RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
LMNB1-201ENST00000261366 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
LMNB1-201ENST00000261366 Q5W150 140 aa9.49□□□□□ -0.89
LMNB1-201ENST00000261366 WWC2-AS2Q96NR7 200 aa9.46□□□□□ -0.89
LMNB1-201ENST00000261366 PRKDCP78527 4128 aaKnown RBP9.46□□□□□ -0.89
LMNB1-201ENST00000261366 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
LMNB1-201ENST00000261366 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.9
LMNB1-201ENST00000261366 DYNC2H1Q8NCM8 4307 aaKnown RBP9.44□□□□□ -0.9
LMNB1-201ENST00000261366 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
LMNB1-201ENST00000261366 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
LMNB1-201ENST00000261366 STARD9Q9P2P6 4700 aa9.44□□□□□ -0.9
LMNB1-201ENST00000261366 DNHD1Q96M86 4753 aa9.43□□□□□ -0.9
LMNB1-201ENST00000261366 CIRBP-AS1Q8TBR5 109 aa9.43□□□□□ -0.9
LMNB1-201ENST00000261366 PLAC8Q9NZF1 115 aa9.43□□□□□ -0.9
LMNB1-201ENST00000261366 TGP01266 2768 aa9.42□□□□□ -0.9
LMNB1-201ENST00000261366 LINC00483Q53H64 154 aa9.39□□□□□ -0.91
LMNB1-201ENST00000261366 Q6ZRN7 208 aaPredicted RBP9.39□□□□□ -0.91
LMNB1-201ENST00000261366 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
LMNB1-201ENST00000261366 C7orf65Q6ZTY9 151 aa9.38□□□□□ -0.91
LMNB1-201ENST00000261366 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
LMNB1-201ENST00000261366 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
LMNB1-201ENST00000261366 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
LMNB1-201ENST00000261366 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
LMNB1-201ENST00000261366 KMT2AQ03164 3969 aa9.34□□□□□ -0.91
LMNB1-201ENST00000261366 ZNF861PO60384 105 aa9.34□□□□□ -0.92
LMNB1-201ENST00000261366 RTL8CO15255 209 aa9.33□□□□□ -0.92
LMNB1-201ENST00000261366 FBN3Q75N90 2809 aa9.32□□□□□ -0.92
LMNB1-201ENST00000261366 A0A087WTM6 91 aa9.32□□□□□ -0.92
LMNB1-201ENST00000261366 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
LMNB1-201ENST00000261366 ACYP2P14621 99 aa9.31□□□□□ -0.92
LMNB1-201ENST00000261366 LINC00313P59037 77 aa9.28□□□□□ -0.92
LMNB1-201ENST00000261366 VPS13DQ5THJ4 4388 aa9.28□□□□□ -0.92
LMNB1-201ENST00000261366 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
LMNB1-201ENST00000261366 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
LMNB1-201ENST00000261366 DNAH2Q9P225 4427 aa9.26□□□□□ -0.93
LMNB1-201ENST00000261366 A0A1B0GU69 56 aa9.25□□□□□ -0.93
LMNB1-201ENST00000261366 DNAH17Q9UFH2 4485 aa9.23□□□□□ -0.93
LMNB1-201ENST00000261366 IGKV2D-30A0A075B6S6 120 aa9.19□□□□□ -0.94
LMNB1-201ENST00000261366 IGLV7-43P04211 117 aa9.19□□□□□ -0.94
LMNB1-201ENST00000261366 IGKV2-30P06310 120 aa9.19□□□□□ -0.94
LMNB1-201ENST00000261366 DMAC1Q96GE9 116 aa9.19□□□□□ -0.94
LMNB1-201ENST00000261366 LY6G6CO95867 125 aa9.14□□□□□ -0.95
LMNB1-201ENST00000261366 FAM229AH3BQW9 127 aa9.14□□□□□ -0.95
LMNB1-201ENST00000261366 SPINK1P00995 79 aa9.14□□□□□ -0.95
LMNB1-201ENST00000261366 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
LMNB1-201ENST00000261366 C8orf87E5RJ46 101 aa9.12□□□□□ -0.95
LMNB1-201ENST00000261366 DNAH6Q9C0G6 4158 aa9.11□□□□□ -0.95
LMNB1-201ENST00000261366 MIR22HGQ0VDD5 57 aa9.11□□□□□ -0.95
LMNB1-201ENST00000261366 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
LMNB1-201ENST00000261366 UQCR11O14957 56 aa9.06□□□□□ -0.96
LMNB1-201ENST00000261366 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
LMNB1-201ENST00000261366 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
LMNB1-201ENST00000261366 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
LMNB1-201ENST00000261366 Q8N1X5 172 aa9.02□□□□□ -0.97
LMNB1-201ENST00000261366 PLA2G1BP04054 148 aaKnown RBP9.02□□□□□ -0.97
LMNB1-201ENST00000261366 DNAH11Q96DT5 4516 aa9.01□□□□□ -0.97
LMNB1-201ENST00000261366 KRTAP10-2P60368 255 aa9□□□□□ -0.97
LMNB1-201ENST00000261366 KRTAP16-1A8MUX0 517 aa8.98□□□□□ -0.97
LMNB1-201ENST00000261366 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
LMNB1-201ENST00000261366 HYDINQ4G0P3 5121 aa8.96□□□□□ -0.97
LMNB1-201ENST00000261366 CSAG1Q6PB30 78 aa8.96□□□□□ -0.97
LMNB1-201ENST00000261366 DNAH5Q8TE73 4624 aa8.96□□□□□ -0.98
LMNB1-201ENST00000261366 LRP1BQ9NZR2 4599 aa8.94□□□□□ -0.98
LMNB1-201ENST00000261366 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
LMNB1-201ENST00000261366 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
LMNB1-201ENST00000261366 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
LMNB1-201ENST00000261366 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
LMNB1-201ENST00000261366 PKD1P98161 4303 aa8.84□□□□□ -0.99
LMNB1-201ENST00000261366 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
LMNB1-201ENST00000261366 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
LMNB1-201ENST00000261366 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
LMNB1-201ENST00000261366 C9orf92A6NGG3 77 aa8.78□□□□□ -1
LMNB1-201ENST00000261366 Q6ZSA8 131 aa8.75□□□□□ -1.01
LMNB1-201ENST00000261366 H0YAA0 97 aa8.74□□□□□ -1.01
LMNB1-201ENST00000261366 KRTAP21-3Q3LHN1 58 aa8.74□□□□□ -1.01
LMNB1-201ENST00000261366 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
LMNB1-201ENST00000261366 CRIPTQ9P021 101 aa8.72□□□□□ -1.01
LMNB1-201ENST00000261366 SACSQ9NZJ4 4579 aa8.7□□□□□ -1.02
LMNB1-201ENST00000261366 H3BS24 57 aa8.69□□□□□ -1.02
LMNB1-201ENST00000261366 A0A1B0GU33 70 aa8.65□□□□□ -1.03
LMNB1-201ENST00000261366 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
LMNB1-201ENST00000261366 A8MUU9 505 aa8.63□□□□□ -1.03
LMNB1-201ENST00000261366 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
LMNB1-201ENST00000261366 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
LMNB1-201ENST00000261366 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
LMNB1-201ENST00000261366 H1FX-AS1Q4G0G2 97 aa8.55□□□□□ -1.04
LMNB1-201ENST00000261366 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
LMNB1-201ENST00000261366 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
LMNB1-201ENST00000261366 FAT1Q14517 4588 aa8.53□□□□□ -1.04
LMNB1-201ENST00000261366 KMT2CQ8NEZ4 4911 aaKnown RBP8.51□□□□□ -1.05
LMNB1-201ENST00000261366 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
LMNB1-201ENST00000261366 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
LMNB1-201ENST00000261366 A0A0D9SG42 100 aa8.43□□□□□ -1.06
LMNB1-201ENST00000261366 ROMO1P60602 79 aa8.42□□□□□ -1.06
LMNB1-201ENST00000261366 A0A1B0GVY2 172 aa8.42□□□□□ -1.06
LMNB1-201ENST00000261366 K7ERS5 55 aa8.42□□□□□ -1.06
LMNB1-201ENST00000261366 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
LMNB1-201ENST00000261366 RYR2Q92736 4967 aa8.41□□□□□ -1.06
LMNB1-201ENST00000261366 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
LMNB1-201ENST00000261366 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms