RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
SEMA6A-201ENST00000257414 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
SEMA6A-201ENST00000257414 ANK3Q12955 4377 aaKnown RBP6.02□□□□□ -1.45
SEMA6A-201ENST00000257414 Q6ZR54 194 aa6.01□□□□□ -1.45
SEMA6A-201ENST00000257414 KRTAP13-1Q8IUC0 172 aa6□□□□□ -1.45
SEMA6A-201ENST00000257414 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
SEMA6A-201ENST00000257414 A0A087X002 238 aa5.99□□□□□ -1.45
SEMA6A-201ENST00000257414 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
SEMA6A-201ENST00000257414 UQCR11O14957 56 aa5.99□□□□□ -1.45
SEMA6A-201ENST00000257414 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
SEMA6A-201ENST00000257414 SPINK7P58062 85 aa5.98□□□□□ -1.45
SEMA6A-201ENST00000257414 K7ERS5 55 aa5.97□□□□□ -1.45
SEMA6A-201ENST00000257414 TRRAPQ9Y4A5 3859 aa5.97□□□□□ -1.45
SEMA6A-201ENST00000257414 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.45
SEMA6A-201ENST00000257414 Q5W150 140 aa5.96□□□□□ -1.46
SEMA6A-201ENST00000257414 A8MU10 97 aa5.95□□□□□ -1.46
SEMA6A-201ENST00000257414 LCA10Q71F78 164 aa5.94□□□□□ -1.46
SEMA6A-201ENST00000257414 LINC00304Q8N9R0 145 aa5.92□□□□□ -1.46
SEMA6A-201ENST00000257414 AKAP9Q99996 3911 aa5.92□□□□□ -1.46
SEMA6A-201ENST00000257414 Q8N1X5 172 aa5.92□□□□□ -1.46
SEMA6A-201ENST00000257414 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
SEMA6A-201ENST00000257414 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
SEMA6A-201ENST00000257414 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
SEMA6A-201ENST00000257414 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
SEMA6A-201ENST00000257414 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
SEMA6A-201ENST00000257414 TENM2Q9NT68 2774 aa5.86□□□□□ -1.47
SEMA6A-201ENST00000257414 KRTAP10-1P60331 282 aa5.84□□□□□ -1.48
SEMA6A-201ENST00000257414 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
SEMA6A-201ENST00000257414 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
SEMA6A-201ENST00000257414 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
SEMA6A-201ENST00000257414 A6NN06 94 aa5.8□□□□□ -1.48
SEMA6A-201ENST00000257414 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
SEMA6A-201ENST00000257414 TGP01266 2768 aa5.77□□□□□ -1.49
SEMA6A-201ENST00000257414 A0A1B0GU33 70 aa5.71□□□□□ -1.5
SEMA6A-201ENST00000257414 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
SEMA6A-201ENST00000257414 DMBT1Q9UGM3 2413 aaPredicted RBP5.7□□□□□ -1.5
SEMA6A-201ENST00000257414 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
SEMA6A-201ENST00000257414 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
SEMA6A-201ENST00000257414 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.51
SEMA6A-201ENST00000257414 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
SEMA6A-201ENST00000257414 A0A0D9SG42 100 aa5.62□□□□□ -1.51
SEMA6A-201ENST00000257414 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
SEMA6A-201ENST00000257414 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
SEMA6A-201ENST00000257414 Q6ZSA8 131 aa5.6□□□□□ -1.51
SEMA6A-201ENST00000257414 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.52
SEMA6A-201ENST00000257414 COL7A1Q02388 2944 aa5.58□□□□□ -1.52
SEMA6A-201ENST00000257414 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
SEMA6A-201ENST00000257414 MEGF8Q7Z7M0 2845 aa5.57□□□□□ -1.52
SEMA6A-201ENST00000257414 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
SEMA6A-201ENST00000257414 HUWE1Q7Z6Z7 4374 aaKnown RBP5.55□□□□□ -1.52
SEMA6A-201ENST00000257414 CSMD3Q7Z407 3707 aa5.54□□□□□ -1.52
SEMA6A-201ENST00000257414 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
SEMA6A-201ENST00000257414 FLG2Q5D862 2391 aaPredicted RBP5.54□□□□□ -1.52
SEMA6A-201ENST00000257414 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
SEMA6A-201ENST00000257414 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
SEMA6A-201ENST00000257414 A8MUU9 505 aa5.48□□□□□ -1.53
SEMA6A-201ENST00000257414 S4R3F8 94 aa5.48□□□□□ -1.53
SEMA6A-201ENST00000257414 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
SEMA6A-201ENST00000257414 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
SEMA6A-201ENST00000257414 DNAH10Q8IVF4 4471 aa5.43□□□□□ -1.54
SEMA6A-201ENST00000257414 Q5VSD8 79 aa5.42□□□□□ -1.54
SEMA6A-201ENST00000257414 ROMO1P60602 79 aa5.42□□□□□ -1.54
SEMA6A-201ENST00000257414 H0YAA0 97 aa5.41□□□□□ -1.54
SEMA6A-201ENST00000257414 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
SEMA6A-201ENST00000257414 H3BS24 57 aa5.4□□□□□ -1.54
SEMA6A-201ENST00000257414 DNAH9Q9NYC9 4486 aa5.35□□□□□ -1.55
SEMA6A-201ENST00000257414 PLECQ15149 4684 aaKnown RBP5.34□□□□□ -1.56
SEMA6A-201ENST00000257414 ANK2Q01484 3957 aa5.31□□□□□ -1.56
SEMA6A-201ENST00000257414 J3QL48 77 aa5.28□□□□□ -1.56
SEMA6A-201ENST00000257414 DNAH1Q9P2D7 4330 aa5.26□□□□□ -1.57
SEMA6A-201ENST00000257414 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
SEMA6A-201ENST00000257414 R4GN34 69 aa5.24□□□□□ -1.57
SEMA6A-201ENST00000257414 XP32Q5T750 250 aa5.23□□□□□ -1.57
SEMA6A-201ENST00000257414 M0QZ58 72 aa5.22□□□□□ -1.57
SEMA6A-201ENST00000257414 DNAH3Q8TD57 4116 aa5.21□□□□□ -1.58
SEMA6A-201ENST00000257414 KRTAP21-3Q3LHN1 58 aa5.2□□□□□ -1.58
SEMA6A-201ENST00000257414 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
SEMA6A-201ENST00000257414 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
SEMA6A-201ENST00000257414 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
SEMA6A-201ENST00000257414 CMYA5Q8N3K9 4069 aa5.18□□□□□ -1.58
SEMA6A-201ENST00000257414 LYSTQ99698 3801 aa5.17□□□□□ -1.58
SEMA6A-201ENST00000257414 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
SEMA6A-201ENST00000257414 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
SEMA6A-201ENST00000257414 P0C880 135 aa5.16□□□□□ -1.58
SEMA6A-201ENST00000257414 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
SEMA6A-201ENST00000257414 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
SEMA6A-201ENST00000257414 DNAH8Q96JB1 4490 aa5.15□□□□□ -1.58
SEMA6A-201ENST00000257414 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.58
SEMA6A-201ENST00000257414 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
SEMA6A-201ENST00000257414 KMT2AQ03164 3969 aa5.07□□□□□ -1.6
SEMA6A-201ENST00000257414 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
SEMA6A-201ENST00000257414 DNAH7Q8WXX0 4024 aa5.06□□□□□ -1.6
SEMA6A-201ENST00000257414 DNAH2Q9P225 4427 aa5.06□□□□□ -1.6
SEMA6A-201ENST00000257414 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
SEMA6A-201ENST00000257414 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
SEMA6A-201ENST00000257414 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
SEMA6A-201ENST00000257414 KRTAP10-4P60372 401 aaPredicted RBP5.04□□□□□ -1.6
SEMA6A-201ENST00000257414 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
SEMA6A-201ENST00000257414 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
SEMA6A-201ENST00000257414 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms