3A-201ENST00000265362 DMAC1Q96GE9 116 aa3.49□□□□□ -1.85
SEMA3A-201ENST00000265362 PANO1I0J062 215 aa3.48□□□□□ -1.85
SEMA3A-201ENST00000265362 KRTAP10-2P60368 255 aa3.48□□□□□ -1.85
SEMA3A-201ENST00000265362 LCA10Q71F78 164 aa3.47□□□□□ -1.85
SEMA3A-201ENST00000265362 FBN3Q75N90 2809 aa3.45□□□□□ -1.86
SEMA3A-201ENST00000265362 Q8N1X5 172 aa3.45□□□□□ -1.86
SEMA3A-201ENST00000265362 MEGF8Q7Z7M0 2845 aa3.44□□□□□ -1.86
SEMA3A-201ENST00000265362 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
SEMA3A-201ENST00000265362 A0A087X002 238 aa3.44□□□□□ -1.86
SEMA3A-201ENST00000265362 A0A1B0GU33 70 aa3.44□□□□□ -1.86
SEMA3A-201ENST00000265362 Q5VV11 94 aa3.44□□□□□ -1.86
SEMA3A-201ENST00000265362 Q6ZSA8 131 aa3.43□□□□□ -1.86
SEMA3A-201ENST00000265362 SPINK7P58062 85 aa3.43□□□□□ -1.86
SEMA3A-201ENST00000265362 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
SEMA3A-201ENST00000265362 OXTP01178 125 aa3.42□□□□□ -1.86
SEMA3A-201ENST00000265362 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
SEMA3A-201ENST00000265362 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.86
SEMA3A-201ENST00000265362 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.86
SEMA3A-201ENST00000265362 Q5VSD8 79 aa3.4□□□□□ -1.87
SEMA3A-201ENST00000265362 CSAG1Q6PB30 78 aa3.39□□□□□ -1.87
SEMA3A-201ENST00000265362 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
SEMA3A-201ENST00000265362 S4R3F8 94 aa3.37□□□□□ -1.87
SEMA3A-201ENST00000265362 KRTAP13-2Q52LG2 175 aa3.37□□□□□ -1.87
SEMA3A-201ENST00000265362 A8MUU9 505 aa3.34□□□□□ -1.87
SEMA3A-201ENST00000265362 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
SEMA3A-201ENST00000265362 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
SEMA3A-201ENST00000265362 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
SEMA3A-201ENST00000265362 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
SEMA3A-201ENST00000265362 H3BS24 57 aa3.3□□□□□ -1.88
SEMA3A-201ENST00000265362 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
SEMA3A-201ENST00000265362 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
SEMA3A-201ENST00000265362 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
SEMA3A-201ENST00000265362 KRTAP1-4P0C5Y4 121 aa3.29□□□□□ -1.88
SEMA3A-201ENST00000265362 A0A0D9SG42 100 aa3.29□□□□□ -1.88
SEMA3A-201ENST00000265362 R4GN34 69 aa3.27□□□□□ -1.89
SEMA3A-201ENST00000265362 M0QZ58 72 aa3.26□□□□□ -1.89
SEMA3A-201ENST00000265362 ROMO1P60602 79 aa3.24□□□□□ -1.89
SEMA3A-201ENST00000265362 CAMK2N1Q7Z7J9 78 aa3.24□□□□□ -1.89
SEMA3A-201ENST00000265362 A6NN06 94 aa3.21□□□□□ -1.9
SEMA3A-201ENST00000265362 KRTAP16-1A8MUX0 517 aa3.21□□□□□ -1.9
SEMA3A-201ENST00000265362 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SEMA3A-201ENST00000265362 CSMD3Q7Z407 3707 aa3.2□□□□□ -1.9
SEMA3A-201ENST00000265362 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
SEMA3A-201ENST00000265362 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
SEMA3A-201ENST00000265362 ADM2Q7Z4H4 148 aa3.19□□□□□ -1.9
SEMA3A-201ENST00000265362 M0R2T5 61 aa3.19□□□□□ -1.9
SEMA3A-201ENST00000265362 XP32Q5T750 250 aa3.15□□□□□ -1.9
SEMA3A-201ENST00000265362 A0A1B0GVY2 172 aa3.15□□□□□ -1.9
SEMA3A-201ENST00000265362 ANK2Q01484 3957 aa3.15□□□□□ -1.91
SEMA3A-201ENST00000265362 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
SEMA3A-201ENST00000265362 KRTAP10-8P60410 259 aa3.13□□□□□ -1.91
SEMA3A-201ENST00000265362 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
SEMA3A-201ENST00000265362 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
SEMA3A-201ENST00000265362 HUWE1Q7Z6Z7 4374 aaKnown RBP3.09□□□□□ -1.92
SEMA3A-201ENST00000265362 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
SEMA3A-201ENST00000265362 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
SEMA3A-201ENST00000265362 H0YAA0 97 aa3.06□□□□□ -1.92
SEMA3A-201ENST00000265362 A8MU10 97 aa3.06□□□□□ -1.92
SEMA3A-201ENST00000265362 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
SEMA3A-201ENST00000265362 CMYA5Q8N3K9 4069 aa3.05□□□□□ -1.92
SEMA3A-201ENST00000265362 HECTD4Q9Y4D8 3996 aa3.04□□□□□ -1.92
SEMA3A-201ENST00000265362 KMT2AQ03164 3969 aa3.02□□□□□ -1.93
SEMA3A-201ENST00000265362 LYSTQ99698 3801 aa3.02□□□□□ -1.93
SEMA3A-201ENST00000265362 TNP1P09430 55 aa3.01□□□□□ -1.93
SEMA3A-201ENST00000265362 PRKDCP78527 4128 aaKnown RBP3□□□□□ -1.93
SEMA3A-201ENST00000265362 ALMS1Q8TCU4 4167 aa2.99□□□□□ -1.93
SEMA3A-201ENST00000265362 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
SEMA3A-201ENST00000265362 DNAH9Q9NYC9 4486 aa2.97□□□□□ -1.93
SEMA3A-201ENST00000265362 DNAH1Q9P2D7 4330 aa2.95□□□□□ -1.94
SEMA3A-201ENST00000265362 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
SEMA3A-201ENST00000265362 P0C880 135 aa2.94□□□□□ -1.94
SEMA3A-201ENST00000265362 KRTAP10-4P60372 401 aaPredicted RBP2.93□□□□□ -1.94
SEMA3A-201ENST00000265362 KRTAP3-1Q9BYR8 98 aa2.92□□□□□ -1.94
SEMA3A-201ENST00000265362 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
SEMA3A-201ENST00000265362 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
SEMA3A-201ENST00000265362 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
SEMA3A-201ENST00000265362 MT1HL1P0DM35 61 aa2.88□□□□□ -1.95
SEMA3A-201ENST00000265362 FRAS1Q86XX4 4008 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms