RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 Q6ZR54 194 aa10.71□□□□□ -0.69
TRAF4-201ENST00000262395 MRPL34Q9BQ48 92 aaKnown RBP10.71□□□□□ -0.69
TRAF4-201ENST00000262395 HRES1P13985 223 aa10.7□□□□□ -0.7
TRAF4-201ENST00000262395 SPINK7P58062 85 aa10.68□□□□□ -0.7
TRAF4-201ENST00000262395 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
TRAF4-201ENST00000262395 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
TRAF4-201ENST00000262395 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
TRAF4-201ENST00000262395 Q5W150 140 aa10.65□□□□□ -0.7
TRAF4-201ENST00000262395 TGP01266 2768 aa10.64□□□□□ -0.71
TRAF4-201ENST00000262395 A0A087WTM6 91 aa10.64□□□□□ -0.71
TRAF4-201ENST00000262395 IGLV5-52A0A0A0MRZ9 124 aa10.64□□□□□ -0.71
TRAF4-201ENST00000262395 PRR26Q8N8Z3 221 aa10.64□□□□□ -0.71
TRAF4-201ENST00000262395 DYNC2H1Q8NCM8 4307 aaKnown RBP10.63□□□□□ -0.71
TRAF4-201ENST00000262395 RTL8CO15255 209 aa10.63□□□□□ -0.71
TRAF4-201ENST00000262395 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
TRAF4-201ENST00000262395 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
TRAF4-201ENST00000262395 CIRBP-AS1Q8TBR5 109 aa10.62□□□□□ -0.71
TRAF4-201ENST00000262395 STARD9Q9P2P6 4700 aa10.62□□□□□ -0.71
TRAF4-201ENST00000262395 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
TRAF4-201ENST00000262395 ZNF861PO60384 105 aa10.61□□□□□ -0.71
TRAF4-201ENST00000262395 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
TRAF4-201ENST00000262395 KMT2AQ03164 3969 aa10.58□□□□□ -0.72
TRAF4-201ENST00000262395 NUPR2A6NF83 97 aa10.57□□□□□ -0.72
TRAF4-201ENST00000262395 MEGF8Q7Z7M0 2845 aa10.56□□□□□ -0.72
TRAF4-201ENST00000262395 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
TRAF4-201ENST00000262395 FBN3Q75N90 2809 aa10.55□□□□□ -0.72
TRAF4-201ENST00000262395 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
TRAF4-201ENST00000262395 PRAC1Q96KF2 57 aa10.54□□□□□ -0.72
TRAF4-201ENST00000262395 VPS13DQ5THJ4 4388 aa10.51□□□□□ -0.73
TRAF4-201ENST00000262395 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
TRAF4-201ENST00000262395 LINC00313P59037 77 aa10.49□□□□□ -0.73
TRAF4-201ENST00000262395 KRTAP13-3Q3SY46 172 aa10.47□□□□□ -0.73
TRAF4-201ENST00000262395 IGLV7-43P04211 117 aa10.46□□□□□ -0.73
TRAF4-201ENST00000262395 ADM2Q7Z4H4 148 aa10.46□□□□□ -0.74
TRAF4-201ENST00000262395 C8orf87E5RJ46 101 aa10.45□□□□□ -0.74
TRAF4-201ENST00000262395 PRKDCP78527 4128 aaKnown RBP10.43□□□□□ -0.74
TRAF4-201ENST00000262395 ACYP2P14621 99 aa10.41□□□□□ -0.74
TRAF4-201ENST00000262395 DNAH6Q9C0G6 4158 aa10.4□□□□□ -0.74
TRAF4-201ENST00000262395 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
TRAF4-201ENST00000262395 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
TRAF4-201ENST00000262395 C1orf134Q5TEV5 83 aa10.34□□□□□ -0.75
TRAF4-201ENST00000262395 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
TRAF4-201ENST00000262395 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
TRAF4-201ENST00000262395 LY6G6CO95867 125 aa10.3□□□□□ -0.76
TRAF4-201ENST00000262395 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
TRAF4-201ENST00000262395 KRTAP10-2P60368 255 aa10.29□□□□□ -0.76
TRAF4-201ENST00000262395 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
TRAF4-201ENST00000262395 IGKV2D-30A0A075B6S6 120 aa10.28□□□□□ -0.76
TRAF4-201ENST00000262395 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
TRAF4-201ENST00000262395 IGKV2-30P06310 120 aa10.28□□□□□ -0.76
TRAF4-201ENST00000262395 A0A1B0GU69 56 aa10.28□□□□□ -0.76
TRAF4-201ENST00000262395 LINC01554Q52M75 96 aa10.26□□□□□ -0.77
TRAF4-201ENST00000262395 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
TRAF4-201ENST00000262395 DNHD1Q96M86 4753 aa10.21□□□□□ -0.77
TRAF4-201ENST00000262395 DNAH5Q8TE73 4624 aa10.2□□□□□ -0.78
TRAF4-201ENST00000262395 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
TRAF4-201ENST00000262395 KRTAP16-1A8MUX0 517 aa10.18□□□□□ -0.78
TRAF4-201ENST00000262395 H3BS24 57 aa10.16□□□□□ -0.78
TRAF4-201ENST00000262395 SPINK1P00995 79 aa10.15□□□□□ -0.78
TRAF4-201ENST00000262395 MIR22HGQ0VDD5 57 aa10.15□□□□□ -0.78
TRAF4-201ENST00000262395 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
TRAF4-201ENST00000262395 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
TRAF4-201ENST00000262395 UQCR11O14957 56 aa10.1□□□□□ -0.79
TRAF4-201ENST00000262395 CSAG1Q6PB30 78 aa10.1□□□□□ -0.79
TRAF4-201ENST00000262395 Q8N1X5 172 aa10.09□□□□□ -0.79
TRAF4-201ENST00000262395 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
TRAF4-201ENST00000262395 VPS13BQ7Z7G8 4022 aa10.05□□□□□ -0.8
TRAF4-201ENST00000262395 HYDINQ4G0P3 5121 aa10.02□□□□□ -0.81
TRAF4-201ENST00000262395 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
TRAF4-201ENST00000262395 PKD1P98161 4303 aa9.99□□□□□ -0.81
TRAF4-201ENST00000262395 Q6ZSA8 131 aa9.97□□□□□ -0.81
TRAF4-201ENST00000262395 FAT2Q9NYQ8 4349 aa9.97□□□□□ -0.81
TRAF4-201ENST00000262395 C9orf92A6NGG3 77 aa9.89□□□□□ -0.83
TRAF4-201ENST00000262395 KRTAP21-3Q3LHN1 58 aa9.85□□□□□ -0.83
TRAF4-201ENST00000262395 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-201ENST00000262395 PKHD1P08F94 4074 aa9.83□□□□□ -0.84
TRAF4-201ENST00000262395 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
TRAF4-201ENST00000262395 SMR3BP02814 79 aaPredicted RBP9.82□□□□□ -0.84
TRAF4-201ENST00000262395 H0YAA0 97 aa9.75□□□□□ -0.85
TRAF4-201ENST00000262395 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
TRAF4-201ENST00000262395 FAT1Q14517 4588 aa9.66□□□□□ -0.86
TRAF4-201ENST00000262395 CRIPTQ9P021 101 aa9.66□□□□□ -0.86
TRAF4-201ENST00000262395 A0A1B0GU33 70 aa9.65□□□□□ -0.86
TRAF4-201ENST00000262395 KRTAP25-1Q3LHN0 102 aa9.65□□□□□ -0.87
TRAF4-201ENST00000262395 A8MUU9 505 aa9.64□□□□□ -0.87
TRAF4-201ENST00000262395 ROMO1P60602 79 aa9.61□□□□□ -0.87
TRAF4-201ENST00000262395 C20orf166-AS1Q96NR2 134 aa9.6□□□□□ -0.87
TRAF4-201ENST00000262395 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
TRAF4-201ENST00000262395 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
TRAF4-201ENST00000262395 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
TRAF4-201ENST00000262395 DYNC1H1Q14204 4646 aaKnown RBP9.56□□□□□ -0.88
TRAF4-201ENST00000262395 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
TRAF4-201ENST00000262395 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
TRAF4-201ENST00000262395 PKHD1L1Q86WI1 4243 aa9.43□□□□□ -0.9
TRAF4-201ENST00000262395 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
TRAF4-201ENST00000262395 APOBP04114 4563 aaKnown RBP9.39□□□□□ -0.91
TRAF4-201ENST00000262395 K7ERS5 55 aa9.37□□□□□ -0.91
TRAF4-201ENST00000262395 P0C880 135 aa9.37□□□□□ -0.91
TRAF4-201ENST00000262395 A0A0D9SG42 100 aa9.35□□□□□ -0.91
TRAF4-201ENST00000262395 LRP1Q07954 4544 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms