RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FAM240AA0A1B0GVK7 77 aa5.54□□□□□ -1.52
SNRNP40-201ENST00000263694 K7ERU9 68 aa5.54□□□□□ -1.52
SNRNP40-201ENST00000263694 NREPQ16612 68 aa5.54□□□□□ -1.52
SNRNP40-201ENST00000263694 Q6ZVQ6 151 aa5.54□□□□□ -1.52
SNRNP40-201ENST00000263694 A0A1B0GW54 56 aa5.53□□□□□ -1.52
SNRNP40-201ENST00000263694 C21orf62-AS1Q17RA5 79 aa5.53□□□□□ -1.52
SNRNP40-201ENST00000263694 Q96NJ1 140 aa5.53□□□□□ -1.52
SNRNP40-201ENST00000263694 ACYP1P07311 99 aa5.52□□□□□ -1.53
SNRNP40-201ENST00000263694 C1orf195Q5TG92 126 aa5.52□□□□□ -1.53
SNRNP40-201ENST00000263694 LIMD2Q9BT23 127 aa5.52□□□□□ -1.53
SNRNP40-201ENST00000263694 SS18L2Q9UHA2 77 aa5.52□□□□□ -1.53
SNRNP40-201ENST00000263694 Q5XG85 94 aa5.51□□□□□ -1.53
SNRNP40-201ENST00000263694 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
SNRNP40-201ENST00000263694 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
SNRNP40-201ENST00000263694 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-201ENST00000263694 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
SNRNP40-201ENST00000263694 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
SNRNP40-201ENST00000263694 IGKV3D-7A0A0C4DH55 119 aa5.48□□□□□ -1.53
SNRNP40-201ENST00000263694 IGKV4-1P06312 121 aa5.48□□□□□ -1.53
SNRNP40-201ENST00000263694 BPY2O14599 106 aa5.46□□□□□ -1.53
SNRNP40-201ENST00000263694 Q8N9L7 120 aa5.46□□□□□ -1.53
SNRNP40-201ENST00000263694 SIGMAR1Q99720 223 aa5.46□□□□□ -1.53
SNRNP40-201ENST00000263694 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.53
SNRNP40-201ENST00000263694 DSCR10P59022 87 aa5.46□□□□□ -1.54
SNRNP40-201ENST00000263694 LINC00643Q86TS7 51 aa5.45□□□□□ -1.54
SNRNP40-201ENST00000263694 J3KT08 172 aa5.42□□□□□ -1.54
SNRNP40-201ENST00000263694 K7EQZ3 153 aa5.42□□□□□ -1.54
SNRNP40-201ENST00000263694 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
SNRNP40-201ENST00000263694 PRR4Q16378 134 aa5.42□□□□□ -1.54
SNRNP40-201ENST00000263694 IGHV6-1A0A0B4J1U7 121 aa5.42□□□□□ -1.54
SNRNP40-201ENST00000263694 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
SNRNP40-201ENST00000263694 A8MWP4 228 aa5.41□□□□□ -1.54
SNRNP40-201ENST00000263694 CXCL6P80162 114 aa5.41□□□□□ -1.54
SNRNP40-201ENST00000263694 IGLV7-46A0A075B6I9 117 aa5.4□□□□□ -1.55
SNRNP40-201ENST00000263694 C9orf92A6NGG3 77 aa5.4□□□□□ -1.55
SNRNP40-201ENST00000263694 PRR15Q8IV56 129 aa5.4□□□□□ -1.55
SNRNP40-201ENST00000263694 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
SNRNP40-201ENST00000263694 NDUFB1O75438 58 aa5.38□□□□□ -1.55
SNRNP40-201ENST00000263694 HIST1H4AP62805 103 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-201ENST00000263694 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
SNRNP40-201ENST00000263694 A0A087WVE0 104 aa5.38□□□□□ -1.55
SNRNP40-201ENST00000263694 FP248Q71RG6 208 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-201ENST00000263694 HERC1Q15751 4861 aa5.37□□□□□ -1.55
SNRNP40-201ENST00000263694 C8orf17Q9NRJ1 99 aa5.36□□□□□ -1.55
SNRNP40-201ENST00000263694 MMP24-AS1A0A0U1RRL7 71 aa5.35□□□□□ -1.55
SNRNP40-201ENST00000263694 LINC00313P59037 77 aa5.35□□□□□ -1.55
SNRNP40-201ENST00000263694 WFDC13Q8IUB5 93 aa5.35□□□□□ -1.55
SNRNP40-201ENST00000263694 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
SNRNP40-201ENST00000263694 LPAP08519 4548 aa5.33□□□□□ -1.56
SNRNP40-201ENST00000263694 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
SNRNP40-201ENST00000263694 HCG22E2RYF7 251 aa5.31□□□□□ -1.56
SNRNP40-201ENST00000263694 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
SNRNP40-201ENST00000263694 CASC2Q6XLA1 102 aa5.31□□□□□ -1.56
SNRNP40-201ENST00000263694 hDV103S1A0JD37 113 aa5.3□□□□□ -1.56
SNRNP40-201ENST00000263694 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
SNRNP40-201ENST00000263694 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
SNRNP40-201ENST00000263694 TMEM254Q8TBM7 123 aa5.27□□□□□ -1.57
SNRNP40-201ENST00000263694 MRPL34Q9BQ48 92 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-201ENST00000263694 FAM236AA0A1B0GUQ0 79 aa5.25□□□□□ -1.57
SNRNP40-201ENST00000263694 FAM236BA0A1B0GV22 79 aa5.25□□□□□ -1.57
SNRNP40-201ENST00000263694 NDUFS5O43920 106 aa5.25□□□□□ -1.57
SNRNP40-201ENST00000263694 LRP2P98164 4655 aa5.25□□□□□ -1.57
SNRNP40-201ENST00000263694 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
SNRNP40-201ENST00000263694 A8MUU9 505 aa5.24□□□□□ -1.57
SNRNP40-201ENST00000263694 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
SNRNP40-201ENST00000263694 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-201ENST00000263694 SCGB1A1P11684 91 aa5.21□□□□□ -1.57
SNRNP40-201ENST00000263694 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-201ENST00000263694 Q75L30 129 aa5.21□□□□□ -1.58
SNRNP40-201ENST00000263694 Q5W150 140 aa5.2□□□□□ -1.58
SNRNP40-201ENST00000263694 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
SNRNP40-201ENST00000263694 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
SNRNP40-201ENST00000263694 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-201ENST00000263694 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
SNRNP40-201ENST00000263694 ATOX1O00244 68 aa5.15□□□□□ -1.59
SNRNP40-201ENST00000263694 TP53AIP1Q9HCN2 124 aa5.15□□□□□ -1.59
SNRNP40-201ENST00000263694 H3BS24 57 aa5.13□□□□□ -1.59
SNRNP40-201ENST00000263694 UQCRQO14949 82 aa5.13□□□□□ -1.59
SNRNP40-201ENST00000263694 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
SNRNP40-201ENST00000263694 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
SNRNP40-201ENST00000263694 TRAV22A0A0B4J277 110 aa5.11□□□□□ -1.59
SNRNP40-201ENST00000263694 H0Y9P7 68 aa5.11□□□□□ -1.59
SNRNP40-201ENST00000263694 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-201ENST00000263694 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
SNRNP40-201ENST00000263694 SMIM20Q8N5G0 67 aa5.1□□□□□ -1.59
SNRNP40-201ENST00000263694 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
SNRNP40-201ENST00000263694 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 PCP4P48539 62 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 C5orf47Q569G3 176 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 LINC00208Q96KT6 92 aa5.08□□□□□ -1.6
SNRNP40-201ENST00000263694 MP68P56378 58 aa5.06□□□□□ -1.6
SNRNP40-201ENST00000263694 SPINK7P58062 85 aa5.06□□□□□ -1.6
SNRNP40-201ENST00000263694 C1orf64Q8NEQ6 169 aa5.06□□□□□ -1.6
SNRNP40-201ENST00000263694 COX7CP15954 63 aa5.05□□□□□ -1.6
SNRNP40-201ENST00000263694 SNURFQ9Y675 71 aa5.05□□□□□ -1.6
SNRNP40-201ENST00000263694 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
SNRNP40-201ENST00000263694 CYP4F30PQ9H0H9 118 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms