RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SACSQ9NZJ4 4579 aa8.16□□□□□ -1.1
VMP1-201ENST00000262291 IGLV7-43P04211 117 aa8.16□□□□□ -1.1
VMP1-201ENST00000262291 A6NED7 52 aa8.15□□□□□ -1.1
VMP1-201ENST00000262291 LRP1BQ9NZR2 4599 aa8.15□□□□□ -1.11
VMP1-201ENST00000262291 A0A1B0GW54 56 aa8.14□□□□□ -1.11
VMP1-201ENST00000262291 MP68P56378 58 aa8.14□□□□□ -1.11
VMP1-201ENST00000262291 NDUFB1O75438 58 aa8.13□□□□□ -1.11
VMP1-201ENST00000262291 PKHD1P08F94 4074 aa8.12□□□□□ -1.11
VMP1-201ENST00000262291 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
VMP1-201ENST00000262291 ZNF706Q9Y5V0 76 aaPredicted RBP8.1□□□□□ -1.11
VMP1-201ENST00000262291 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
VMP1-201ENST00000262291 Q6ZSA8 131 aa8.09□□□□□ -1.12
VMP1-201ENST00000262291 H0Y9P7 68 aa8.08□□□□□ -1.12
VMP1-201ENST00000262291 A6NN06 94 aa8.07□□□□□ -1.12
VMP1-201ENST00000262291 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
VMP1-201ENST00000262291 LINC00472Q9H8W2 130 aa8.06□□□□□ -1.12
VMP1-201ENST00000262291 COA5Q86WW8 74 aa8.03□□□□□ -1.12
VMP1-201ENST00000262291 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
VMP1-201ENST00000262291 Q75L30 129 aa8.03□□□□□ -1.12
VMP1-201ENST00000262291 A0A087X002 238 aa8.02□□□□□ -1.13
VMP1-201ENST00000262291 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
VMP1-201ENST00000262291 NDUFS5O43920 106 aa8.01□□□□□ -1.13
VMP1-201ENST00000262291 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
VMP1-201ENST00000262291 Q96NJ1 140 aa8.01□□□□□ -1.13
VMP1-201ENST00000262291 KMT2CQ8NEZ4 4911 aaKnown RBP8□□□□□ -1.13
VMP1-201ENST00000262291 SPANXA2-OT1Q8N9U9 137 aa8□□□□□ -1.13
VMP1-201ENST00000262291 PCOTHQ58A44 107 aa8□□□□□ -1.13
VMP1-201ENST00000262291 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
VMP1-201ENST00000262291 CASC2Q6XLA1 102 aa8□□□□□ -1.13
VMP1-201ENST00000262291 A8MWP4 228 aa7.99□□□□□ -1.13
VMP1-201ENST00000262291 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
VMP1-201ENST00000262291 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
VMP1-201ENST00000262291 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
VMP1-201ENST00000262291 DYNC1H1Q14204 4646 aaKnown RBP7.98□□□□□ -1.13
VMP1-201ENST00000262291 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
VMP1-201ENST00000262291 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
VMP1-201ENST00000262291 SPINK7P58062 85 aa7.96□□□□□ -1.14
VMP1-201ENST00000262291 IGHV6-1A0A0B4J1U7 121 aa7.95□□□□□ -1.14
VMP1-201ENST00000262291 RYR2Q92736 4967 aa7.95□□□□□ -1.14
VMP1-201ENST00000262291 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
VMP1-201ENST00000262291 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
VMP1-201ENST00000262291 NOTCH2NLQ7Z3S9 236 aa7.93□□□□□ -1.14
VMP1-201ENST00000262291 C8orf87E5RJ46 101 aa7.92□□□□□ -1.14
VMP1-201ENST00000262291 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
VMP1-201ENST00000262291 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
VMP1-201ENST00000262291 A0A1B0GVY2 172 aa7.91□□□□□ -1.14
VMP1-201ENST00000262291 FAT1Q14517 4588 aa7.9□□□□□ -1.15
VMP1-201ENST00000262291 CDK2AP2O75956 126 aa7.89□□□□□ -1.15
VMP1-201ENST00000262291 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
VMP1-201ENST00000262291 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
VMP1-201ENST00000262291 H3BPC8 53 aa7.88□□□□□ -1.15
VMP1-201ENST00000262291 SSBP3-AS1Q7Z2R9 100 aa7.88□□□□□ -1.15
VMP1-201ENST00000262291 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
VMP1-201ENST00000262291 C8orf17Q9NRJ1 99 aa7.87□□□□□ -1.15
VMP1-201ENST00000262291 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
VMP1-201ENST00000262291 LINC00313P59037 77 aa7.87□□□□□ -1.15
VMP1-201ENST00000262291 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
VMP1-201ENST00000262291 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
VMP1-201ENST00000262291 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
VMP1-201ENST00000262291 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
VMP1-201ENST00000262291 HRES1P13985 223 aa7.81□□□□□ -1.16
VMP1-201ENST00000262291 H3BS24 57 aa7.79□□□□□ -1.16
VMP1-201ENST00000262291 RYR3Q15413 4870 aa7.78□□□□□ -1.16
VMP1-201ENST00000262291 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
VMP1-201ENST00000262291 MRPL34Q9BQ48 92 aaKnown RBP7.76□□□□□ -1.17
VMP1-201ENST00000262291 KRTAP10-4P60372 401 aaPredicted RBP7.74□□□□□ -1.17
VMP1-201ENST00000262291 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
VMP1-201ENST00000262291 LINC01554Q52M75 96 aa7.71□□□□□ -1.18
VMP1-201ENST00000262291 LINC00304Q8N9R0 145 aa7.7□□□□□ -1.18
VMP1-201ENST00000262291 Q5W150 140 aa7.69□□□□□ -1.18
VMP1-201ENST00000262291 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
VMP1-201ENST00000262291 SPINK1P00995 79 aa7.65□□□□□ -1.18
VMP1-201ENST00000262291 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
VMP1-201ENST00000262291 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
VMP1-201ENST00000262291 HSPG2P98160 4391 aa7.62□□□□□ -1.19
VMP1-201ENST00000262291 FLG2Q5D862 2391 aaPredicted RBP7.61□□□□□ -1.19
VMP1-201ENST00000262291 PKHD1L1Q86WI1 4243 aa7.6□□□□□ -1.19
VMP1-201ENST00000262291 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
VMP1-201ENST00000262291 Q5VSD8 79 aa7.59□□□□□ -1.19
VMP1-201ENST00000262291 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
VMP1-201ENST00000262291 C9orf92A6NGG3 77 aa7.57□□□□□ -1.2
VMP1-201ENST00000262291 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
VMP1-201ENST00000262291 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
VMP1-201ENST00000262291 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
VMP1-201ENST00000262291 A0A1B0GU69 56 aa7.55□□□□□ -1.2
VMP1-201ENST00000262291 RYR1P21817 5038 aa7.53□□□□□ -1.2
VMP1-201ENST00000262291 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.21
VMP1-201ENST00000262291 ACYP2P14621 99 aa7.52□□□□□ -1.21
VMP1-201ENST00000262291 Q8N1X5 172 aa7.52□□□□□ -1.21
VMP1-201ENST00000262291 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
VMP1-201ENST00000262291 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
VMP1-201ENST00000262291 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
VMP1-201ENST00000262291 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
VMP1-201ENST00000262291 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
VMP1-201ENST00000262291 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
VMP1-201ENST00000262291 MYCBP2O75592 4640 aa7.46□□□□□ -1.22
VMP1-201ENST00000262291 TNXBP22105 4242 aa7.46□□□□□ -1.22
VMP1-201ENST00000262291 UQCR11O14957 56 aa7.44□□□□□ -1.22
VMP1-201ENST00000262291 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
VMP1-201ENST00000262291 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms