RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SPENQ96T58 3664 aaKnown RBP9.08□□□□□ -0.96
CASC3-201ENST00000264645 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
CASC3-201ENST00000264645 A0A087X002 238 aa9.06□□□□□ -0.96
CASC3-201ENST00000264645 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
CASC3-201ENST00000264645 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
CASC3-201ENST00000264645 A0A1B0GU33 70 aa9.03□□□□□ -0.96
CASC3-201ENST00000264645 C9orf92A6NGG3 77 aa9.03□□□□□ -0.96
CASC3-201ENST00000264645 A0A0D9SG42 100 aa9.03□□□□□ -0.96
CASC3-201ENST00000264645 WWC2-AS2Q96NR7 200 aa9.03□□□□□ -0.96
CASC3-201ENST00000264645 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
CASC3-201ENST00000264645 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
CASC3-201ENST00000264645 PANO1I0J062 215 aa8.98□□□□□ -0.97
CASC3-201ENST00000264645 KMT2BQ9UMN6 2715 aaPredicted RBP8.96□□□□□ -0.98
CASC3-201ENST00000264645 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
CASC3-201ENST00000264645 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
CASC3-201ENST00000264645 ASB16-AS1Q495Z4 193 aa8.9□□□□□ -0.98
CASC3-201ENST00000264645 TENM3Q9P273 2699 aa8.86□□□□□ -0.99
CASC3-201ENST00000264645 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
CASC3-201ENST00000264645 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
CASC3-201ENST00000264645 PDZD2O15018 2839 aa8.83□□□□□ -1
CASC3-201ENST00000264645 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
CASC3-201ENST00000264645 VWFP04275 2813 aa8.76□□□□□ -1.01
CASC3-201ENST00000264645 KRTAP25-1Q3LHN0 102 aa8.7□□□□□ -1.02
CASC3-201ENST00000264645 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
CASC3-201ENST00000264645 KRTAP13-1Q8IUC0 172 aa8.69□□□□□ -1.02
CASC3-201ENST00000264645 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
CASC3-201ENST00000264645 TENM4Q6N022 2769 aa8.67□□□□□ -1.02
CASC3-201ENST00000264645 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
CASC3-201ENST00000264645 ROMO1P60602 79 aa8.65□□□□□ -1.02
CASC3-201ENST00000264645 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
CASC3-201ENST00000264645 TGP01266 2768 aa8.63□□□□□ -1.03
CASC3-201ENST00000264645 FBN1P35555 2871 aaKnown RBP8.61□□□□□ -1.03
CASC3-201ENST00000264645 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
CASC3-201ENST00000264645 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
CASC3-201ENST00000264645 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
CASC3-201ENST00000264645 LUZP6Q538Z0 58 aa8.51□□□□□ -1.05
CASC3-201ENST00000264645 CSMD2Q7Z408 3487 aa8.49□□□□□ -1.05
CASC3-201ENST00000264645 A8MUU9 505 aa8.49□□□□□ -1.05
CASC3-201ENST00000264645 NDUFAF8A1L188 74 aa8.48□□□□□ -1.05
CASC3-201ENST00000264645 KRTAP10-1P60331 282 aa8.46□□□□□ -1.05
CASC3-201ENST00000264645 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.06
CASC3-201ENST00000264645 Q6ZSA8 131 aa8.45□□□□□ -1.06
CASC3-201ENST00000264645 TENM2Q9NT68 2774 aa8.44□□□□□ -1.06
CASC3-201ENST00000264645 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
CASC3-201ENST00000264645 S4R3F8 94 aa8.42□□□□□ -1.06
CASC3-201ENST00000264645 ZFHX3Q15911 3703 aa8.41□□□□□ -1.06
CASC3-201ENST00000264645 BSNQ9UPA5 3926 aa8.39□□□□□ -1.07
CASC3-201ENST00000264645 KRTAP16-1A8MUX0 517 aa8.38□□□□□ -1.07
CASC3-201ENST00000264645 H0YAA0 97 aa8.37□□□□□ -1.07
CASC3-201ENST00000264645 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
CASC3-201ENST00000264645 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
CASC3-201ENST00000264645 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
CASC3-201ENST00000264645 A0A0A0MQY5 61 aa8.27□□□□□ -1.09
CASC3-201ENST00000264645 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
CASC3-201ENST00000264645 C10orf95Q9H7T3 257 aa8.25□□□□□ -1.09
CASC3-201ENST00000264645 R4GN34 69 aa8.24□□□□□ -1.09
CASC3-201ENST00000264645 NBPF19A0A087WUL8 3843 aa8.21□□□□□ -1.1
CASC3-201ENST00000264645 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
CASC3-201ENST00000264645 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
CASC3-201ENST00000264645 M0QZ58 72 aa8.17□□□□□ -1.1
CASC3-201ENST00000264645 TRRAPQ9Y4A5 3859 aa8.11□□□□□ -1.11
CASC3-201ENST00000264645 COL7A1Q02388 2944 aa8.11□□□□□ -1.11
CASC3-201ENST00000264645 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CASC3-201ENST00000264645 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
CASC3-201ENST00000264645 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.12
CASC3-201ENST00000264645 J3QL48 77 aa7.93□□□□□ -1.14
CASC3-201ENST00000264645 P0C880 135 aa7.89□□□□□ -1.15
CASC3-201ENST00000264645 Q5VSD8 79 aa7.87□□□□□ -1.15
CASC3-201ENST00000264645 CSMD3Q7Z407 3707 aa7.86□□□□□ -1.15
CASC3-201ENST00000264645 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
CASC3-201ENST00000264645 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
CASC3-201ENST00000264645 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
CASC3-201ENST00000264645 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
CASC3-201ENST00000264645 AKAP9Q99996 3911 aa7.76□□□□□ -1.17
CASC3-201ENST00000264645 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
CASC3-201ENST00000264645 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.17
CASC3-201ENST00000264645 KRTAP12-2P59991 146 aa7.7□□□□□ -1.18
CASC3-201ENST00000264645 ZNF469Q96JG9 3925 aaPredicted RBP7.69□□□□□ -1.18
CASC3-201ENST00000264645 XP32Q5T750 250 aa7.67□□□□□ -1.18
CASC3-201ENST00000264645 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
CASC3-201ENST00000264645 M0R2T5 61 aa7.59□□□□□ -1.19
CASC3-201ENST00000264645 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
CASC3-201ENST00000264645 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
CASC3-201ENST00000264645 TNP1P09430 55 aa7.53□□□□□ -1.2
CASC3-201ENST00000264645 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
CASC3-201ENST00000264645 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
CASC3-201ENST00000264645 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
CASC3-201ENST00000264645 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
CASC3-201ENST00000264645 HUWE1Q7Z6Z7 4374 aaKnown RBP7.27□□□□□ -1.25
CASC3-201ENST00000264645 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
CASC3-201ENST00000264645 A0A1B0GVY2 172 aa7.23□□□□□ -1.25
CASC3-201ENST00000264645 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
CASC3-201ENST00000264645 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
CASC3-201ENST00000264645 DNAH11Q96DT5 4516 aa7□□□□□ -1.29
CASC3-201ENST00000264645 DNAH1Q9P2D7 4330 aa6.95□□□□□ -1.3
CASC3-201ENST00000264645 ALMS1Q8TCU4 4167 aa6.94□□□□□ -1.3
CASC3-201ENST00000264645 ANK2Q01484 3957 aa6.92□□□□□ -1.3
CASC3-201ENST00000264645 DNAH8Q96JB1 4490 aa6.9□□□□□ -1.3
CASC3-201ENST00000264645 DNAH9Q9NYC9 4486 aa6.89□□□□□ -1.31
CASC3-201ENST00000264645 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms